RNA–Protein interactions for RNA: ENST00000587228.5

GPATCH8-205, Transcript of G-patch domain containing 8, humanhuman

TSL 1 (best)

Gene GPATCH8, Length 4,713 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPATCH8-205ENST00000587228 VCX2Q9H322 139 aa7.84□□□□□ -1.15
GPATCH8-205ENST00000587228 DMRTC2Q8IXT2 367 aaPredicted RBP7.83□□□□□ -1.16
GPATCH8-205ENST00000587228 ST6GALNAC6Q969X2 333 aa7.83□□□□□ -1.16
GPATCH8-205ENST00000587228 LIME1Q9H400 295 aa7.83□□□□□ -1.16
GPATCH8-205ENST00000587228 TPSG1Q9NRR2 321 aa7.83□□□□□ -1.16
GPATCH8-205ENST00000587228 PCDH15Q96QU1 1955 aa7.83□□□□□ -1.16
GPATCH8-205ENST00000587228 ZNF462Q96JM2 2506 aa7.83□□□□□ -1.16
GPATCH8-205ENST00000587228 DKK1O94907 266 aa7.83□□□□□ -1.16
GPATCH8-205ENST00000587228 NDUFA3O95167 84 aa7.83□□□□□ -1.16
GPATCH8-205ENST00000587228 CMC4P56277 68 aaPredicted RBP7.83□□□□□ -1.16
GPATCH8-205ENST00000587228 TMEM249Q2WGJ8 235 aa7.83□□□□□ -1.16
GPATCH8-205ENST00000587228 RNF166Q96A37 237 aaPredicted RBP7.83□□□□□ -1.16
GPATCH8-205ENST00000587228 A0A087WWC5 75 aa7.83□□□□□ -1.16
GPATCH8-205ENST00000587228 CD5P06127 495 aa7.83□□□□□ -1.16
GPATCH8-205ENST00000587228 IFI27P40305 119 aaPredicted RBP7.83□□□□□ -1.16
GPATCH8-205ENST00000587228 C14orf144Q96I85 54 aa7.83□□□□□ -1.16
GPATCH8-205ENST00000587228 SETD2Q9BYW2 2564 aaPredicted RBP7.83□□□□□ -1.16
GPATCH8-205ENST00000587228 A0A087WX48 190 aa7.83□□□□□ -1.16
GPATCH8-205ENST00000587228 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP7.83□□□□□ -1.16
GPATCH8-205ENST00000587228 SERF1AO75920 110 aa7.83□□□□□ -1.16
GPATCH8-205ENST00000587228 NCR2O95944 276 aa7.83□□□□□ -1.16
GPATCH8-205ENST00000587228 DDTP30046 118 aa7.83□□□□□ -1.16
GPATCH8-205ENST00000587228 FAM110DQ8TAY7 271 aaPredicted RBP7.83□□□□□ -1.16
GPATCH8-205ENST00000587228 IGFBPL1Q8WX77 278 aa7.83□□□□□ -1.16
GPATCH8-205ENST00000587228 TOMM40O96008 361 aa7.82□□□□□ -1.16
GPATCH8-205ENST00000587228 COL5A1-AS1Q5SY13 56 aa7.82□□□□□ -1.16
GPATCH8-205ENST00000587228 TSKUQ8WUA8 353 aa7.82□□□□□ -1.16
GPATCH8-205ENST00000587228 ALKBH7Q9BT30 221 aaPredicted RBP7.82□□□□□ -1.16
GPATCH8-205ENST00000587228 NACAE9PAV3 2078 aa7.82□□□□□ -1.16
GPATCH8-205ENST00000587228 DEFB130BP0DP73 79 aa7.82□□□□□ -1.16
GPATCH8-205ENST00000587228 DEFB130AP0DP74 79 aa7.82□□□□□ -1.16
GPATCH8-205ENST00000587228 HOXA5P20719 270 aa7.82□□□□□ -1.16
GPATCH8-205ENST00000587228 COTL1Q14019 142 aa7.82□□□□□ -1.16
GPATCH8-205ENST00000587228 SPRY4Q9C004 299 aa7.82□□□□□ -1.16
GPATCH8-205ENST00000587228 CTSZQ9UBR2 303 aa7.82□□□□□ -1.16
GPATCH8-205ENST00000587228 OR9G4Q8NGQ1 327 aa7.82□□□□□ -1.16
GPATCH8-205ENST00000587228 LINC00479Q96M42 142 aa7.82□□□□□ -1.16
GPATCH8-205ENST00000587228 H3BRM9 83 aa7.81□□□□□ -1.16
GPATCH8-205ENST00000587228 HOXA3O43365 443 aaPredicted RBP7.81□□□□□ -1.16
GPATCH8-205ENST00000587228 MALP21145 153 aa7.81□□□□□ -1.16
GPATCH8-205ENST00000587228 CFAP161Q6P656 301 aa7.81□□□□□ -1.16
GPATCH8-205ENST00000587228 DMRT1Q9Y5R6 373 aa7.81□□□□□ -1.16
GPATCH8-205ENST00000587228 IGHV4-61A0A0C4DH41 118 aa7.81□□□□□ -1.16
GPATCH8-205ENST00000587228 F2Z2F3 143 aa7.81□□□□□ -1.16
GPATCH8-205ENST00000587228 ADMP35318 185 aa7.81□□□□□ -1.16
GPATCH8-205ENST00000587228 SPRNQ5BIV9 151 aa7.81□□□□□ -1.16
GPATCH8-205ENST00000587228 ZNF833PQ6ZTB9 187 aa7.81□□□□□ -1.16
GPATCH8-205ENST00000587228 NRN1Q9NPD7 142 aa7.81□□□□□ -1.16
GPATCH8-205ENST00000587228 XCL2Q9UBD3 114 aa7.81□□□□□ -1.16
GPATCH8-205ENST00000587228 NCOA6Q14686 2063 aaPredicted RBP7.81□□□□□ -1.16
GPATCH8-205ENST00000587228 TRAV9-1A0A075B6T8 112 aa7.81□□□□□ -1.16
GPATCH8-205ENST00000587228 C15orf65H3BRN8 121 aa7.81□□□□□ -1.16
GPATCH8-205ENST00000587228 NDUFA4L2Q9NRX3 87 aa7.81□□□□□ -1.16
GPATCH8-205ENST00000587228 TMEM14BQ9NUH8 114 aa7.81□□□□□ -1.16
GPATCH8-205ENST00000587228 CYSLTR1Q9Y271 337 aa7.81□□□□□ -1.16
GPATCH8-205ENST00000587228 FASNP49327 2511 aaKnown RBP7.81□□□□□ -1.16
GPATCH8-205ENST00000587228 CACNG7P62955 275 aa7.81□□□□□ -1.16
GPATCH8-205ENST00000587228 ADORA2A-AS1P86434 159 aa7.81□□□□□ -1.16
GPATCH8-205ENST00000587228 ZNF876PQ49A33 203 aa7.81□□□□□ -1.16
GPATCH8-205ENST00000587228 LYZL1Q6UWQ5 148 aa7.81□□□□□ -1.16
GPATCH8-205ENST00000587228 LINC00477Q96M19 166 aa7.81□□□□□ -1.16
GPATCH8-205ENST00000587228 A0A0U1RRA0 63 aa7.8□□□□□ -1.16
GPATCH8-205ENST00000587228 ERCC8Q13216 396 aa7.8□□□□□ -1.16
GPATCH8-205ENST00000587228 UBE2DNLQ8IWF7 75 aa7.8□□□□□ -1.16
GPATCH8-205ENST00000587228 RNF182Q8N6D2 247 aa7.8□□□□□ -1.16
GPATCH8-205ENST00000587228 IGHV4-30-2A0A087WSY4 118 aa7.8□□□□□ -1.16
GPATCH8-205ENST00000587228 CRPP02741 224 aa7.8□□□□□ -1.16
GPATCH8-205ENST00000587228 JOSD1Q15040 202 aaPredicted RBP7.8□□□□□ -1.16
GPATCH8-205ENST00000587228 FAM120AOSQ5T036 256 aa7.8□□□□□ -1.16
GPATCH8-205ENST00000587228 ERASQ7Z444 233 aa7.8□□□□□ -1.16
GPATCH8-205ENST00000587228 LINC01551Q86U37 167 aa7.8□□□□□ -1.16
GPATCH8-205ENST00000587228 GAGE10A6NGK3 116 aa7.8□□□□□ -1.16
GPATCH8-205ENST00000587228 IGHV2-5P01817 119 aa7.8□□□□□ -1.16
GPATCH8-205ENST00000587228 IGHV4-59P01825 116 aa7.8□□□□□ -1.16
GPATCH8-205ENST00000587228 PPBPP02775 128 aa7.8□□□□□ -1.16
GPATCH8-205ENST00000587228 FABP2P12104 132 aa7.8□□□□□ -1.16
GPATCH8-205ENST00000587228 WT1-ASQ06250 92 aa7.8□□□□□ -1.16
GPATCH8-205ENST00000587228 SRSF8Q9BRL6 282 aaKnown RBP7.8□□□□□ -1.16
GPATCH8-205ENST00000587228 C1QTNF4Q9BXJ3 329 aa7.8□□□□□ -1.16
GPATCH8-205ENST00000587228 KAAG1Q9UBP8 84 aa7.8□□□□□ -1.16
GPATCH8-205ENST00000587228 TRAV1-1A0A0B4J248 108 aa7.8□□□□□ -1.16
GPATCH8-205ENST00000587228 J3QLI3 93 aa7.8□□□□□ -1.16
GPATCH8-205ENST00000587228 IGKV1-39P01597 117 aa7.8□□□□□ -1.16
GPATCH8-205ENST00000587228 IGKV1D-39P04432 117 aa7.8□□□□□ -1.16
GPATCH8-205ENST00000587228 SRSF1Q07955 248 aaKnown RBP eCLIP7.8□□□□□ -1.16
GPATCH8-205ENST00000587228 PSG3Q16557 428 aa7.8□□□□□ -1.16
GPATCH8-205ENST00000587228 DEFB112Q30KQ8 113 aa7.8□□□□□ -1.16
GPATCH8-205ENST00000587228 C14orf178Q8N769 122 aaPredicted RBP7.8□□□□□ -1.16
GPATCH8-205ENST00000587228 SHANK2-AS3Q9BTD1 123 aa7.8□□□□□ -1.16
GPATCH8-205ENST00000587228 CD28P10747 220 aa7.79□□□□□ -1.16
GPATCH8-205ENST00000587228 COPS9Q8WXC6 57 aa7.79□□□□□ -1.16
GPATCH8-205ENST00000587228 NCOR1P1Q9H4R4 102 aa7.79□□□□□ -1.16
GPATCH8-205ENST00000587228 LINC01619G3V211 115 aa7.79□□□□□ -1.16
GPATCH8-205ENST00000587228 SH2D1AO60880 128 aa7.79□□□□□ -1.16
GPATCH8-205ENST00000587228 INSP01308 110 aa7.79□□□□□ -1.16
GPATCH8-205ENST00000587228 LINC00614P0C842 121 aa7.79□□□□□ -1.16
GPATCH8-205ENST00000587228 CFPP27918 469 aa7.79□□□□□ -1.16
GPATCH8-205ENST00000587228 LINC00311Q8N616 119 aa7.79□□□□□ -1.16
GPATCH8-205ENST00000587228 NXT2Q9NPJ8 142 aaKnown RBP7.79□□□□□ -1.16
GPATCH8-205ENST00000587228 USP9XQ93008 2570 aaPredicted RBP7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms