RNA–Protein interactions for RNA: ENST00000586245.5

VMP1-203, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-203ENST00000586245 FAM213BQ8TBF2 198 aa10.18□□□□□ -0.78
VMP1-203ENST00000586245 AURKAIP1Q9NWT8 199 aaPredicted RBP10.18□□□□□ -0.78
VMP1-203ENST00000586245 OR11H12B2RN74 326 aa10.17□□□□□ -0.78
VMP1-203ENST00000586245 H3BQ15 152 aa10.17□□□□□ -0.78
VMP1-203ENST00000586245 H3BTX0 84 aa10.17□□□□□ -0.78
VMP1-203ENST00000586245 ISLRO14498 428 aa10.17□□□□□ -0.78
VMP1-203ENST00000586245 CXorf1O96002 111 aa10.17□□□□□ -0.78
VMP1-203ENST00000586245 OR10J4P0C629 311 aa10.17□□□□□ -0.78
VMP1-203ENST00000586245 NBEAP1P0C6P0 100 aa10.17□□□□□ -0.78
VMP1-203ENST00000586245 ARL14EPLP0DKL9 152 aa10.17□□□□□ -0.78
VMP1-203ENST00000586245 PSMB3P49720 205 aa10.17□□□□□ -0.78
VMP1-203ENST00000586245 SULT1A2P50226 295 aa10.17□□□□□ -0.78
VMP1-203ENST00000586245 ZNF726P1Q15940 193 aa10.17□□□□□ -0.78
VMP1-203ENST00000586245 BLNKQ8WV28 456 aa10.17□□□□□ -0.78
VMP1-203ENST00000586245 C17orf77Q96MU5 243 aa10.17□□□□□ -0.78
VMP1-203ENST00000586245 SLC50A1Q9BRV3 221 aa10.17□□□□□ -0.78
VMP1-203ENST00000586245 ZNF586Q9NXT0 402 aa10.17□□□□□ -0.78
VMP1-203ENST00000586245 PLA2G2EQ9NZK7 142 aa10.17□□□□□ -0.78
VMP1-203ENST00000586245 UBQLN2Q9UHD9 624 aa10.17□□□□□ -0.78
VMP1-203ENST00000586245 TRBV19A0A075B6N1 114 aa10.16□□□□□ -0.78
VMP1-203ENST00000586245 SOCS3O14543 225 aa10.16□□□□□ -0.78
VMP1-203ENST00000586245 PRB2P02812 416 aaPredicted RBP10.16□□□□□ -0.78
VMP1-203ENST00000586245 FHITP49789 147 aa10.16□□□□□ -0.78
VMP1-203ENST00000586245 DEFB131AP59861 70 aa10.16□□□□□ -0.78
VMP1-203ENST00000586245 PDE6HQ13956 83 aa10.16□□□□□ -0.78
VMP1-203ENST00000586245 ODF3L2Q3SX64 289 aa10.16□□□□□ -0.78
VMP1-203ENST00000586245 PSMG4Q5JS54 123 aa10.16□□□□□ -0.78
VMP1-203ENST00000586245 ALKAL2Q6UX46 152 aa10.16□□□□□ -0.78
VMP1-203ENST00000586245 SSX7Q7RTT5 188 aa10.16□□□□□ -0.78
VMP1-203ENST00000586245 IQCF2Q8IXL9 164 aa10.16□□□□□ -0.78
VMP1-203ENST00000586245 FAM24BQ8N5W8 94 aa10.16□□□□□ -0.78
VMP1-203ENST00000586245 FXYD5Q96DB9 178 aa10.16□□□□□ -0.78
VMP1-203ENST00000586245 ZNF503Q96F45 646 aa10.16□□□□□ -0.78
VMP1-203ENST00000586245 LINC00052Q96N35 136 aa10.16□□□□□ -0.78
VMP1-203ENST00000586245 FAM110AQ9BQ89 295 aa10.16□□□□□ -0.78
VMP1-203ENST00000586245 MAP6D1Q9H9H5 199 aa10.16□□□□□ -0.78
VMP1-203ENST00000586245 SORL1Q92673 2214 aa10.15□□□□□ -0.78
VMP1-203ENST00000586245 MAP1LC3B2A6NCE7 125 aa10.15□□□□□ -0.78
VMP1-203ENST00000586245 ZNF253O75346 499 aa10.15□□□□□ -0.78
VMP1-203ENST00000586245 H2AFB1P0C5Y9 115 aa10.15□□□□□ -0.78
VMP1-203ENST00000586245 GCHFRP30047 84 aa10.15□□□□□ -0.78
VMP1-203ENST00000586245 PSG9Q00887 426 aa10.15□□□□□ -0.78
VMP1-203ENST00000586245 FAM74A1Q5RGS3 127 aa10.15□□□□□ -0.78
VMP1-203ENST00000586245 Q8N1Y9 231 aa10.15□□□□□ -0.78
VMP1-203ENST00000586245 SAT2Q96F10 170 aaPredicted RBP10.15□□□□□ -0.78
VMP1-203ENST00000586245 MAP1LC3BQ9GZQ8 125 aa10.15□□□□□ -0.78
VMP1-203ENST00000586245 ZNF331Q9NQX6 463 aaPredicted RBP10.15□□□□□ -0.78
VMP1-203ENST00000586245 TMEM167BQ9NRX6 74 aa10.15□□□□□ -0.78
VMP1-203ENST00000586245 CLEC5AQ9NY25 188 aa10.15□□□□□ -0.78
VMP1-203ENST00000586245 SLC17A3O00476 420 aa10.14□□□□□ -0.79
VMP1-203ENST00000586245 FGF8P55075 233 aaPredicted RBP10.14□□□□□ -0.79
VMP1-203ENST00000586245 DEFB125Q8N687 156 aa10.14□□□□□ -0.79
VMP1-203ENST00000586245 SFT2D1Q8WV19 159 aa10.14□□□□□ -0.79
VMP1-203ENST00000586245 MBD3L1Q8WWY6 194 aa10.14□□□□□ -0.79
VMP1-203ENST00000586245 AAMDCQ9H7C9 122 aa10.14□□□□□ -0.79
VMP1-203ENST00000586245 C19orf73Q9NVV2 129 aa10.14□□□□□ -0.79
VMP1-203ENST00000586245 NOTCH1P46531 2555 aa10.13□□□□□ -0.79
VMP1-203ENST00000586245 TRAV8-2A0A0B4J237 113 aa10.13□□□□□ -0.79
VMP1-203ENST00000586245 ZNF705EA8MWA4 302 aaPredicted RBP10.13□□□□□ -0.79
VMP1-203ENST00000586245 TEX46H3BTG2 121 aa10.13□□□□□ -0.79
VMP1-203ENST00000586245 PSG3Q16557 428 aa10.13□□□□□ -0.79
VMP1-203ENST00000586245 IGFL4Q6B9Z1 124 aa10.13□□□□□ -0.79
VMP1-203ENST00000586245 APRG1Q8IVJ8 170 aa10.13□□□□□ -0.79
VMP1-203ENST00000586245 LYPD1Q8N2G4 141 aa10.13□□□□□ -0.79
VMP1-203ENST00000586245 RNF182Q8N6D2 247 aa10.13□□□□□ -0.79
VMP1-203ENST00000586245 WFDC10AQ9H1F0 79 aa10.13□□□□□ -0.79
VMP1-203ENST00000586245 TUBA4BQ9H853 241 aa10.13□□□□□ -0.79
VMP1-203ENST00000586245 NBEAL1Q6ZS30 2694 aa10.12□□□□□ -0.79
VMP1-203ENST00000586245 NDUFB4O95168 129 aa10.12□□□□□ -0.79
VMP1-203ENST00000586245 HBE1P02100 147 aa10.12□□□□□ -0.79
VMP1-203ENST00000586245 RANP62826 216 aaKnown RBP10.12□□□□□ -0.79
VMP1-203ENST00000586245 DEFA6Q01524 100 aa10.12□□□□□ -0.79
VMP1-203ENST00000586245 ZNF738Q8NE65 137 aa10.12□□□□□ -0.79
VMP1-203ENST00000586245 C20orf173Q96LM9 149 aa10.12□□□□□ -0.79
VMP1-203ENST00000586245 SRD5A3Q9H8P0 318 aa10.12□□□□□ -0.79
VMP1-203ENST00000586245 PRELID1Q9Y255 219 aa10.12□□□□□ -0.79
VMP1-203ENST00000586245 A0A1B0GV50 99 aa10.11□□□□□ -0.79
VMP1-203ENST00000586245 K7EIL1 84 aa10.11□□□□□ -0.79
VMP1-203ENST00000586245 IFNA7P01567 189 aa10.11□□□□□ -0.79
VMP1-203ENST00000586245 IGHV4-30-4P0DP06 118 aa10.11□□□□□ -0.79
VMP1-203ENST00000586245 HLA-DMBP28068 263 aa10.11□□□□□ -0.79
VMP1-203ENST00000586245 BLOC1S1P78537 153 aa10.11□□□□□ -0.79
VMP1-203ENST00000586245 ZNF124Q15973 351 aa10.11□□□□□ -0.79
VMP1-203ENST00000586245 DEFB121Q5J5C9 76 aa10.11□□□□□ -0.79
VMP1-203ENST00000586245 EBLN2Q6P2I7 272 aa10.11□□□□□ -0.79
VMP1-203ENST00000586245 TEX261Q6UWH6 196 aa10.11□□□□□ -0.79
VMP1-203ENST00000586245 STHQ8IWL8 128 aa10.11□□□□□ -0.79
VMP1-203ENST00000586245 EXOC3-AS1Q8N2X6 119 aa10.11□□□□□ -0.79
VMP1-203ENST00000586245 SUN5Q8TC36 379 aa10.11□□□□□ -0.79
VMP1-203ENST00000586245 MRAPQ8TCY5 172 aa10.11□□□□□ -0.79
VMP1-203ENST00000586245 MRPL53Q96EL3 112 aaKnown RBP10.11□□□□□ -0.79
VMP1-203ENST00000586245 Q9H3A6 140 aa10.11□□□□□ -0.79
VMP1-203ENST00000586245 TMPRSS5Q9H3S3 457 aa10.11□□□□□ -0.79
VMP1-203ENST00000586245 CSN1S1P47710 185 aa10.1□□□□□ -0.79
VMP1-203ENST00000586245 ICAM4Q14773 271 aa10.1□□□□□ -0.79
VMP1-203ENST00000586245 ACTL10Q5JWF8 245 aa10.1□□□□□ -0.79
VMP1-203ENST00000586245 FOXI2Q6ZQN5 318 aa10.1□□□□□ -0.79
VMP1-203ENST00000586245 RPUSD4Q96CM3 377 aaKnown RBP10.1□□□□□ -0.79
VMP1-203ENST00000586245 OTORQ9NRC9 128 aa10.1□□□□□ -0.79
VMP1-203ENST00000586245 TRAV1-1A0A0B4J248 108 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms