RNA–Protein interactions for RNA: ENST00000585594.5

NEDD4L-212, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4L, Length 220 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-212ENST00000585594 LINC00173Q6ZV60 143 aa1.32□□□□□ -2.2
NEDD4L-212ENST00000585594 MARCH3Q86UD3 253 aa1.32□□□□□ -2.2
NEDD4L-212ENST00000585594 MDP1Q86V88 176 aa1.32□□□□□ -2.2
NEDD4L-212ENST00000585594 GPHB5Q86YW7 130 aa1.32□□□□□ -2.2
NEDD4L-212ENST00000585594 ODF3L1Q8IXM7 274 aa1.32□□□□□ -2.2
NEDD4L-212ENST00000585594 ZNF843Q8N446 348 aa1.32□□□□□ -2.2
NEDD4L-212ENST00000585594 CD177Q8N6Q3 437 aa1.32□□□□□ -2.2
NEDD4L-212ENST00000585594 ZNF645Q8N7E2 425 aa1.32□□□□□ -2.2
NEDD4L-212ENST00000585594 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP1.32□□□□□ -2.2
NEDD4L-212ENST00000585594 ZNF491Q8N8L2 437 aa1.32□□□□□ -2.2
NEDD4L-212ENST00000585594 Q8N8P6 123 aa1.32□□□□□ -2.2
NEDD4L-212ENST00000585594 ZNRF1Q8ND25 227 aa1.32□□□□□ -2.2
NEDD4L-212ENST00000585594 CHCHD10Q8WYQ3 142 aaPredicted RBP1.32□□□□□ -2.2
NEDD4L-212ENST00000585594 LINC01600Q96MT4 127 aa1.32□□□□□ -2.2
NEDD4L-212ENST00000585594 CXCL16Q9H2A7 254 aa1.32□□□□□ -2.2
NEDD4L-212ENST00000585594 NHP2Q9NX24 153 aaKnown RBP1.32□□□□□ -2.2
NEDD4L-212ENST00000585594 ZNF492Q9P255 531 aa1.32□□□□□ -2.2
NEDD4L-212ENST00000585594 SPRR3Q9UBC9 169 aa1.32□□□□□ -2.2
NEDD4L-212ENST00000585594 SLC25A15Q9Y619 301 aa1.32□□□□□ -2.2
NEDD4L-212ENST00000585594 LY96Q9Y6Y9 160 aa1.32□□□□□ -2.2
NEDD4L-212ENST00000585594 SBF1O95248 1867 aa1.32□□□□□ -2.2
NEDD4L-212ENST00000585594 PTPN23Q9H3S7 1636 aa1.32□□□□□ -2.2
NEDD4L-212ENST00000585594 EIF2AK4Q9P2K8 1649 aaKnown RBP1.32□□□□□ -2.2
NEDD4L-212ENST00000585594 DENND4CQ5VZ89 1909 aa1.32□□□□□ -2.2
NEDD4L-212ENST00000585594 SCN10AQ9Y5Y9 1956 aa1.32□□□□□ -2.2
NEDD4L-212ENST00000585594 PPRC1Q5VV67 1664 aaKnown RBP1.32□□□□□ -2.2
NEDD4L-212ENST00000585594 SPHKAPQ2M3C7 1700 aa1.32□□□□□ -2.2
NEDD4L-212ENST00000585594 XRN1Q8IZH2 1706 aaKnown RBP1.32□□□□□ -2.2
NEDD4L-212ENST00000585594 SHANK3Q9BYB0 1731 aa1.32□□□□□ -2.2
NEDD4L-212ENST00000585594 FRMPD3Q5JV73 1810 aa1.31□□□□□ -2.2
NEDD4L-212ENST00000585594 DLC1Q96QB1 1528 aa1.31□□□□□ -2.2
NEDD4L-212ENST00000585594 TULP4Q9NRJ4 1543 aa1.31□□□□□ -2.2
NEDD4L-212ENST00000585594 LOXHD1Q8IVV2 1947 aa1.31□□□□□ -2.2
NEDD4L-212ENST00000585594 KIF21BO75037 1637 aa1.31□□□□□ -2.2
NEDD4L-212ENST00000585594 DNMT1P26358 1616 aaKnown RBP1.31□□□□□ -2.2
NEDD4L-212ENST00000585594 IGLV3-10A0A075B6K4 115 aa1.31□□□□□ -2.2
NEDD4L-212ENST00000585594 IGKV1-27A0A075B6S5 117 aa1.31□□□□□ -2.2
NEDD4L-212ENST00000585594 IGHV3OR15-7A0A075B7D8 119 aa1.31□□□□□ -2.2
NEDD4L-212ENST00000585594 IGLV9-49A0A0B4J1Y8 123 aa1.31□□□□□ -2.2
NEDD4L-212ENST00000585594 TRBV5-4A0A0C4DH59 114 aa1.31□□□□□ -2.2
NEDD4L-212ENST00000585594 IGKV1-8A0A0C4DH67 115 aa1.31□□□□□ -2.2
NEDD4L-212ENST00000585594 IGKV1-9A0A0C4DH69 117 aa1.31□□□□□ -2.2
NEDD4L-212ENST00000585594 MYMXA0A1B0GTQ4 84 aa1.31□□□□□ -2.2
NEDD4L-212ENST00000585594 A0A1W2PQD3 144 aa1.31□□□□□ -2.2
NEDD4L-212ENST00000585594 A6NIN4 97 aa1.31□□□□□ -2.2
NEDD4L-212ENST00000585594 CEBPZOSA8MTT3 80 aa1.31□□□□□ -2.2
NEDD4L-212ENST00000585594 IBA57-AS1B1ANH7 110 aa1.31□□□□□ -2.2
NEDD4L-212ENST00000585594 F8W735 103 aaPredicted RBP1.31□□□□□ -2.2
NEDD4L-212ENST00000585594 H3BMM0 161 aa1.31□□□□□ -2.2
NEDD4L-212ENST00000585594 H3BVH4 76 aa1.31□□□□□ -2.2
NEDD4L-212ENST00000585594 SLC25A20O43772 301 aa1.31□□□□□ -2.2
NEDD4L-212ENST00000585594 LEPROTL1O95214 131 aa1.31□□□□□ -2.2
NEDD4L-212ENST00000585594 IGHV3-9P01782 118 aa1.31□□□□□ -2.2
NEDD4L-212ENST00000585594 CCKP06307 115 aa1.31□□□□□ -2.2
NEDD4L-212ENST00000585594 PIRTP0C851 137 aa1.31□□□□□ -2.2
NEDD4L-212ENST00000585594 SLC25A16P16260 332 aa1.31□□□□□ -2.2
NEDD4L-212ENST00000585594 RNASE4P34096 147 aaKnown RBP1.31□□□□□ -2.2
NEDD4L-212ENST00000585594 CSRP3P50461 194 aa1.31□□□□□ -2.2
NEDD4L-212ENST00000585594 ZNF138P52744 262 aa1.31□□□□□ -2.2
NEDD4L-212ENST00000585594 EFNA4P52798 201 aa1.31□□□□□ -2.2
NEDD4L-212ENST00000585594 CRYBA2P53672 197 aa1.31□□□□□ -2.2
NEDD4L-212ENST00000585594 FXYD2P54710 66 aa1.31□□□□□ -2.2
NEDD4L-212ENST00000585594 HIST1H4AP62805 103 aaKnown RBP1.31□□□□□ -2.2
NEDD4L-212ENST00000585594 CCL20P78556 96 aa1.31□□□□□ -2.2
NEDD4L-212ENST00000585594 HOXA4Q00056 320 aaPredicted RBP1.31□□□□□ -2.2
NEDD4L-212ENST00000585594 RPL18Q07020 188 aaKnown RBP1.31□□□□□ -2.2
NEDD4L-212ENST00000585594 DPTQ07507 201 aa1.31□□□□□ -2.2
NEDD4L-212ENST00000585594 S100A7L2Q5SY68 101 aa1.31□□□□□ -2.2
NEDD4L-212ENST00000585594 LINC00242Q5T6M2 205 aa1.31□□□□□ -2.2
NEDD4L-212ENST00000585594 Q6P435 159 aa1.31□□□□□ -2.2
NEDD4L-212ENST00000585594 CEMP1Q6PRD7 247 aaPredicted RBP1.31□□□□□ -2.2
NEDD4L-212ENST00000585594 ZNF627Q7L945 461 aa1.31□□□□□ -2.2
NEDD4L-212ENST00000585594 SCXQ7RTU7 201 aa1.31□□□□□ -2.2
NEDD4L-212ENST00000585594 FAM72BQ86X60 149 aa1.31□□□□□ -2.2
NEDD4L-212ENST00000585594 FAM19A2Q8N3H0 131 aa1.31□□□□□ -2.2
NEDD4L-212ENST00000585594 FAM216BQ8N7L0 139 aa1.31□□□□□ -2.2
NEDD4L-212ENST00000585594 SLC25A29Q8N8R3 303 aa1.31□□□□□ -2.2
NEDD4L-212ENST00000585594 DIRC1Q969H9 104 aa1.31□□□□□ -2.2
NEDD4L-212ENST00000585594 UBE2WQ96B02 151 aa1.31□□□□□ -2.2
NEDD4L-212ENST00000585594 CHCHD1Q96BP2 118 aaKnown RBP1.31□□□□□ -2.2
NEDD4L-212ENST00000585594 SLC50A1Q9BRV3 221 aa1.31□□□□□ -2.2
NEDD4L-212ENST00000585594 ZNF747Q9BV97 191 aa1.31□□□□□ -2.2
NEDD4L-212ENST00000585594 SLC25A2Q9BXI2 301 aa1.31□□□□□ -2.2
NEDD4L-212ENST00000585594 DYNLRB1Q9NP97 96 aa1.31□□□□□ -2.2
NEDD4L-212ENST00000585594 OSTCQ9NRP0 149 aa1.31□□□□□ -2.2
NEDD4L-212ENST00000585594 TAS2R4Q9NYW5 299 aa1.31□□□□□ -2.2
NEDD4L-212ENST00000585594 IL36BQ9NZH7 164 aa1.31□□□□□ -2.2
NEDD4L-212ENST00000585594 IL36RNQ9UBH0 155 aa1.31□□□□□ -2.2
NEDD4L-212ENST00000585594 IQGAP1P46940 1657 aa1.31□□□□□ -2.2
NEDD4L-212ENST00000585594 MYO18AQ92614 2054 aaKnown RBP1.31□□□□□ -2.2
NEDD4L-212ENST00000585594 MYO10Q9HD67 2058 aa1.31□□□□□ -2.2
NEDD4L-212ENST00000585594 MON2Q7Z3U7 1717 aa1.31□□□□□ -2.2
NEDD4L-212ENST00000585594 CDC42BPBQ9Y5S2 1711 aa1.31□□□□□ -2.2
NEDD4L-212ENST00000585594 CHD2O14647 1828 aaKnown RBP1.31□□□□□ -2.2
NEDD4L-212ENST00000585594 PARP14Q460N5 1801 aa1.31□□□□□ -2.2
NEDD4L-212ENST00000585594 CCDC88AQ3V6T2 1871 aa1.31□□□□□ -2.2
NEDD4L-212ENST00000585594 COL1A1P02452 1464 aaPredicted RBP1.31□□□□□ -2.2
NEDD4L-212ENST00000585594 PTPRMP28827 1452 aa1.31□□□□□ -2.2
NEDD4L-212ENST00000585594 BAZ2AQ9UIF9 1905 aaKnown RBP1.3□□□□□ -2.2
NEDD4L-212ENST00000585594 NEXMIFQ5QGS0 1516 aa1.3□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms