RNA–Protein interactions for RNA: ENST00000585335.1

SCAMP4-209, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 5

Gene SCAMP4, Length 432 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-209ENST00000585335 DEFB125Q8N687 156 aa10.87□□□□□ -0.67
SCAMP4-209ENST00000585335 LINC00052Q96N35 136 aa10.87□□□□□ -0.67
SCAMP4-209ENST00000585335 SRD5A3Q9H8P0 318 aa10.87□□□□□ -0.67
SCAMP4-209ENST00000585335 RPRMQ9NS64 109 aa10.87□□□□□ -0.67
SCAMP4-209ENST00000585335 CLEC5AQ9NY25 188 aa10.87□□□□□ -0.67
SCAMP4-209ENST00000585335 NBEAL1Q6ZS30 2694 aa10.87□□□□□ -0.67
SCAMP4-209ENST00000585335 SOCS3O14543 225 aa10.86□□□□□ -0.67
SCAMP4-209ENST00000585335 ZNF253O75346 499 aa10.86□□□□□ -0.67
SCAMP4-209ENST00000585335 IGHV4-30-4P0DP06 118 aa10.86□□□□□ -0.67
SCAMP4-209ENST00000585335 NKX2-5P52952 324 aaPredicted RBP10.86□□□□□ -0.67
SCAMP4-209ENST00000585335 UBE2L3P68036 154 aaKnown RBP10.86□□□□□ -0.67
SCAMP4-209ENST00000585335 PDE6HQ13956 83 aa10.86□□□□□ -0.67
SCAMP4-209ENST00000585335 RPP25LQ8N5L8 163 aaKnown RBP10.86□□□□□ -0.67
SCAMP4-209ENST00000585335 FAM24BQ8N5W8 94 aa10.86□□□□□ -0.67
SCAMP4-209ENST00000585335 RNF141Q8WVD5 230 aa10.86□□□□□ -0.67
SCAMP4-209ENST00000585335 RAB24Q969Q5 203 aa10.86□□□□□ -0.67
SCAMP4-209ENST00000585335 FAM167A-AS1Q96KT0 104 aa10.86□□□□□ -0.67
SCAMP4-209ENST00000585335 C19orf73Q9NVV2 129 aa10.86□□□□□ -0.67
SCAMP4-209ENST00000585335 CTXND1A0A1B0GTU2 59 aa10.85□□□□□ -0.67
SCAMP4-209ENST00000585335 A8MZ25 164 aa10.85□□□□□ -0.67
SCAMP4-209ENST00000585335 PYYP10082 97 aa10.85□□□□□ -0.67
SCAMP4-209ENST00000585335 PSG9Q00887 426 aa10.85□□□□□ -0.67
SCAMP4-209ENST00000585335 DPPA3Q6W0C5 159 aa10.85□□□□□ -0.67
SCAMP4-209ENST00000585335 APRG1Q8IVJ8 170 aa10.85□□□□□ -0.67
SCAMP4-209ENST00000585335 BLNKQ8WV28 456 aa10.85□□□□□ -0.67
SCAMP4-209ENST00000585335 TMED6Q8WW62 240 aa10.85□□□□□ -0.67
SCAMP4-209ENST00000585335 WFDC10AQ9H1F0 79 aa10.85□□□□□ -0.67
SCAMP4-209ENST00000585335 AAMDCQ9H7C9 122 aa10.85□□□□□ -0.67
SCAMP4-209ENST00000585335 TRBV19A0A075B6N1 114 aa10.84□□□□□ -0.67
SCAMP4-209ENST00000585335 H3BQ15 152 aa10.84□□□□□ -0.67
SCAMP4-209ENST00000585335 CXorf1O96002 111 aa10.84□□□□□ -0.67
SCAMP4-209ENST00000585335 OR10J4P0C629 311 aa10.84□□□□□ -0.67
SCAMP4-209ENST00000585335 NBEAP1P0C6P0 100 aa10.84□□□□□ -0.67
SCAMP4-209ENST00000585335 RAB5CP51148 216 aa10.84□□□□□ -0.67
SCAMP4-209ENST00000585335 STHQ8IWL8 128 aa10.84□□□□□ -0.67
SCAMP4-209ENST00000585335 ZNF738Q8NE65 137 aa10.84□□□□□ -0.67
SCAMP4-209ENST00000585335 ZNF331Q9NQX6 463 aaPredicted RBP10.84□□□□□ -0.67
SCAMP4-209ENST00000585335 ZNF586Q9NXT0 402 aa10.84□□□□□ -0.67
SCAMP4-209ENST00000585335 H3BTX0 84 aa10.83□□□□□ -0.68
SCAMP4-209ENST00000585335 HMGB3O15347 200 aaKnown RBP10.83□□□□□ -0.68
SCAMP4-209ENST00000585335 SNRPCP09234 159 aaKnown RBP10.83□□□□□ -0.68
SCAMP4-209ENST00000585335 STAG3L2P0CL84 134 aa10.83□□□□□ -0.68
SCAMP4-209ENST00000585335 STAG3L3P0CL85 134 aa10.83□□□□□ -0.68
SCAMP4-209ENST00000585335 ARL14EPLP0DKL9 152 aa10.83□□□□□ -0.68
SCAMP4-209ENST00000585335 EBLN2Q6P2I7 272 aa10.83□□□□□ -0.68
SCAMP4-209ENST00000585335 IQCF2Q8IXL9 164 aa10.83□□□□□ -0.68
SCAMP4-209ENST00000585335 FAM213BQ8TBF2 198 aa10.83□□□□□ -0.68
SCAMP4-209ENST00000585335 FXYD5Q96DB9 178 aa10.83□□□□□ -0.68
SCAMP4-209ENST00000585335 PHYHIPLQ96FC7 376 aa10.83□□□□□ -0.68
SCAMP4-209ENST00000585335 C17orf77Q96MU5 243 aa10.83□□□□□ -0.68
SCAMP4-209ENST00000585335 TMEM167BQ9NRX6 74 aa10.83□□□□□ -0.68
SCAMP4-209ENST00000585335 PRELID1Q9Y255 219 aa10.83□□□□□ -0.68
SCAMP4-209ENST00000585335 LOC102724200A0A096LPH7 203 aaPredicted RBP10.82□□□□□ -0.68
SCAMP4-209ENST00000585335 MAP1LC3B2A6NCE7 125 aa10.82□□□□□ -0.68
SCAMP4-209ENST00000585335 FRMD6-AS1P0C7T7 363 aa10.82□□□□□ -0.68
SCAMP4-209ENST00000585335 PSG3Q16557 428 aa10.82□□□□□ -0.68
SCAMP4-209ENST00000585335 ACTL10Q5JWF8 245 aa10.82□□□□□ -0.68
SCAMP4-209ENST00000585335 FOXI2Q6ZQN5 318 aa10.82□□□□□ -0.68
SCAMP4-209ENST00000585335 LYPD1Q8N2G4 141 aa10.82□□□□□ -0.68
SCAMP4-209ENST00000585335 RNF182Q8N6D2 247 aa10.82□□□□□ -0.68
SCAMP4-209ENST00000585335 SAT2Q96F10 170 aaPredicted RBP10.82□□□□□ -0.68
SCAMP4-209ENST00000585335 MAP1LC3BQ9GZQ8 125 aa10.82□□□□□ -0.68
SCAMP4-209ENST00000585335 TRAV8-2A0A0B4J237 113 aa10.81□□□□□ -0.68
SCAMP4-209ENST00000585335 SLC17A3O00476 420 aa10.81□□□□□ -0.68
SCAMP4-209ENST00000585335 GCHFRP30047 84 aa10.81□□□□□ -0.68
SCAMP4-209ENST00000585335 APOC4P55056 127 aa10.81□□□□□ -0.68
SCAMP4-209ENST00000585335 FAM74A1Q5RGS3 127 aa10.81□□□□□ -0.68
SCAMP4-209ENST00000585335 IGFL4Q6B9Z1 124 aa10.81□□□□□ -0.68
SCAMP4-209ENST00000585335 MRPL53Q96EL3 112 aaKnown RBP10.81□□□□□ -0.68
SCAMP4-209ENST00000585335 ZNF503Q96F45 646 aa10.81□□□□□ -0.68
SCAMP4-209ENST00000585335 KNCNA6PVL3 124 aa10.8□□□□□ -0.68
SCAMP4-209ENST00000585335 TEX46H3BTG2 121 aa10.8□□□□□ -0.68
SCAMP4-209ENST00000585335 BOLA2-SMG1P6H3BVE0 249 aa10.8□□□□□ -0.68
SCAMP4-209ENST00000585335 EIF3GO75821 320 aaKnown RBP eCLIP10.8□□□□□ -0.68
SCAMP4-209ENST00000585335 DUSP14O95147 198 aaKnown RBP10.8□□□□□ -0.68
SCAMP4-209ENST00000585335 ZNF726P1Q15940 193 aa10.8□□□□□ -0.68
SCAMP4-209ENST00000585335 ZNF124Q15973 351 aa10.8□□□□□ -0.68
SCAMP4-209ENST00000585335 RPUSD4Q96CM3 377 aaKnown RBP10.8□□□□□ -0.68
SCAMP4-209ENST00000585335 C20orf173Q96LM9 149 aa10.8□□□□□ -0.68
SCAMP4-209ENST00000585335 CITED4Q96RK1 184 aa10.8□□□□□ -0.68
SCAMP4-209ENST00000585335 SAV1Q9H4B6 383 aaPredicted RBP10.8□□□□□ -0.68
SCAMP4-209ENST00000585335 RBMY1BA6NDE4 496 aaKnown RBP10.79□□□□□ -0.68
SCAMP4-209ENST00000585335 RBMY1EA6NEQ0 496 aaKnown RBP10.79□□□□□ -0.68
SCAMP4-209ENST00000585335 NDUFB4O95168 129 aa10.79□□□□□ -0.68
SCAMP4-209ENST00000585335 RBMY1DP0C7P1 496 aaKnown RBP10.79□□□□□ -0.68
SCAMP4-209ENST00000585335 HLA-DRB4P13762 266 aa10.79□□□□□ -0.68
SCAMP4-209ENST00000585335 RPL35AP18077 110 aaKnown RBP10.79□□□□□ -0.68
SCAMP4-209ENST00000585335 CSN1S1P47710 185 aa10.79□□□□□ -0.68
SCAMP4-209ENST00000585335 SULT1A2P50226 295 aa10.79□□□□□ -0.68
SCAMP4-209ENST00000585335 NUTF2P61970 127 aaKnown RBP10.79□□□□□ -0.68
SCAMP4-209ENST00000585335 RANP62826 216 aaKnown RBP10.79□□□□□ -0.68
SCAMP4-209ENST00000585335 SSX7Q7RTT5 188 aa10.79□□□□□ -0.68
SCAMP4-209ENST00000585335 SFT2D1Q8WV19 159 aa10.79□□□□□ -0.68
SCAMP4-209ENST00000585335 B9D2Q9BPU9 175 aa10.79□□□□□ -0.68
SCAMP4-209ENST00000585335 BOLA1Q9Y3E2 137 aa10.79□□□□□ -0.68
SCAMP4-209ENST00000585335 HLA-DRB4X5D2U9 266 aa10.79□□□□□ -0.68
SCAMP4-209ENST00000585335 KIR2DL5BA0A0G2JN68 375 aa10.78□□□□□ -0.68
SCAMP4-209ENST00000585335 KIR2DL5BA0A0G2JPC4 375 aa10.78□□□□□ -0.68
SCAMP4-209ENST00000585335 H2AFB1P0C5Y9 115 aa10.78□□□□□ -0.68
SCAMP4-209ENST00000585335 HLA-DMBP28068 263 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms