RNA–Protein interactions for RNA: ENST00000584913.1

CSNK1D-225, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 295 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-225ENST00000584913 GNPNAT1Q96EK6 184 aaPredicted RBP12.23□□□□□ -0.45
CSNK1D-225ENST00000584913 SLC25A32Q9H2D1 315 aa12.23□□□□□ -0.45
CSNK1D-225ENST00000584913 HRH4Q9H3N8 390 aa12.23□□□□□ -0.45
CSNK1D-225ENST00000584913 SMCO3A2RU48 225 aa12.22□□□□□ -0.45
CSNK1D-225ENST00000584913 KNCNA6PVL3 124 aa12.22□□□□□ -0.45
CSNK1D-225ENST00000584913 H3BRN7 92 aa12.22□□□□□ -0.45
CSNK1D-225ENST00000584913 CLLU1Q5K131 121 aa12.22□□□□□ -0.45
CSNK1D-225ENST00000584913 SAV1Q9H4B6 383 aaPredicted RBP12.22□□□□□ -0.45
CSNK1D-225ENST00000584913 UQCC1Q9NVA1 299 aa12.22□□□□□ -0.45
CSNK1D-225ENST00000584913 DNAH1Q9P2D7 4330 aa12.22□□□□□ -0.45
CSNK1D-225ENST00000584913 ALMS1Q8TCU4 4167 aa12.21□□□□□ -0.45
CSNK1D-225ENST00000584913 CSNK1G2-AS1Q8NCQ2 148 aa12.21□□□□□ -0.45
CSNK1D-225ENST00000584913 SHANK2-AS3Q9BTD1 123 aa12.21□□□□□ -0.45
CSNK1D-225ENST00000584913 HIGD1AQ9Y241 93 aa12.21□□□□□ -0.45
CSNK1D-225ENST00000584913 HYPMO75409 117 aa12.2□□□□□ -0.46
CSNK1D-225ENST00000584913 LINC00869P0C866 280 aa12.2□□□□□ -0.46
CSNK1D-225ENST00000584913 RPL7P18124 248 aaKnown RBP12.2□□□□□ -0.46
CSNK1D-225ENST00000584913 ORM2P19652 201 aa12.2□□□□□ -0.46
CSNK1D-225ENST00000584913 CEMP1Q6PRD7 247 aaPredicted RBP12.2□□□□□ -0.46
CSNK1D-225ENST00000584913 Q8NAQ8 132 aa12.2□□□□□ -0.46
CSNK1D-225ENST00000584913 HSD17B11Q8NBQ5 300 aa12.2□□□□□ -0.46
CSNK1D-225ENST00000584913 SCGB1C1Q8TD33 95 aa12.2□□□□□ -0.46
CSNK1D-225ENST00000584913 RNF141Q8WVD5 230 aa12.2□□□□□ -0.46
CSNK1D-225ENST00000584913 TMED6Q8WW62 240 aa12.2□□□□□ -0.46
CSNK1D-225ENST00000584913 PSMG3Q9BT73 122 aaPredicted RBP12.2□□□□□ -0.46
CSNK1D-225ENST00000584913 SLC25A39Q9BZJ4 359 aaPredicted RBP12.2□□□□□ -0.46
CSNK1D-225ENST00000584913 WDR61Q9GZS3 305 aaKnown RBP12.2□□□□□ -0.46
CSNK1D-225ENST00000584913 RPRMQ9NS64 109 aa12.2□□□□□ -0.46
CSNK1D-225ENST00000584913 KLK5Q9Y337 293 aaPredicted RBP12.2□□□□□ -0.46
CSNK1D-225ENST00000584913 TIMM9Q9Y5J7 89 aa12.2□□□□□ -0.46
CSNK1D-225ENST00000584913 A0A087X0K7 114 aa12.19□□□□□ -0.46
CSNK1D-225ENST00000584913 UBE2L5PA0A1B0GUS4 154 aa12.19□□□□□ -0.46
CSNK1D-225ENST00000584913 CXorf65A6NEN9 183 aa12.19□□□□□ -0.46
CSNK1D-225ENST00000584913 A8MTW9 85 aa12.19□□□□□ -0.46
CSNK1D-225ENST00000584913 MPDU1O75352 247 aa12.19□□□□□ -0.46
CSNK1D-225ENST00000584913 ATP6V0CP27449 155 aa12.19□□□□□ -0.46
CSNK1D-225ENST00000584913 SULT1A2P50226 295 aa12.19□□□□□ -0.46
CSNK1D-225ENST00000584913 RAB5CP51148 216 aa12.19□□□□□ -0.46
CSNK1D-225ENST00000584913 TMEM182Q6ZP80 229 aaPredicted RBP12.19□□□□□ -0.46
CSNK1D-225ENST00000584913 UMAD1C9J7I0 102 aa12.18□□□□□ -0.46
CSNK1D-225ENST00000584913 GATA2P23769 480 aaPredicted RBP12.18□□□□□ -0.46
CSNK1D-225ENST00000584913 NEU1Q99519 415 aa12.18□□□□□ -0.46
CSNK1D-225ENST00000584913 SLC25A22Q9H936 323 aa12.18□□□□□ -0.46
CSNK1D-225ENST00000584913 WDR83OSQ9Y284 106 aa12.18□□□□□ -0.46
CSNK1D-225ENST00000584913 TENM2Q9NT68 2774 aa12.18□□□□□ -0.46
CSNK1D-225ENST00000584913 PLECQ15149 4684 aaKnown RBP12.17□□□□□ -0.46
CSNK1D-225ENST00000584913 ELOA3CA0A087WX78 387 aaPredicted RBP12.17□□□□□ -0.46
CSNK1D-225ENST00000584913 NMBP08949 121 aa12.17□□□□□ -0.46
CSNK1D-225ENST00000584913 TCTAP57738 103 aa12.17□□□□□ -0.46
CSNK1D-225ENST00000584913 RAB31Q13636 194 aa12.17□□□□□ -0.46
CSNK1D-225ENST00000584913 FAM74A1Q5RGS3 127 aa12.17□□□□□ -0.46
CSNK1D-225ENST00000584913 EBLN2Q6P2I7 272 aa12.17□□□□□ -0.46
CSNK1D-225ENST00000584913 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.17□□□□□ -0.46
CSNK1D-225ENST00000584913 C11orf45Q8TAV5 145 aa12.17□□□□□ -0.46
CSNK1D-225ENST00000584913 SAT2Q96F10 170 aaPredicted RBP12.17□□□□□ -0.46
CSNK1D-225ENST00000584913 C16orf92Q96LL3 132 aa12.17□□□□□ -0.46
CSNK1D-225ENST00000584913 X6R8D5 127 aa12.17□□□□□ -0.46
CSNK1D-225ENST00000584913 A0A0J9YX75 114 aa12.16□□□□□ -0.46
CSNK1D-225ENST00000584913 SMIM9A6NGZ8 99 aa12.16□□□□□ -0.46
CSNK1D-225ENST00000584913 C17orf112F2Z3M2 114 aa12.16□□□□□ -0.46
CSNK1D-225ENST00000584913 AGPAT2O15120 278 aa12.16□□□□□ -0.46
CSNK1D-225ENST00000584913 FGF7P21781 194 aa12.16□□□□□ -0.46
CSNK1D-225ENST00000584913 SERF2P84101 59 aa12.16□□□□□ -0.46
CSNK1D-225ENST00000584913 ZNF705AQ6ZN79 300 aaPredicted RBP12.16□□□□□ -0.46
CSNK1D-225ENST00000584913 OR2G3Q8NGZ4 309 aa12.16□□□□□ -0.46
CSNK1D-225ENST00000584913 C17orf77Q96MU5 243 aa12.16□□□□□ -0.46
CSNK1D-225ENST00000584913 RSG1Q9BU20 258 aa12.16□□□□□ -0.46
CSNK1D-225ENST00000584913 SCRT1Q9BWW7 348 aa12.16□□□□□ -0.46
CSNK1D-225ENST00000584913 SH3BGRL3Q9H299 93 aa12.16□□□□□ -0.46
CSNK1D-225ENST00000584913 KCNIP2Q9NS61 270 aa12.16□□□□□ -0.46
CSNK1D-225ENST00000584913 LINC00862A6NCI5 91 aa12.15□□□□□ -0.46
CSNK1D-225ENST00000584913 C11orf94C9JXX5 98 aa12.15□□□□□ -0.46
CSNK1D-225ENST00000584913 AMBPP02760 352 aa12.15□□□□□ -0.46
CSNK1D-225ENST00000584913 OR5G3P0C626 314 aa12.15□□□□□ -0.46
CSNK1D-225ENST00000584913 BLOC1S1P78537 153 aa12.15□□□□□ -0.46
CSNK1D-225ENST00000584913 PMS2P11Q13670 270 aa12.15□□□□□ -0.46
CSNK1D-225ENST00000584913 DPPA3Q6W0C5 159 aa12.15□□□□□ -0.46
CSNK1D-225ENST00000584913 PHLDA1Q8WV24 401 aaPredicted RBP12.15□□□□□ -0.46
CSNK1D-225ENST00000584913 LINC00052Q96N35 136 aa12.15□□□□□ -0.46
CSNK1D-225ENST00000584913 MGST2Q99735 147 aa12.15□□□□□ -0.46
CSNK1D-225ENST00000584913 MED9Q9NWA0 146 aa12.15□□□□□ -0.46
CSNK1D-225ENST00000584913 DOK5Q9P104 306 aa12.15□□□□□ -0.46
CSNK1D-225ENST00000584913 IGHV4-28A0A0C4DH34 117 aa12.14□□□□□ -0.47
CSNK1D-225ENST00000584913 TMEM189A5PLL7 270 aa12.14□□□□□ -0.47
CSNK1D-225ENST00000584913 ZNF705FA8MVS1 300 aaPredicted RBP12.14□□□□□ -0.47
CSNK1D-225ENST00000584913 ZNF705DP0CH99 300 aaPredicted RBP12.14□□□□□ -0.47
CSNK1D-225ENST00000584913 ZNF705BP0CI00 300 aaPredicted RBP12.14□□□□□ -0.47
CSNK1D-225ENST00000584913 CAMLGP49069 296 aa12.14□□□□□ -0.47
CSNK1D-225ENST00000584913 ZNF709Q8N972 641 aa12.14□□□□□ -0.47
CSNK1D-225ENST00000584913 NPCDR1Q9BY65 106 aa12.14□□□□□ -0.47
CSNK1D-225ENST00000584913 CLEC5AQ9NY25 188 aa12.14□□□□□ -0.47
CSNK1D-225ENST00000584913 MRPS12O15235 138 aaKnown RBP12.13□□□□□ -0.47
CSNK1D-225ENST00000584913 DUSP14O95147 198 aaKnown RBP12.13□□□□□ -0.47
CSNK1D-225ENST00000584913 PRR20EP86478 221 aa12.13□□□□□ -0.47
CSNK1D-225ENST00000584913 PRR20CP86479 221 aa12.13□□□□□ -0.47
CSNK1D-225ENST00000584913 PRR20DP86480 221 aa12.13□□□□□ -0.47
CSNK1D-225ENST00000584913 PRR20BP86481 221 aa12.13□□□□□ -0.47
CSNK1D-225ENST00000584913 PRR20AP86496 221 aa12.13□□□□□ -0.47
CSNK1D-225ENST00000584913 PSG9Q00887 426 aa12.13□□□□□ -0.47
CSNK1D-225ENST00000584913 AKR1C8PQ5T2L2 129 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms