RNA–Protein interactions for RNA: ENST00000584897.5

SMCHD1-211, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 4,143 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-211ENST00000584897 CENPVL3A0A0U1RRI6 287 aa1.4□□□□□ -2.19
SMCHD1-211ENST00000584897 ZNF736B4DX44 427 aaPredicted RBP1.4□□□□□ -2.19
SMCHD1-211ENST00000584897 C9JQL5 133 aa1.4□□□□□ -2.19
SMCHD1-211ENST00000584897 H3BP45 60 aa1.4□□□□□ -2.19
SMCHD1-211ENST00000584897 C15orf65H3BRN8 121 aa1.4□□□□□ -2.19
SMCHD1-211ENST00000584897 K7EPK0 472 aa1.4□□□□□ -2.19
SMCHD1-211ENST00000584897 SYNGR1O43759 233 aa1.4□□□□□ -2.19
SMCHD1-211ENST00000584897 CXorf1O96002 111 aa1.4□□□□□ -2.19
SMCHD1-211ENST00000584897 CFC1BP0CG36 223 aa1.4□□□□□ -2.19
SMCHD1-211ENST00000584897 CFC1P0CG37 223 aa1.4□□□□□ -2.19
SMCHD1-211ENST00000584897 SPCS3P61009 180 aa1.4□□□□□ -2.19
SMCHD1-211ENST00000584897 CLEC19AQ6UXS0 136 aa1.4□□□□□ -2.19
SMCHD1-211ENST00000584897 TMEM256Q8N2U0 113 aa1.4□□□□□ -2.19
SMCHD1-211ENST00000584897 C3orf56Q8N813 242 aa1.4□□□□□ -2.19
SMCHD1-211ENST00000584897 WFDC9Q8NEX5 89 aa1.4□□□□□ -2.19
SMCHD1-211ENST00000584897 MRPL30Q8TCC3 161 aaKnown RBP1.4□□□□□ -2.19
SMCHD1-211ENST00000584897 MYOZ3Q8TDC0 251 aa1.4□□□□□ -2.19
SMCHD1-211ENST00000584897 RTN4IP1Q8WWV3 396 aaPredicted RBP1.4□□□□□ -2.19
SMCHD1-211ENST00000584897 ADAT3Q96EY9 351 aaPredicted RBP1.4□□□□□ -2.19
SMCHD1-211ENST00000584897 CAMK2N2Q96S95 79 aa1.4□□□□□ -2.19
SMCHD1-211ENST00000584897 PAXXQ9BUH6 204 aa1.4□□□□□ -2.19
SMCHD1-211ENST00000584897 ATG5Q9H1Y0 275 aa1.4□□□□□ -2.19
SMCHD1-211ENST00000584897 CTNNBIP1Q9NSA3 81 aaPredicted RBP1.4□□□□□ -2.19
SMCHD1-211ENST00000584897 LYRM2Q9NU23 88 aaPredicted RBP1.4□□□□□ -2.19
SMCHD1-211ENST00000584897 PRO0628Q9UI54 55 aa1.4□□□□□ -2.19
SMCHD1-211ENST00000584897 RBM7Q9Y580 266 aaKnown RBP1.4□□□□□ -2.19
SMCHD1-211ENST00000584897 ZGRF1Q86YA3 2104 aa1.4□□□□□ -2.19
SMCHD1-211ENST00000584897 A0A087X002 238 aa1.4□□□□□ -2.19
SMCHD1-211ENST00000584897 IGHV3-74A0A0B4J1X5 117 aa1.4□□□□□ -2.19
SMCHD1-211ENST00000584897 IGKV1D-13A0A0B4J2D9 117 aa1.4□□□□□ -2.19
SMCHD1-211ENST00000584897 H7C1C5 153 aa1.4□□□□□ -2.19
SMCHD1-211ENST00000584897 TAAR5O14804 337 aa1.4□□□□□ -2.19
SMCHD1-211ENST00000584897 IGHV3-48P01763 117 aa1.4□□□□□ -2.19
SMCHD1-211ENST00000584897 HBZP02008 142 aa1.4□□□□□ -2.19
SMCHD1-211ENST00000584897 NMBP08949 121 aa1.4□□□□□ -2.19
SMCHD1-211ENST00000584897 IGKV1-13P0DP09 117 aa1.4□□□□□ -2.19
SMCHD1-211ENST00000584897 GNRHRP30968 328 aa1.4□□□□□ -2.19
SMCHD1-211ENST00000584897 AQP4P55087 323 aa1.4□□□□□ -2.19
SMCHD1-211ENST00000584897 RAB2AP61019 212 aa1.4□□□□□ -2.19
SMCHD1-211ENST00000584897 RPS11P62280 158 aaKnown RBP eCLIP1.4□□□□□ -2.19
SMCHD1-211ENST00000584897 RPL23P62829 140 aaKnown RBP1.4□□□□□ -2.19
SMCHD1-211ENST00000584897 ZNF726P1Q15940 193 aa1.4□□□□□ -2.19
SMCHD1-211ENST00000584897 LGALSLQ3ZCW2 172 aaPredicted RBP1.4□□□□□ -2.19
SMCHD1-211ENST00000584897 DPPA3Q6W0C5 159 aa1.4□□□□□ -2.19
SMCHD1-211ENST00000584897 FA2HQ7L5A8 372 aa1.4□□□□□ -2.19
SMCHD1-211ENST00000584897 GPHB5Q86YW7 130 aa1.4□□□□□ -2.19
SMCHD1-211ENST00000584897 OR4K15Q8NH41 348 aa1.4□□□□□ -2.19
SMCHD1-211ENST00000584897 TYMSOSQ8TAI1 123 aa1.4□□□□□ -2.19
SMCHD1-211ENST00000584897 FRZBQ92765 325 aa1.4□□□□□ -2.19
SMCHD1-211ENST00000584897 SDHCQ99643 169 aaPredicted RBP1.4□□□□□ -2.19
SMCHD1-211ENST00000584897 COMMD5Q9GZQ3 224 aa1.4□□□□□ -2.19
SMCHD1-211ENST00000584897 TAF9BQ9HBM6 251 aa1.4□□□□□ -2.19
SMCHD1-211ENST00000584897 CCL28Q9NRJ3 127 aa1.4□□□□□ -2.19
SMCHD1-211ENST00000584897 MRPL27Q9P0M9 148 aaKnown RBP1.4□□□□□ -2.19
SMCHD1-211ENST00000584897 ESPL1Q14674 2120 aa1.4□□□□□ -2.19
SMCHD1-211ENST00000584897 MED12LQ86YW9 2145 aa1.4□□□□□ -2.19
SMCHD1-211ENST00000584897 GOLGA4Q13439 2230 aaKnown RBP1.4□□□□□ -2.19
SMCHD1-211ENST00000584897 GTF3C1Q12789 2109 aa1.39□□□□□ -2.19
SMCHD1-211ENST00000584897 IGHV1-3A0A0C4DH29 117 aa1.39□□□□□ -2.19
SMCHD1-211ENST00000584897 SMIM9A6NGZ8 99 aa1.39□□□□□ -2.19
SMCHD1-211ENST00000584897 A8MWP6 167 aa1.39□□□□□ -2.19
SMCHD1-211ENST00000584897 FAM25AB3EWG3 89 aa1.39□□□□□ -2.19
SMCHD1-211ENST00000584897 FAM25CB3EWG5 89 aa1.39□□□□□ -2.19
SMCHD1-211ENST00000584897 FAM25GB3EWG6 89 aa1.39□□□□□ -2.19
SMCHD1-211ENST00000584897 C17orf112F2Z3M2 114 aa1.39□□□□□ -2.19
SMCHD1-211ENST00000584897 NDUFA4O00483 81 aa1.39□□□□□ -2.19
SMCHD1-211ENST00000584897 MAGEB4O15481 346 aaPredicted RBP1.39□□□□□ -2.19
SMCHD1-211ENST00000584897 ADAP1O75689 374 aa1.39□□□□□ -2.19
SMCHD1-211ENST00000584897 HLA-AP01891 365 aaKnown RBP1.39□□□□□ -2.19
SMCHD1-211ENST00000584897 GYPAP02724 150 aa1.39□□□□□ -2.19
SMCHD1-211ENST00000584897 ORM1P02763 201 aa1.39□□□□□ -2.19
SMCHD1-211ENST00000584897 MAS1P04201 325 aa1.39□□□□□ -2.19
SMCHD1-211ENST00000584897 MRPL3P09001 348 aaKnown RBP1.39□□□□□ -2.19
SMCHD1-211ENST00000584897 LGALS1P09382 135 aaKnown RBP1.39□□□□□ -2.19
SMCHD1-211ENST00000584897 EDDM3BP56851 147 aa1.39□□□□□ -2.19
SMCHD1-211ENST00000584897 SYNJ2BPP57105 145 aa1.39□□□□□ -2.19
SMCHD1-211ENST00000584897 YPEL3P61236 119 aaPredicted RBP1.39□□□□□ -2.19
SMCHD1-211ENST00000584897 PSG5Q15238 335 aa1.39□□□□□ -2.19
SMCHD1-211ENST00000584897 TAF9Q16594 264 aa1.39□□□□□ -2.19
SMCHD1-211ENST00000584897 GCSAMLQ5JQS6 135 aa1.39□□□□□ -2.19
SMCHD1-211ENST00000584897 ACTL10Q5JWF8 245 aa1.39□□□□□ -2.19
SMCHD1-211ENST00000584897 STPG2Q8N412 459 aa1.39□□□□□ -2.19
SMCHD1-211ENST00000584897 OR1P1Q8NH06 330 aa1.39□□□□□ -2.19
SMCHD1-211ENST00000584897 YPEL4Q96NS1 127 aa1.39□□□□□ -2.19
SMCHD1-211ENST00000584897 ODF3Q96PU9 254 aa1.39□□□□□ -2.19
SMCHD1-211ENST00000584897 CCL13Q99616 98 aa1.39□□□□□ -2.19
SMCHD1-211ENST00000584897 NABP2Q9BQ15 211 aa1.39□□□□□ -2.19
SMCHD1-211ENST00000584897 MARVELD1Q9BSK0 173 aa1.39□□□□□ -2.19
SMCHD1-211ENST00000584897 GFRA4Q9GZZ7 299 aa1.39□□□□□ -2.19
SMCHD1-211ENST00000584897 KLF12Q9Y4X4 402 aa1.39□□□□□ -2.19
SMCHD1-211ENST00000584897 TMEM56-RWDD3S4R434 201 aa1.39□□□□□ -2.19
SMCHD1-211ENST00000584897 MTORP42345 2549 aa1.39□□□□□ -2.19
SMCHD1-211ENST00000584897 CCDC168Q8NDH2 2452 aa1.39□□□□□ -2.19
SMCHD1-211ENST00000584897 FAT2Q9NYQ8 4349 aa1.39□□□□□ -2.19
SMCHD1-211ENST00000584897 IGLV11-55A0A075B6I3 123 aa1.39□□□□□ -2.19
SMCHD1-211ENST00000584897 RBFOX3A6NFN3 312 aa1.39□□□□□ -2.19
SMCHD1-211ENST00000584897 OR4C46A6NHA9 309 aa1.39□□□□□ -2.19
SMCHD1-211ENST00000584897 ANGPTL7O43827 346 aa1.39□□□□□ -2.19
SMCHD1-211ENST00000584897 CYB5R3P00387 301 aaPredicted RBP1.39□□□□□ -2.19
SMCHD1-211ENST00000584897 IGHV3-23P01764 117 aa1.39□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms