RNA–Protein interactions for RNA: ENST00000584541.1

RFFL-211, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-211ENST00000584541 GCHFRP30047 84 aa13.76□□□□□ -0.21
RFFL-211ENST00000584541 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.76□□□□□ -0.21
RFFL-211ENST00000584541 SAT2Q96F10 170 aaPredicted RBP13.76□□□□□ -0.21
RFFL-211ENST00000584541 TMEM167BQ9NRX6 74 aa13.76□□□□□ -0.21
RFFL-211ENST00000584541 H3BQ15 152 aa13.75□□□□□ -0.21
RFFL-211ENST00000584541 ID1P41134 155 aa13.75□□□□□ -0.21
RFFL-211ENST00000584541 FGF8P55075 233 aaPredicted RBP13.75□□□□□ -0.21
RFFL-211ENST00000584541 BLNKQ8WV28 456 aa13.75□□□□□ -0.21
RFFL-211ENST00000584541 FXYD5Q96DB9 178 aa13.75□□□□□ -0.21
RFFL-211ENST00000584541 ZNF503Q96F45 646 aa13.75□□□□□ -0.21
RFFL-211ENST00000584541 C16orf92Q96LL3 132 aa13.75□□□□□ -0.21
RFFL-211ENST00000584541 ZNF586Q9NXT0 402 aa13.75□□□□□ -0.21
RFFL-211ENST00000584541 VWFP04275 2813 aa13.74□□□□□ -0.21
RFFL-211ENST00000584541 K7EQG2 157 aa13.74□□□□□ -0.21
RFFL-211ENST00000584541 SNRPCP09234 159 aaKnown RBP13.74□□□□□ -0.21
RFFL-211ENST00000584541 PDE6HQ13956 83 aa13.74□□□□□ -0.21
RFFL-211ENST00000584541 DCANP1Q8TF63 244 aa13.74□□□□□ -0.21
RFFL-211ENST00000584541 SLC50A1Q9BRV3 221 aa13.74□□□□□ -0.21
RFFL-211ENST00000584541 TRBV19A0A075B6N1 114 aa13.73□□□□□ -0.21
RFFL-211ENST00000584541 G3V4G9 280 aa13.73□□□□□ -0.21
RFFL-211ENST00000584541 H3BTX0 84 aa13.73□□□□□ -0.21
RFFL-211ENST00000584541 ZNF253O75346 499 aa13.73□□□□□ -0.21
RFFL-211ENST00000584541 CMC4P56277 68 aaPredicted RBP13.73□□□□□ -0.21
RFFL-211ENST00000584541 SNRPD3P62318 126 aaKnown RBP13.73□□□□□ -0.21
RFFL-211ENST00000584541 PSG9Q00887 426 aa13.73□□□□□ -0.21
RFFL-211ENST00000584541 SAMD5Q5TGI4 173 aa13.73□□□□□ -0.21
RFFL-211ENST00000584541 ZNF767PQ75MW2 155 aa13.73□□□□□ -0.21
RFFL-211ENST00000584541 ZNF256Q9Y2P7 627 aaPredicted RBP13.73□□□□□ -0.21
RFFL-211ENST00000584541 TRRAPQ9Y4A5 3859 aa13.72□□□□□ -0.21
RFFL-211ENST00000584541 TRAV1-1A0A0B4J248 108 aa13.72□□□□□ -0.21
RFFL-211ENST00000584541 A0A1B0GV50 99 aa13.72□□□□□ -0.21
RFFL-211ENST00000584541 ISLRO14498 428 aa13.72□□□□□ -0.21
RFFL-211ENST00000584541 PSMB3P49720 205 aa13.72□□□□□ -0.21
RFFL-211ENST00000584541 GTSCR1Q86UQ5 136 aa13.72□□□□□ -0.21
RFFL-211ENST00000584541 C17orf77Q96MU5 243 aa13.72□□□□□ -0.21
RFFL-211ENST00000584541 AAMDCQ9H7C9 122 aa13.72□□□□□ -0.21
RFFL-211ENST00000584541 CLEC5AQ9NY25 188 aa13.72□□□□□ -0.21
RFFL-211ENST00000584541 PPT1P50897 306 aa13.71□□□□□ -0.21
RFFL-211ENST00000584541 RAB14P61106 215 aa13.71□□□□□ -0.21
RFFL-211ENST00000584541 EGFEM1PQ0D2K5 195 aa13.71□□□□□ -0.21
RFFL-211ENST00000584541 BEAN1Q3B7T3 259 aa13.71□□□□□ -0.21
RFFL-211ENST00000584541 SUN5Q8TC36 379 aa13.71□□□□□ -0.21
RFFL-211ENST00000584541 TMPRSS5Q9H3S3 457 aa13.71□□□□□ -0.21
RFFL-211ENST00000584541 ZNF331Q9NQX6 463 aaPredicted RBP13.71□□□□□ -0.21
RFFL-211ENST00000584541 SOCS3O14543 225 aa13.7□□□□□ -0.22
RFFL-211ENST00000584541 ZNF688P0C7X2 276 aa13.7□□□□□ -0.22
RFFL-211ENST00000584541 LYPD1Q8N2G4 141 aa13.7□□□□□ -0.22
RFFL-211ENST00000584541 SLC17A3O00476 420 aa13.69□□□□□ -0.22
RFFL-211ENST00000584541 NDUFB4O95168 129 aa13.69□□□□□ -0.22
RFFL-211ENST00000584541 CD81P60033 236 aa13.69□□□□□ -0.22
RFFL-211ENST00000584541 RANP62826 216 aaKnown RBP13.69□□□□□ -0.22
RFFL-211ENST00000584541 IFITM2Q01629 132 aa13.69□□□□□ -0.22
RFFL-211ENST00000584541 LINC00052Q96N35 136 aa13.69□□□□□ -0.22
RFFL-211ENST00000584541 SORL1Q92673 2214 aa13.68□□□□□ -0.22
RFFL-211ENST00000584541 PSMG4Q5JS54 123 aa13.68□□□□□ -0.22
RFFL-211ENST00000584541 FAM24BQ8N5W8 94 aa13.68□□□□□ -0.22
RFFL-211ENST00000584541 Q9H3A6 140 aa13.68□□□□□ -0.22
RFFL-211ENST00000584541 PRELID1Q9Y255 219 aa13.68□□□□□ -0.22
RFFL-211ENST00000584541 NBEAL1Q6ZS30 2694 aa13.67□□□□□ -0.22
RFFL-211ENST00000584541 NOTCH3Q9UM47 2321 aa13.67□□□□□ -0.22
RFFL-211ENST00000584541 TRAV8-2A0A0B4J237 113 aa13.67□□□□□ -0.22
RFFL-211ENST00000584541 A0A1W2PRE2 83 aa13.67□□□□□ -0.22
RFFL-211ENST00000584541 OR11H12B2RN74 326 aa13.67□□□□□ -0.22
RFFL-211ENST00000584541 IFNA1P01562 189 aa13.67□□□□□ -0.22
RFFL-211ENST00000584541 UBE2G2P60604 165 aa13.67□□□□□ -0.22
RFFL-211ENST00000584541 ICAM4Q14773 271 aa13.67□□□□□ -0.22
RFFL-211ENST00000584541 PSG3Q16557 428 aa13.67□□□□□ -0.22
RFFL-211ENST00000584541 IGFL4Q6B9Z1 124 aa13.67□□□□□ -0.22
RFFL-211ENST00000584541 EXOC3-AS1Q8N2X6 119 aa13.67□□□□□ -0.22
RFFL-211ENST00000584541 RNF182Q8N6D2 247 aa13.67□□□□□ -0.22
RFFL-211ENST00000584541 FAM110AQ9BQ89 295 aa13.67□□□□□ -0.22
RFFL-211ENST00000584541 NKX6-2Q9C056 277 aaPredicted RBP13.67□□□□□ -0.22
RFFL-211ENST00000584541 MAP6D1Q9H9H5 199 aa13.67□□□□□ -0.22
RFFL-211ENST00000584541 MANBALQ9NQG1 85 aa13.67□□□□□ -0.22
RFFL-211ENST00000584541 OTORQ9NRC9 128 aa13.67□□□□□ -0.22
RFFL-211ENST00000584541 ARL2-SNX15V9GYD0 113 aa13.67□□□□□ -0.22
RFFL-211ENST00000584541 CD7P09564 240 aa13.66□□□□□ -0.22
RFFL-211ENST00000584541 DEFB131AP59861 70 aa13.66□□□□□ -0.22
RFFL-211ENST00000584541 KRTAP10-11P60412 298 aa13.66□□□□□ -0.22
RFFL-211ENST00000584541 ZNF738Q8NE65 137 aa13.66□□□□□ -0.22
RFFL-211ENST00000584541 GNG13Q9P2W3 67 aa13.66□□□□□ -0.22
RFFL-211ENST00000584541 PGPA6NDG6 321 aa13.65□□□□□ -0.22
RFFL-211ENST00000584541 NMBP08949 121 aa13.65□□□□□ -0.22
RFFL-211ENST00000584541 HLA-DMBP28068 263 aa13.65□□□□□ -0.22
RFFL-211ENST00000584541 CSN1S1P47710 185 aa13.65□□□□□ -0.22
RFFL-211ENST00000584541 CCL20P78556 96 aa13.65□□□□□ -0.22
RFFL-211ENST00000584541 CST9LP1Q5W188 147 aa13.65□□□□□ -0.22
RFFL-211ENST00000584541 LYPD6BQ8NI32 183 aa13.65□□□□□ -0.22
RFFL-211ENST00000584541 CMTM2Q8TAZ6 248 aa13.65□□□□□ -0.22
RFFL-211ENST00000584541 PCNPQ8WW12 178 aaKnown RBP13.65□□□□□ -0.22
RFFL-211ENST00000584541 MRPL53Q96EL3 112 aaKnown RBP13.65□□□□□ -0.22
RFFL-211ENST00000584541 PRR25Q96S07 402 aa13.65□□□□□ -0.22
RFFL-211ENST00000584541 FAM74A7A6NL05 159 aa13.64□□□□□ -0.23
RFFL-211ENST00000584541 PAGE4O60829 102 aa13.64□□□□□ -0.23
RFFL-211ENST00000584541 ODF3L2Q3SX64 289 aa13.64□□□□□ -0.23
RFFL-211ENST00000584541 KPRPQ5T749 579 aaPredicted RBP13.64□□□□□ -0.23
RFFL-211ENST00000584541 RXFP4Q8TDU9 374 aa13.64□□□□□ -0.23
RFFL-211ENST00000584541 C20orf173Q96LM9 149 aa13.64□□□□□ -0.23
RFFL-211ENST00000584541 CMYA5Q8N3K9 4069 aa13.63□□□□□ -0.23
RFFL-211ENST00000584541 SLC25A5P05141 298 aaKnown RBP13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms