RNA–Protein interactions for RNA: ENST00000584472.5

CSNK1D-223, Transcript of casein kinase 1 delta, humanhuman

TSL 4

Gene CSNK1D, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-223ENST00000584472 GBGT1Q8N5D6 347 aa11.93□□□□□ -0.5
CSNK1D-223ENST00000584472 FAM213BQ8TBF2 198 aa11.93□□□□□ -0.5
CSNK1D-223ENST00000584472 OR51M1Q9H341 326 aa11.93□□□□□ -0.5
CSNK1D-223ENST00000584472 NRN1Q9NPD7 142 aa11.93□□□□□ -0.5
CSNK1D-223ENST00000584472 A0A087X0K7 114 aa11.92□□□□□ -0.5
CSNK1D-223ENST00000584472 OR7C2O60412 319 aa11.92□□□□□ -0.5
CSNK1D-223ENST00000584472 IGHV4-30-4P0DP06 118 aa11.92□□□□□ -0.5
CSNK1D-223ENST00000584472 ATF4P18848 351 aaPredicted RBP11.92□□□□□ -0.5
CSNK1D-223ENST00000584472 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.92□□□□□ -0.5
CSNK1D-223ENST00000584472 PQLC2Q6ZP29 291 aa11.92□□□□□ -0.5
CSNK1D-223ENST00000584472 DCANP1Q8TF63 244 aa11.92□□□□□ -0.5
CSNK1D-223ENST00000584472 FXYD5Q96DB9 178 aa11.92□□□□□ -0.5
CSNK1D-223ENST00000584472 PAXXQ9BUH6 204 aa11.92□□□□□ -0.5
CSNK1D-223ENST00000584472 HRH4Q9H3N8 390 aa11.92□□□□□ -0.5
CSNK1D-223ENST00000584472 TRAV2A0A0B4J234 112 aa11.91□□□□□ -0.5
CSNK1D-223ENST00000584472 H3BQ15 152 aa11.91□□□□□ -0.5
CSNK1D-223ENST00000584472 K7EQG2 157 aa11.91□□□□□ -0.5
CSNK1D-223ENST00000584472 DNASE2O00115 360 aaPredicted RBP11.91□□□□□ -0.5
CSNK1D-223ENST00000584472 SNRPCP09234 159 aaKnown RBP11.91□□□□□ -0.5
CSNK1D-223ENST00000584472 FRMD6-AS1P0C7T7 363 aa11.91□□□□□ -0.5
CSNK1D-223ENST00000584472 ARL14EPLP0DKL9 152 aa11.91□□□□□ -0.5
CSNK1D-223ENST00000584472 HIST1H1EP10412 219 aaKnown RBP11.91□□□□□ -0.5
CSNK1D-223ENST00000584472 TFPI2P48307 235 aa11.91□□□□□ -0.5
CSNK1D-223ENST00000584472 TEX261Q6UWH6 196 aa11.91□□□□□ -0.5
CSNK1D-223ENST00000584472 WFDC3Q8IUB2 231 aa11.91□□□□□ -0.5
CSNK1D-223ENST00000584472 RNF141Q8WVD5 230 aa11.91□□□□□ -0.5
CSNK1D-223ENST00000584472 C19orf73Q9NVV2 129 aa11.91□□□□□ -0.5
CSNK1D-223ENST00000584472 ZNF586Q9NXT0 402 aa11.91□□□□□ -0.5
CSNK1D-223ENST00000584472 MAP1LC3B2A6NCE7 125 aa11.9□□□□□ -0.5
CSNK1D-223ENST00000584472 OR4C46A6NHA9 309 aa11.9□□□□□ -0.5
CSNK1D-223ENST00000584472 SOCS3O14543 225 aa11.9□□□□□ -0.5
CSNK1D-223ENST00000584472 CXorf1O96002 111 aa11.9□□□□□ -0.5
CSNK1D-223ENST00000584472 CD7P09564 240 aa11.9□□□□□ -0.5
CSNK1D-223ENST00000584472 OR10J4P0C629 311 aa11.9□□□□□ -0.5
CSNK1D-223ENST00000584472 MEOX2P50222 304 aa11.9□□□□□ -0.5
CSNK1D-223ENST00000584472 GUK1Q16774 197 aa11.9□□□□□ -0.5
CSNK1D-223ENST00000584472 LCN15Q6UWW0 184 aa11.9□□□□□ -0.5
CSNK1D-223ENST00000584472 MBD3L1Q8WWY6 194 aa11.9□□□□□ -0.5
CSNK1D-223ENST00000584472 MAP1LC3BQ9GZQ8 125 aa11.9□□□□□ -0.5
CSNK1D-223ENST00000584472 KMT2CQ8NEZ4 4911 aaKnown RBP11.9□□□□□ -0.5
CSNK1D-223ENST00000584472 H3BTX0 84 aa11.89□□□□□ -0.51
CSNK1D-223ENST00000584472 H2AFB1P0C5Y9 115 aa11.89□□□□□ -0.51
CSNK1D-223ENST00000584472 NBEAP1P0C6P0 100 aa11.89□□□□□ -0.51
CSNK1D-223ENST00000584472 UBE2L3P68036 154 aaKnown RBP11.89□□□□□ -0.51
CSNK1D-223ENST00000584472 ZNF680Q8NEM1 530 aa11.89□□□□□ -0.51
CSNK1D-223ENST00000584472 SAT2Q96F10 170 aaPredicted RBP11.89□□□□□ -0.51
CSNK1D-223ENST00000584472 U3KQK5 164 aa11.89□□□□□ -0.51
CSNK1D-223ENST00000584472 TRBV19A0A075B6N1 114 aa11.88□□□□□ -0.51
CSNK1D-223ENST00000584472 ZNF705EA8MWA4 302 aaPredicted RBP11.88□□□□□ -0.51
CSNK1D-223ENST00000584472 OR11H12B2RN74 326 aa11.88□□□□□ -0.51
CSNK1D-223ENST00000584472 GCHFRP30047 84 aa11.88□□□□□ -0.51
CSNK1D-223ENST00000584472 FGF8P55075 233 aaPredicted RBP11.88□□□□□ -0.51
CSNK1D-223ENST00000584472 SAMD13Q5VXD3 122 aa11.88□□□□□ -0.51
CSNK1D-223ENST00000584472 FAM24BQ8N5W8 94 aa11.88□□□□□ -0.51
CSNK1D-223ENST00000584472 SUN5Q8TC36 379 aa11.88□□□□□ -0.51
CSNK1D-223ENST00000584472 SFT2D1Q8WV19 159 aa11.88□□□□□ -0.51
CSNK1D-223ENST00000584472 BLNKQ8WV28 456 aa11.88□□□□□ -0.51
CSNK1D-223ENST00000584472 C16orf92Q96LL3 132 aa11.88□□□□□ -0.51
CSNK1D-223ENST00000584472 FAM110AQ9BQ89 295 aa11.88□□□□□ -0.51
CSNK1D-223ENST00000584472 TUBA4BQ9H853 241 aa11.88□□□□□ -0.51
CSNK1D-223ENST00000584472 TRAV8-2A0A0B4J237 113 aa11.87□□□□□ -0.51
CSNK1D-223ENST00000584472 SLC17A3O00476 420 aa11.87□□□□□ -0.51
CSNK1D-223ENST00000584472 ISLRO14498 428 aa11.87□□□□□ -0.51
CSNK1D-223ENST00000584472 ZNF253O75346 499 aa11.87□□□□□ -0.51
CSNK1D-223ENST00000584472 NDUFB4O95168 129 aa11.87□□□□□ -0.51
CSNK1D-223ENST00000584472 IFNA7P01567 189 aa11.87□□□□□ -0.51
CSNK1D-223ENST00000584472 PDE6HQ13956 83 aa11.87□□□□□ -0.51
CSNK1D-223ENST00000584472 SLC50A1Q9BRV3 221 aa11.87□□□□□ -0.51
CSNK1D-223ENST00000584472 ZNF331Q9NQX6 463 aaPredicted RBP11.87□□□□□ -0.51
CSNK1D-223ENST00000584472 TMEM167BQ9NRX6 74 aa11.87□□□□□ -0.51
CSNK1D-223ENST00000584472 PSMB3P49720 205 aa11.86□□□□□ -0.51
CSNK1D-223ENST00000584472 IQCF2Q8IXL9 164 aa11.86□□□□□ -0.51
CSNK1D-223ENST00000584472 LRRC20Q8TCA0 184 aa11.86□□□□□ -0.51
CSNK1D-223ENST00000584472 TMPRSS5Q9H3S3 457 aa11.86□□□□□ -0.51
CSNK1D-223ENST00000584472 UBQLN2Q9UHD9 624 aa11.86□□□□□ -0.51
CSNK1D-223ENST00000584472 TRAV1-1A0A0B4J248 108 aa11.85□□□□□ -0.51
CSNK1D-223ENST00000584472 ZNF688P0C7X2 276 aa11.85□□□□□ -0.51
CSNK1D-223ENST00000584472 ID1P41134 155 aa11.85□□□□□ -0.51
CSNK1D-223ENST00000584472 CMC4P56277 68 aaPredicted RBP11.85□□□□□ -0.51
CSNK1D-223ENST00000584472 ODF3L2Q3SX64 289 aa11.85□□□□□ -0.51
CSNK1D-223ENST00000584472 IGFL4Q6B9Z1 124 aa11.85□□□□□ -0.51
CSNK1D-223ENST00000584472 SBSPONQ8IVN8 264 aa11.85□□□□□ -0.51
CSNK1D-223ENST00000584472 DEFB125Q8N687 156 aa11.85□□□□□ -0.51
CSNK1D-223ENST00000584472 WFDC10AQ9H1F0 79 aa11.85□□□□□ -0.51
CSNK1D-223ENST00000584472 SRD5A3Q9H8P0 318 aa11.85□□□□□ -0.51
CSNK1D-223ENST00000584472 MAP6D1Q9H9H5 199 aa11.85□□□□□ -0.51
CSNK1D-223ENST00000584472 A0A1B0GV50 99 aa11.84□□□□□ -0.51
CSNK1D-223ENST00000584472 HBE1P02100 147 aa11.84□□□□□ -0.51
CSNK1D-223ENST00000584472 HLA-DMBP28068 263 aa11.84□□□□□ -0.51
CSNK1D-223ENST00000584472 SNRPD3P62318 126 aaKnown RBP11.84□□□□□ -0.51
CSNK1D-223ENST00000584472 BLOC1S1P78537 153 aa11.84□□□□□ -0.51
CSNK1D-223ENST00000584472 PSG9Q00887 426 aa11.84□□□□□ -0.51
CSNK1D-223ENST00000584472 IFITM2Q01629 132 aa11.84□□□□□ -0.51
CSNK1D-223ENST00000584472 LINC00322Q6ZN03 302 aaPredicted RBP11.84□□□□□ -0.51
CSNK1D-223ENST00000584472 C20orf173Q96LM9 149 aa11.84□□□□□ -0.51
CSNK1D-223ENST00000584472 ASCL2Q99929 193 aa11.84□□□□□ -0.51
CSNK1D-223ENST00000584472 TEX46H3BTG2 121 aa11.83□□□□□ -0.52
CSNK1D-223ENST00000584472 DEFB131AP59861 70 aa11.83□□□□□ -0.52
CSNK1D-223ENST00000584472 RANP62826 216 aaKnown RBP11.83□□□□□ -0.52
CSNK1D-223ENST00000584472 PSMG4Q5JS54 123 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 125.2 ms