RNA–Protein interactions for RNA: ENST00000584112.1

CCDC47-206, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2

Gene CCDC47, Length 588 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-206ENST00000584112 PXDC1Q5TGL8 231 aa7.95□□□□□ -1.14
CCDC47-206ENST00000584112 TEPPQ6URK8 271 aa7.95□□□□□ -1.14
CCDC47-206ENST00000584112 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.95□□□□□ -1.14
CCDC47-206ENST00000584112 ZNF767PQ75MW2 155 aa7.95□□□□□ -1.14
CCDC47-206ENST00000584112 ZBTB8BQ8NAP8 495 aaPredicted RBP7.95□□□□□ -1.14
CCDC47-206ENST00000584112 C20orf173Q96LM9 149 aa7.95□□□□□ -1.14
CCDC47-206ENST00000584112 NDUFAF3Q9BU61 184 aa7.95□□□□□ -1.14
CCDC47-206ENST00000584112 GGACTQ9BVM4 153 aa7.95□□□□□ -1.14
CCDC47-206ENST00000584112 C20orf85Q9H1P6 137 aa7.95□□□□□ -1.14
CCDC47-206ENST00000584112 LYRM1O43325 122 aa7.94□□□□□ -1.14
CCDC47-206ENST00000584112 CCNKO75909 580 aa7.94□□□□□ -1.14
CCDC47-206ENST00000584112 P0DMU3 169 aa7.94□□□□□ -1.14
CCDC47-206ENST00000584112 FAM231AP0DMU4 169 aa7.94□□□□□ -1.14
CCDC47-206ENST00000584112 FAM231CP0DMU5 169 aa7.94□□□□□ -1.14
CCDC47-206ENST00000584112 RRN3P1Q2M238 152 aa7.94□□□□□ -1.14
CCDC47-206ENST00000584112 ZNF546Q86UE3 836 aa7.94□□□□□ -1.14
CCDC47-206ENST00000584112 ZNF738Q8NE65 137 aa7.94□□□□□ -1.14
CCDC47-206ENST00000584112 FAM210BQ96KR6 192 aa7.94□□□□□ -1.14
CCDC47-206ENST00000584112 IGF2BP2-AS1Q96M15 143 aa7.94□□□□□ -1.14
CCDC47-206ENST00000584112 C17orf77Q96MU5 243 aa7.94□□□□□ -1.14
CCDC47-206ENST00000584112 NIPSNAP3BQ9BS92 247 aa7.94□□□□□ -1.14
CCDC47-206ENST00000584112 TMEM208Q9BTX3 173 aa7.94□□□□□ -1.14
CCDC47-206ENST00000584112 ARL6Q9H0F7 186 aa7.94□□□□□ -1.14
CCDC47-206ENST00000584112 RCL1Q9Y2P8 373 aaKnown RBP7.94□□□□□ -1.14
CCDC47-206ENST00000584112 A0A087X0K7 114 aa7.93□□□□□ -1.14
CCDC47-206ENST00000584112 LOC102723971A0A1B0GUV8 181 aa7.93□□□□□ -1.14
CCDC47-206ENST00000584112 L7N2F9 121 aa7.93□□□□□ -1.14
CCDC47-206ENST00000584112 GOSR2O14653 212 aa7.93□□□□□ -1.14
CCDC47-206ENST00000584112 INSP01308 110 aa7.93□□□□□ -1.14
CCDC47-206ENST00000584112 MBPP02686 304 aaPredicted RBP7.93□□□□□ -1.14
CCDC47-206ENST00000584112 TCRBP04435 133 aa7.93□□□□□ -1.14
CCDC47-206ENST00000584112 CNN1P51911 297 aaKnown RBP7.93□□□□□ -1.14
CCDC47-206ENST00000584112 B2MP61769 119 aa7.93□□□□□ -1.14
CCDC47-206ENST00000584112 VAMP2P63027 116 aa7.93□□□□□ -1.14
CCDC47-206ENST00000584112 FAM222AQ5U5X8 452 aa7.93□□□□□ -1.14
CCDC47-206ENST00000584112 AMTNQ6UX39 209 aa7.93□□□□□ -1.14
CCDC47-206ENST00000584112 GSG1LQ6UXU4 331 aa7.93□□□□□ -1.14
CCDC47-206ENST00000584112 C1orf158Q8N1D5 194 aa7.93□□□□□ -1.14
CCDC47-206ENST00000584112 LRRC20Q8TCA0 184 aa7.93□□□□□ -1.14
CCDC47-206ENST00000584112 UHRF2Q96PU4 802 aa7.93□□□□□ -1.14
CCDC47-206ENST00000584112 ARV1Q9H2C2 271 aa7.93□□□□□ -1.14
CCDC47-206ENST00000584112 DKK2Q9UBU2 259 aa7.93□□□□□ -1.14
CCDC47-206ENST00000584112 TRAV8-2A0A0B4J237 113 aa7.92□□□□□ -1.14
CCDC47-206ENST00000584112 C7orf66A4D0T2 115 aa7.92□□□□□ -1.14
CCDC47-206ENST00000584112 PLA2G10O15496 165 aa7.92□□□□□ -1.14
CCDC47-206ENST00000584112 PRB4P10163 310 aaPredicted RBP7.92□□□□□ -1.14
CCDC47-206ENST00000584112 SLC38A11Q08AI6 406 aa7.92□□□□□ -1.14
CCDC47-206ENST00000584112 OXA1LQ15070 435 aa7.92□□□□□ -1.14
CCDC47-206ENST00000584112 RNF182Q8N6D2 247 aa7.92□□□□□ -1.14
CCDC47-206ENST00000584112 OR11H7Q8NGC8 314 aa7.92□□□□□ -1.14
CCDC47-206ENST00000584112 CCDC32Q9BV29 185 aa7.92□□□□□ -1.14
CCDC47-206ENST00000584112 YTHDF2Q9Y5A9 579 aaKnown RBP7.92□□□□□ -1.14
CCDC47-206ENST00000584112 TRAV6A0A075B6T7 132 aa7.91□□□□□ -1.14
CCDC47-206ENST00000584112 C5orf51A6NDU8 294 aa7.91□□□□□ -1.14
CCDC47-206ENST00000584112 FAM25EA8MYX2 175 aa7.91□□□□□ -1.14
CCDC47-206ENST00000584112 CCSO14618 274 aa7.91□□□□□ -1.14
CCDC47-206ENST00000584112 AGPAT2O15120 278 aa7.91□□□□□ -1.14
CCDC47-206ENST00000584112 CXCL2P19875 107 aa7.91□□□□□ -1.14
CCDC47-206ENST00000584112 RAB31Q13636 194 aa7.91□□□□□ -1.14
CCDC47-206ENST00000584112 PSG3Q16557 428 aa7.91□□□□□ -1.14
CCDC47-206ENST00000584112 SPINK13Q1W4C9 94 aa7.91□□□□□ -1.14
CCDC47-206ENST00000584112 Q5VSD8 79 aa7.91□□□□□ -1.14
CCDC47-206ENST00000584112 IGFL4Q6B9Z1 124 aa7.91□□□□□ -1.14
CCDC47-206ENST00000584112 LCN15Q6UWW0 184 aa7.91□□□□□ -1.14
CCDC47-206ENST00000584112 ZNF431Q8TF32 576 aaPredicted RBP7.91□□□□□ -1.14
CCDC47-206ENST00000584112 NUDT15Q9NV35 164 aa7.91□□□□□ -1.14
CCDC47-206ENST00000584112 PPP1R14DQ9NXH3 145 aa7.91□□□□□ -1.14
CCDC47-206ENST00000584112 LSM5Q9Y4Y9 91 aaKnown RBP7.91□□□□□ -1.14
CCDC47-206ENST00000584112 LRP2P98164 4655 aa7.9□□□□□ -1.14
CCDC47-206ENST00000584112 BOLA2-SMG1P6H3BVE0 249 aa7.9□□□□□ -1.14
CCDC47-206ENST00000584112 M0R2Z0 102 aa7.9□□□□□ -1.14
CCDC47-206ENST00000584112 COX7A2P2O60397 106 aa7.9□□□□□ -1.14
CCDC47-206ENST00000584112 CXCL3P19876 107 aa7.9□□□□□ -1.14
CCDC47-206ENST00000584112 PVALBP20472 110 aaPredicted RBP7.9□□□□□ -1.14
CCDC47-206ENST00000584112 BCAP31P51572 246 aa7.9□□□□□ -1.14
CCDC47-206ENST00000584112 CAV2P51636 162 aa7.9□□□□□ -1.14
CCDC47-206ENST00000584112 DAD1P61803 113 aa7.9□□□□□ -1.14
CCDC47-206ENST00000584112 RHOBP62745 196 aa7.9□□□□□ -1.14
CCDC47-206ENST00000584112 HIST1H1AQ02539 215 aaPredicted RBP7.9□□□□□ -1.14
CCDC47-206ENST00000584112 ARL16Q0P5N6 197 aa7.9□□□□□ -1.14
CCDC47-206ENST00000584112 PATE2Q6UY27 113 aa7.9□□□□□ -1.14
CCDC47-206ENST00000584112 LINC00305Q7Z4B0 112 aa7.9□□□□□ -1.14
CCDC47-206ENST00000584112 BPIFA4PQ86YQ2 179 aa7.9□□□□□ -1.14
CCDC47-206ENST00000584112 TMEM256Q8N2U0 113 aa7.9□□□□□ -1.14
CCDC47-206ENST00000584112 C12orf45Q8N5I9 185 aaPredicted RBP7.9□□□□□ -1.14
CCDC47-206ENST00000584112 POM121L12Q8N7R1 296 aa7.9□□□□□ -1.14
CCDC47-206ENST00000584112 OR8A1Q8NGG7 326 aa7.9□□□□□ -1.14
CCDC47-206ENST00000584112 SLC50A1Q9BRV3 221 aa7.9□□□□□ -1.14
CCDC47-206ENST00000584112 LYRM9A8MSI8 78 aa7.89□□□□□ -1.15
CCDC47-206ENST00000584112 CRXO43186 299 aaPredicted RBP7.89□□□□□ -1.15
CCDC47-206ENST00000584112 H2AFB2P0C5Z0 115 aa7.89□□□□□ -1.15
CCDC47-206ENST00000584112 TSPOP30536 169 aa7.89□□□□□ -1.15
CCDC47-206ENST00000584112 CAMLGP49069 296 aa7.89□□□□□ -1.15
CCDC47-206ENST00000584112 C10orf113Q5VZT2 155 aa7.89□□□□□ -1.15
CCDC47-206ENST00000584112 Q6ZRG5 221 aa7.89□□□□□ -1.15
CCDC47-206ENST00000584112 LINC00299Q6ZSB3 139 aa7.89□□□□□ -1.15
CCDC47-206ENST00000584112 UBE2DNLQ8IWF7 75 aa7.89□□□□□ -1.15
CCDC47-206ENST00000584112 C2orf50Q96LR7 162 aa7.89□□□□□ -1.15
CCDC47-206ENST00000584112 MGST2Q99735 147 aa7.89□□□□□ -1.15
CCDC47-206ENST00000584112 SEC22CQ9BRL7 303 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms