RNA–Protein interactions for RNA: ENST00000584042.1

CDK5RAP3-230, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 638 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-230ENST00000584042 BLNKQ8WV28 456 aa12.62□□□□□ -0.39
CDK5RAP3-230ENST00000584042 C17orf77Q96MU5 243 aa12.62□□□□□ -0.39
CDK5RAP3-230ENST00000584042 MDFIQ99750 246 aa12.62□□□□□ -0.39
CDK5RAP3-230ENST00000584042 TXNDC17Q9BRA2 123 aa12.62□□□□□ -0.39
CDK5RAP3-230ENST00000584042 TRAV2A0A0B4J234 112 aa12.61□□□□□ -0.39
CDK5RAP3-230ENST00000584042 TRAV25A0A0B4J276 109 aa12.61□□□□□ -0.39
CDK5RAP3-230ENST00000584042 LOC102723971A0A1B0GUV8 181 aa12.61□□□□□ -0.39
CDK5RAP3-230ENST00000584042 FAM74A7A6NL05 159 aa12.61□□□□□ -0.39
CDK5RAP3-230ENST00000584042 SLC17A3O00476 420 aa12.61□□□□□ -0.39
CDK5RAP3-230ENST00000584042 SAP30O75446 220 aa12.61□□□□□ -0.39
CDK5RAP3-230ENST00000584042 UBE2G2P60604 165 aa12.61□□□□□ -0.39
CDK5RAP3-230ENST00000584042 DEFB114Q30KQ6 69 aa12.61□□□□□ -0.39
CDK5RAP3-230ENST00000584042 KRTAP21-3Q3LHN1 58 aa12.61□□□□□ -0.39
CDK5RAP3-230ENST00000584042 ZNF506Q5JVG8 444 aa12.61□□□□□ -0.39
CDK5RAP3-230ENST00000584042 LYPD1Q8N2G4 141 aa12.61□□□□□ -0.39
CDK5RAP3-230ENST00000584042 MCRIP2Q9BUT9 160 aaKnown RBP12.61□□□□□ -0.39
CDK5RAP3-230ENST00000584042 NKX6-2Q9C056 277 aaPredicted RBP12.61□□□□□ -0.39
CDK5RAP3-230ENST00000584042 YTHDF2Q9Y5A9 579 aaKnown RBP12.61□□□□□ -0.39
CDK5RAP3-230ENST00000584042 RAB19A4D1S5 217 aa12.6□□□□□ -0.39
CDK5RAP3-230ENST00000584042 H3BTX0 84 aa12.6□□□□□ -0.39
CDK5RAP3-230ENST00000584042 SOCS3O14543 225 aa12.6□□□□□ -0.39
CDK5RAP3-230ENST00000584042 TSPAN4O14817 238 aa12.6□□□□□ -0.39
CDK5RAP3-230ENST00000584042 NDUFS6O75380 124 aaKnown RBP12.6□□□□□ -0.39
CDK5RAP3-230ENST00000584042 NDUFB4O95168 129 aa12.6□□□□□ -0.39
CDK5RAP3-230ENST00000584042 IGLV1-51P01701 117 aa12.6□□□□□ -0.39
CDK5RAP3-230ENST00000584042 CD33P20138 364 aa12.6□□□□□ -0.39
CDK5RAP3-230ENST00000584042 INSL3P51460 131 aa12.6□□□□□ -0.39
CDK5RAP3-230ENST00000584042 RPL11P62913 178 aaKnown RBP12.6□□□□□ -0.39
CDK5RAP3-230ENST00000584042 PSG9Q00887 426 aa12.6□□□□□ -0.39
CDK5RAP3-230ENST00000584042 TOR2AQ5JU69 321 aa12.6□□□□□ -0.39
CDK5RAP3-230ENST00000584042 TMEM61Q8N0U2 210 aa12.6□□□□□ -0.39
CDK5RAP3-230ENST00000584042 WFDC9Q8NEX5 89 aa12.6□□□□□ -0.39
CDK5RAP3-230ENST00000584042 ZNF331Q9NQX6 463 aaPredicted RBP12.6□□□□□ -0.39
CDK5RAP3-230ENST00000584042 RBFOX3A6NFN3 312 aa12.59□□□□□ -0.39
CDK5RAP3-230ENST00000584042 GGTLC3B5MD39 225 aa12.59□□□□□ -0.39
CDK5RAP3-230ENST00000584042 PAGE4O60829 102 aa12.59□□□□□ -0.39
CDK5RAP3-230ENST00000584042 SNRPCP09234 159 aaKnown RBP12.59□□□□□ -0.39
CDK5RAP3-230ENST00000584042 MEF2BQ02080 365 aaPredicted RBP12.59□□□□□ -0.39
CDK5RAP3-230ENST00000584042 HAGHQ16775 308 aa12.59□□□□□ -0.39
CDK5RAP3-230ENST00000584042 C9orf66Q5T8R8 295 aa12.59□□□□□ -0.39
CDK5RAP3-230ENST00000584042 COMMD7Q86VX2 200 aa12.59□□□□□ -0.39
CDK5RAP3-230ENST00000584042 DCANP1Q8TF63 244 aa12.59□□□□□ -0.39
CDK5RAP3-230ENST00000584042 TCEAL7Q9BRU2 100 aa12.59□□□□□ -0.39
CDK5RAP3-230ENST00000584042 Q9H3A6 140 aa12.59□□□□□ -0.39
CDK5RAP3-230ENST00000584042 OTORQ9NRC9 128 aa12.59□□□□□ -0.39
CDK5RAP3-230ENST00000584042 CLEC5AQ9NY25 188 aa12.59□□□□□ -0.39
CDK5RAP3-230ENST00000584042 VAX2Q9UIW0 290 aa12.59□□□□□ -0.39
CDK5RAP3-230ENST00000584042 ISLRO14498 428 aa12.58□□□□□ -0.4
CDK5RAP3-230ENST00000584042 ICAM4Q14773 271 aa12.58□□□□□ -0.4
CDK5RAP3-230ENST00000584042 CD300EQ496F6 205 aaPredicted RBP12.58□□□□□ -0.4
CDK5RAP3-230ENST00000584042 RBPMS2Q6ZRY4 209 aaKnown RBP12.58□□□□□ -0.4
CDK5RAP3-230ENST00000584042 SPAG8Q99932 426 aaPredicted RBP12.58□□□□□ -0.4
CDK5RAP3-230ENST00000584042 MS4A6AQ9H2W1 248 aa12.58□□□□□ -0.4
CDK5RAP3-230ENST00000584042 SMDT1Q9H4I9 107 aa12.58□□□□□ -0.4
CDK5RAP3-230ENST00000584042 AAMDCQ9H7C9 122 aa12.58□□□□□ -0.4
CDK5RAP3-230ENST00000584042 C11orf94C9JXX5 98 aa12.57□□□□□ -0.4
CDK5RAP3-230ENST00000584042 K7EQG2 157 aa12.57□□□□□ -0.4
CDK5RAP3-230ENST00000584042 ATP5G3P48201 142 aa12.57□□□□□ -0.4
CDK5RAP3-230ENST00000584042 RANP62826 216 aaKnown RBP12.57□□□□□ -0.4
CDK5RAP3-230ENST00000584042 PAFAH1B2P68402 229 aa12.57□□□□□ -0.4
CDK5RAP3-230ENST00000584042 NDUFA5Q16718 116 aa12.57□□□□□ -0.4
CDK5RAP3-230ENST00000584042 CST9LP1Q5W188 147 aa12.57□□□□□ -0.4
CDK5RAP3-230ENST00000584042 LCN12Q6JVE5 192 aa12.57□□□□□ -0.4
CDK5RAP3-230ENST00000584042 SPATA3Q8NHX4 192 aa12.57□□□□□ -0.4
CDK5RAP3-230ENST00000584042 MRPL53Q96EL3 112 aaKnown RBP12.57□□□□□ -0.4
CDK5RAP3-230ENST00000584042 PRELID1Q9Y255 219 aa12.57□□□□□ -0.4
CDK5RAP3-230ENST00000584042 SELENOKQ9Y6D0 94 aa12.57□□□□□ -0.4
CDK5RAP3-230ENST00000584042 VWFP04275 2813 aa12.56□□□□□ -0.4
CDK5RAP3-230ENST00000584042 IGKV3-7A0A075B6H7 116 aa12.56□□□□□ -0.4
CDK5RAP3-230ENST00000584042 TRAV8-2A0A0B4J237 113 aa12.56□□□□□ -0.4
CDK5RAP3-230ENST00000584042 WIPF1O43516 503 aa12.56□□□□□ -0.4
CDK5RAP3-230ENST00000584042 UQCC3Q6UW78 93 aa12.56□□□□□ -0.4
CDK5RAP3-230ENST00000584042 CCDC28AQ8IWP9 274 aa12.56□□□□□ -0.4
CDK5RAP3-230ENST00000584042 EIF4E3Q8N5X7 224 aaKnown RBP12.56□□□□□ -0.4
CDK5RAP3-230ENST00000584042 ARL6IP6Q8N6S5 226 aa12.56□□□□□ -0.4
CDK5RAP3-230ENST00000584042 C5orf17Q8NAS9 161 aa12.56□□□□□ -0.4
CDK5RAP3-230ENST00000584042 C16orf92Q96LL3 132 aa12.56□□□□□ -0.4
CDK5RAP3-230ENST00000584042 RARRES2Q99969 163 aa12.56□□□□□ -0.4
CDK5RAP3-230ENST00000584042 GPR61Q9BZJ8 451 aa12.56□□□□□ -0.4
CDK5RAP3-230ENST00000584042 EIF5A2Q9GZV4 153 aaKnown RBP12.56□□□□□ -0.4
CDK5RAP3-230ENST00000584042 OR4C46A6NHA9 309 aa12.55□□□□□ -0.4
CDK5RAP3-230ENST00000584042 DNASE2O00115 360 aaPredicted RBP12.55□□□□□ -0.4
CDK5RAP3-230ENST00000584042 PDE6DO43924 150 aa12.55□□□□□ -0.4
CDK5RAP3-230ENST00000584042 ID1P41134 155 aa12.55□□□□□ -0.4
CDK5RAP3-230ENST00000584042 CD81P60033 236 aa12.55□□□□□ -0.4
CDK5RAP3-230ENST00000584042 PEA15Q15121 130 aa12.55□□□□□ -0.4
CDK5RAP3-230ENST00000584042 EXOC3-AS1Q8N2X6 119 aa12.55□□□□□ -0.4
CDK5RAP3-230ENST00000584042 GBGT1Q8N5D6 347 aa12.55□□□□□ -0.4
CDK5RAP3-230ENST00000584042 RXFP4Q8TDU9 374 aa12.55□□□□□ -0.4
CDK5RAP3-230ENST00000584042 C11orf52Q96A22 123 aa12.55□□□□□ -0.4
CDK5RAP3-230ENST00000584042 F6UZH7 168 aa12.54□□□□□ -0.4
CDK5RAP3-230ENST00000584042 SUMO1P63165 101 aaKnown RBP12.54□□□□□ -0.4
CDK5RAP3-230ENST00000584042 CMTM2Q8TAZ6 248 aa12.54□□□□□ -0.4
CDK5RAP3-230ENST00000584042 PGPA6NDG6 321 aa12.53□□□□□ -0.4
CDK5RAP3-230ENST00000584042 TMEM250H0YL14 139 aa12.53□□□□□ -0.4
CDK5RAP3-230ENST00000584042 SLC25A5P05141 298 aaKnown RBP12.53□□□□□ -0.4
CDK5RAP3-230ENST00000584042 SNRPD3P62318 126 aaKnown RBP12.53□□□□□ -0.4
CDK5RAP3-230ENST00000584042 PRR31Q5SQ13 230 aa12.53□□□□□ -0.4
CDK5RAP3-230ENST00000584042 HIST1H2BAQ96A08 127 aa12.53□□□□□ -0.4
CDK5RAP3-230ENST00000584042 SERTM2A0A1B0GWG4 89 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms