RNA–Protein interactions for RNA: ENST00000583441.1

SMCHD1-209, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 5

Gene SMCHD1, Length 657 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-209ENST00000583441 NEK7Q8TDX7 302 aa0.93□□□□□ -2.26
SMCHD1-209ENST00000583441 TNFSF18Q9UNG2 199 aa0.93□□□□□ -2.26
SMCHD1-209ENST00000583441 TNRC6BQ9UPQ9 1833 aaKnown RBP0.93□□□□□ -2.26
SMCHD1-209ENST00000583441 EXPH5Q8NEV8 1989 aa0.92□□□□□ -2.26
SMCHD1-209ENST00000583441 DLG5Q8TDM6 1919 aa0.92□□□□□ -2.26
SMCHD1-209ENST00000583441 B4DSR2 109 aa0.92□□□□□ -2.26
SMCHD1-209ENST00000583441 H3BQV1 296 aa0.92□□□□□ -2.26
SMCHD1-209ENST00000583441 NCR3O14931 201 aa0.92□□□□□ -2.26
SMCHD1-209ENST00000583441 CST7O76096 145 aa0.92□□□□□ -2.26
SMCHD1-209ENST00000583441 IGLV1-51P01701 117 aa0.92□□□□□ -2.26
SMCHD1-209ENST00000583441 S100A5P33763 92 aa0.92□□□□□ -2.26
SMCHD1-209ENST00000583441 HAGHLQ6PII5 290 aaPredicted RBP0.92□□□□□ -2.26
SMCHD1-209ENST00000583441 HOPXQ9BPY8 73 aaPredicted RBP0.92□□□□□ -2.26
SMCHD1-209ENST00000583441 OR2H1Q9GZK4 316 aa0.92□□□□□ -2.26
SMCHD1-209ENST00000583441 TMEM138Q9NPI0 162 aa0.92□□□□□ -2.26
SMCHD1-209ENST00000583441 CAMSAP2Q08AD1 1489 aa0.92□□□□□ -2.26
SMCHD1-209ENST00000583441 hDV103S1A0JD37 113 aa0.91□□□□□ -2.26
SMCHD1-209ENST00000583441 CSN2P05814 226 aa0.91□□□□□ -2.26
SMCHD1-209ENST00000583441 RPL35P42766 123 aaKnown RBP0.91□□□□□ -2.26
SMCHD1-209ENST00000583441 GNG10P50151 68 aa0.91□□□□□ -2.26
SMCHD1-209ENST00000583441 CRYBA4P53673 196 aa0.91□□□□□ -2.26
SMCHD1-209ENST00000583441 HBBP68871 147 aa0.91□□□□□ -2.26
SMCHD1-209ENST00000583441 FKBP1CQ5VVH2 108 aa0.91□□□□□ -2.26
SMCHD1-209ENST00000583441 PPP1R2P3Q6NXS1 205 aa0.91□□□□□ -2.26
SMCHD1-209ENST00000583441 LRRC18Q8N456 261 aa0.91□□□□□ -2.26
SMCHD1-209ENST00000583441 ISOC1Q96CN7 298 aa0.91□□□□□ -2.26
SMCHD1-209ENST00000583441 MED11Q9P086 117 aa0.91□□□□□ -2.26
SMCHD1-209ENST00000583441 ATPIF1Q9UII2 106 aa0.91□□□□□ -2.26
SMCHD1-209ENST00000583441 HSPB8Q9UJY1 196 aa0.91□□□□□ -2.26
SMCHD1-209ENST00000583441 NUBP2Q9Y5Y2 271 aa0.91□□□□□ -2.26
SMCHD1-209ENST00000583441 RFX7Q2KHR2 1363 aa0.91□□□□□ -2.26
SMCHD1-209ENST00000583441 GLRXP35754 106 aa0.9□□□□□ -2.27
SMCHD1-209ENST00000583441 CIRBPQ14011 172 aaKnown RBP0.9□□□□□ -2.27
SMCHD1-209ENST00000583441 MSMO1Q15800 293 aa0.9□□□□□ -2.27
SMCHD1-209ENST00000583441 LTC4SQ16873 150 aa0.9□□□□□ -2.27
SMCHD1-209ENST00000583441 SPRNQ5BIV9 151 aa0.9□□□□□ -2.27
SMCHD1-209ENST00000583441 Q8TAT8 98 aa0.9□□□□□ -2.27
SMCHD1-209ENST00000583441 MCEEQ96PE7 176 aa0.9□□□□□ -2.27
SMCHD1-209ENST00000583441 GGACTQ9BVM4 153 aa0.9□□□□□ -2.27
SMCHD1-209ENST00000583441 TCEAL2Q9H3H9 227 aaPredicted RBP0.9□□□□□ -2.27
SMCHD1-209ENST00000583441 LAMB4A4D0S4 1761 aa0.9□□□□□ -2.27
SMCHD1-209ENST00000583441 EML6Q6ZMW3 1958 aa0.9□□□□□ -2.27
SMCHD1-209ENST00000583441 ODAMA1E959 279 aa0.89□□□□□ -2.27
SMCHD1-209ENST00000583441 KLF7O75840 302 aaPredicted RBP0.89□□□□□ -2.27
SMCHD1-209ENST00000583441 G0S2P27469 103 aa0.89□□□□□ -2.27
SMCHD1-209ENST00000583441 DCUN1D2Q6PH85 259 aa0.89□□□□□ -2.27
SMCHD1-209ENST00000583441 FAM216BQ8N7L0 139 aa0.89□□□□□ -2.27
SMCHD1-209ENST00000583441 DYDC1Q8WWB3 177 aa0.89□□□□□ -2.27
SMCHD1-209ENST00000583441 PCBD2Q9H0N5 130 aa0.89□□□□□ -2.27
SMCHD1-209ENST00000583441 ASB4Q9Y574 426 aa0.89□□□□□ -2.27
SMCHD1-209ENST00000583441 V9GYQ6 96 aa0.89□□□□□ -2.27
SMCHD1-209ENST00000583441 CD109Q6YHK3 1445 aa0.89□□□□□ -2.27
SMCHD1-209ENST00000583441 CECR2Q9BXF3 1484 aa0.88□□□□□ -2.27
SMCHD1-209ENST00000583441 A0A1W2PPM0 123 aa0.88□□□□□ -2.27
SMCHD1-209ENST00000583441 MAP1LC3B2A6NCE7 125 aa0.88□□□□□ -2.27
SMCHD1-209ENST00000583441 K7ERJ3 54 aa0.88□□□□□ -2.27
SMCHD1-209ENST00000583441 MRPS36P82909 103 aaKnown RBP0.88□□□□□ -2.27
SMCHD1-209ENST00000583441 PRR15Q8IV56 129 aa0.88□□□□□ -2.27
SMCHD1-209ENST00000583441 PSMF1Q92530 271 aa0.88□□□□□ -2.27
SMCHD1-209ENST00000583441 CENPHQ9H3R5 247 aa0.88□□□□□ -2.27
SMCHD1-209ENST00000583441 LAMTOR2Q9Y2Q5 125 aa0.88□□□□□ -2.27
SMCHD1-209ENST00000583441 RNF11Q9Y3C5 154 aa0.88□□□□□ -2.27
SMCHD1-209ENST00000583441 RTL9Q8NET4 1388 aa0.87□□□□□ -2.27
SMCHD1-209ENST00000583441 A0A096LPI6 279 aa0.87□□□□□ -2.27
SMCHD1-209ENST00000583441 KPNA4O00629 521 aaPredicted RBP0.87□□□□□ -2.27
SMCHD1-209ENST00000583441 EIF3IQ13347 325 aaKnown RBP0.87□□□□□ -2.27
SMCHD1-209ENST00000583441 TMEM78Q5T7P6 136 aa0.87□□□□□ -2.27
SMCHD1-209ENST00000583441 TMEM14EPQ6UXP3 125 aa0.87□□□□□ -2.27
SMCHD1-209ENST00000583441 STX12Q86Y82 276 aa0.87□□□□□ -2.27
SMCHD1-209ENST00000583441 SREK1IP1Q8N9Q2 155 aaPredicted RBP0.87□□□□□ -2.27
SMCHD1-209ENST00000583441 BORCS8Q96FH0 119 aa0.87□□□□□ -2.27
SMCHD1-209ENST00000583441 CCDC32Q9BV29 185 aa0.87□□□□□ -2.27
SMCHD1-209ENST00000583441 NAT8BQ9UHF3 227 aa0.87□□□□□ -2.27
SMCHD1-209ENST00000583441 NISCHQ9Y2I1 1504 aa0.87□□□□□ -2.27
SMCHD1-209ENST00000583441 CEP192Q8TEP8 1941 aa0.87□□□□□ -2.27
SMCHD1-209ENST00000583441 SYNMO15061 1565 aa0.87□□□□□ -2.27
SMCHD1-209ENST00000583441 SCN8AQ9UQD0 1980 aa0.87□□□□□ -2.27
SMCHD1-209ENST00000583441 EFNA4P52798 201 aa0.86□□□□□ -2.27
SMCHD1-209ENST00000583441 PRB3Q04118 309 aaPredicted RBP0.86□□□□□ -2.27
SMCHD1-209ENST00000583441 Q8N6K4 173 aa0.86□□□□□ -2.27
SMCHD1-209ENST00000583441 OR4B1Q8NGF8 309 aa0.86□□□□□ -2.27
SMCHD1-209ENST00000583441 ZC2HC1AQ96GY0 325 aa0.86□□□□□ -2.27
SMCHD1-209ENST00000583441 OTORQ9NRC9 128 aa0.86□□□□□ -2.27
SMCHD1-209ENST00000583441 ROS1P08922 2347 aa0.86□□□□□ -2.27
SMCHD1-209ENST00000583441 TRPM1Q7Z4N2 1603 aa0.86□□□□□ -2.27
SMCHD1-209ENST00000583441 KIAA1549Q9HCM3 1950 aa0.85□□□□□ -2.27
SMCHD1-209ENST00000583441 E7EQ34 232 aa0.85□□□□□ -2.27
SMCHD1-209ENST00000583441 JMJD7-PLA2G4BH0Y9G9 81 aa0.85□□□□□ -2.27
SMCHD1-209ENST00000583441 FAM107AO95990 144 aa0.85□□□□□ -2.27
SMCHD1-209ENST00000583441 IGLV3-1P01715 115 aa0.85□□□□□ -2.27
SMCHD1-209ENST00000583441 IGHV3-33P01772 117 aa0.85□□□□□ -2.27
SMCHD1-209ENST00000583441 BCL2P10415 239 aa0.85□□□□□ -2.27
SMCHD1-209ENST00000583441 NDUFA6P56556 154 aa0.85□□□□□ -2.27
SMCHD1-209ENST00000583441 SPATA45Q537H7 98 aa0.85□□□□□ -2.27
SMCHD1-209ENST00000583441 LINC00575Q6W349 94 aa0.85□□□□□ -2.27
SMCHD1-209ENST00000583441 ANGPTL5Q86XS5 388 aa0.85□□□□□ -2.27
SMCHD1-209ENST00000583441 OR10AC1Q8NH08 325 aa0.85□□□□□ -2.27
SMCHD1-209ENST00000583441 CARD19Q96LW7 228 aa0.85□□□□□ -2.27
SMCHD1-209ENST00000583441 CST11Q9H112 138 aa0.85□□□□□ -2.27
SMCHD1-209ENST00000583441 LRTM1Q9HBL6 345 aa0.85□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms