RNA–Protein interactions for RNA: ENST00000583363.5

CDK5RAP3-228, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 558 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-228ENST00000583363 MCRIP2Q9BUT9 160 aaKnown RBP12.31□□□□□ -0.44
CDK5RAP3-228ENST00000583363 TMEM167BQ9NRX6 74 aa12.31□□□□□ -0.44
CDK5RAP3-228ENST00000583363 TRAV25A0A0B4J276 109 aa12.3□□□□□ -0.44
CDK5RAP3-228ENST00000583363 IGLV1-51P01701 117 aa12.3□□□□□ -0.44
CDK5RAP3-228ENST00000583363 PSMB3P49720 205 aa12.3□□□□□ -0.44
CDK5RAP3-228ENST00000583363 INSL3P51460 131 aa12.3□□□□□ -0.44
CDK5RAP3-228ENST00000583363 UBE2L3P68036 154 aaKnown RBP12.3□□□□□ -0.44
CDK5RAP3-228ENST00000583363 PMS2P11Q13670 270 aa12.3□□□□□ -0.44
CDK5RAP3-228ENST00000583363 GUK1Q16774 197 aa12.3□□□□□ -0.44
CDK5RAP3-228ENST00000583363 CD300EQ496F6 205 aaPredicted RBP12.3□□□□□ -0.44
CDK5RAP3-228ENST00000583363 C9orf66Q5T8R8 295 aa12.3□□□□□ -0.44
CDK5RAP3-228ENST00000583363 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.3□□□□□ -0.44
CDK5RAP3-228ENST00000583363 TRBV19A0A075B6N1 114 aa12.29□□□□□ -0.44
CDK5RAP3-228ENST00000583363 H3BTX0 84 aa12.29□□□□□ -0.44
CDK5RAP3-228ENST00000583363 TSPAN4O14817 238 aa12.29□□□□□ -0.44
CDK5RAP3-228ENST00000583363 MEOX2P50222 304 aa12.29□□□□□ -0.44
CDK5RAP3-228ENST00000583363 RBPMS2Q6ZRY4 209 aaKnown RBP12.29□□□□□ -0.44
CDK5RAP3-228ENST00000583363 IQCF2Q8IXL9 164 aa12.29□□□□□ -0.44
CDK5RAP3-228ENST00000583363 OR2K2Q8NGT1 345 aa12.29□□□□□ -0.44
CDK5RAP3-228ENST00000583363 BLNKQ8WV28 456 aa12.29□□□□□ -0.44
CDK5RAP3-228ENST00000583363 MS4A6AQ9H2W1 248 aa12.29□□□□□ -0.44
CDK5RAP3-228ENST00000583363 IGKV3-7A0A075B6H7 116 aa12.28□□□□□ -0.44
CDK5RAP3-228ENST00000583363 NDUFB4O95168 129 aa12.28□□□□□ -0.44
CDK5RAP3-228ENST00000583363 IGLL1P15814 213 aa12.28□□□□□ -0.44
CDK5RAP3-228ENST00000583363 TMEM61Q8N0U2 210 aa12.28□□□□□ -0.44
CDK5RAP3-228ENST00000583363 GBGT1Q8N5D6 347 aa12.28□□□□□ -0.44
CDK5RAP3-228ENST00000583363 NRN1Q9NPD7 142 aa12.28□□□□□ -0.44
CDK5RAP3-228ENST00000583363 IZUMO1RA6ND01 250 aa12.27□□□□□ -0.45
CDK5RAP3-228ENST00000583363 ZNF253O75346 499 aa12.27□□□□□ -0.45
CDK5RAP3-228ENST00000583363 PPT1P50897 306 aa12.27□□□□□ -0.45
CDK5RAP3-228ENST00000583363 PAFAH1B2P68402 229 aa12.27□□□□□ -0.45
CDK5RAP3-228ENST00000583363 PDE6HQ13956 83 aa12.27□□□□□ -0.45
CDK5RAP3-228ENST00000583363 DCANP1Q8TF63 244 aa12.27□□□□□ -0.45
CDK5RAP3-228ENST00000583363 TRAV2A0A0B4J234 112 aa12.26□□□□□ -0.45
CDK5RAP3-228ENST00000583363 DNASE2O00115 360 aaPredicted RBP12.26□□□□□ -0.45
CDK5RAP3-228ENST00000583363 SOCS3O14543 225 aa12.26□□□□□ -0.45
CDK5RAP3-228ENST00000583363 RANP62826 216 aaKnown RBP12.26□□□□□ -0.45
CDK5RAP3-228ENST00000583363 WFDC3Q8IUB2 231 aa12.26□□□□□ -0.45
CDK5RAP3-228ENST00000583363 GNG13Q9P2W3 67 aa12.26□□□□□ -0.45
CDK5RAP3-228ENST00000583363 TRAV8-2A0A0B4J237 113 aa12.25□□□□□ -0.45
CDK5RAP3-228ENST00000583363 A0A1W2PRE2 83 aa12.25□□□□□ -0.45
CDK5RAP3-228ENST00000583363 FAM74A7A6NL05 159 aa12.25□□□□□ -0.45
CDK5RAP3-228ENST00000583363 K7EQG2 157 aa12.25□□□□□ -0.45
CDK5RAP3-228ENST00000583363 SLC17A3O00476 420 aa12.25□□□□□ -0.45
CDK5RAP3-228ENST00000583363 PAGE4O60829 102 aa12.25□□□□□ -0.45
CDK5RAP3-228ENST00000583363 UBE2G2P60604 165 aa12.25□□□□□ -0.45
CDK5RAP3-228ENST00000583363 PSG9Q00887 426 aa12.25□□□□□ -0.45
CDK5RAP3-228ENST00000583363 LYPD1Q8N2G4 141 aa12.25□□□□□ -0.45
CDK5RAP3-228ENST00000583363 C16orf92Q96LL3 132 aa12.25□□□□□ -0.45
CDK5RAP3-228ENST00000583363 SPAG8Q99932 426 aaPredicted RBP12.25□□□□□ -0.45
CDK5RAP3-228ENST00000583363 SLC50A1Q9BRV3 221 aa12.25□□□□□ -0.45
CDK5RAP3-228ENST00000583363 ZNF331Q9NQX6 463 aaPredicted RBP12.25□□□□□ -0.45
CDK5RAP3-228ENST00000583363 YTHDF2Q9Y5A9 579 aaKnown RBP12.25□□□□□ -0.45
CDK5RAP3-228ENST00000583363 TFPI2P48307 235 aa12.24□□□□□ -0.45
CDK5RAP3-228ENST00000583363 SAMD13Q5VXD3 122 aa12.24□□□□□ -0.45
CDK5RAP3-228ENST00000583363 IGFL4Q6B9Z1 124 aa12.24□□□□□ -0.45
CDK5RAP3-228ENST00000583363 GPR61Q9BZJ8 451 aa12.24□□□□□ -0.45
CDK5RAP3-228ENST00000583363 Q9H3A6 140 aa12.24□□□□□ -0.45
CDK5RAP3-228ENST00000583363 MANBALQ9NQG1 85 aa12.24□□□□□ -0.45
CDK5RAP3-228ENST00000583363 ZNF256Q9Y2P7 627 aaPredicted RBP12.24□□□□□ -0.45
CDK5RAP3-228ENST00000583363 ARL2-SNX15V9GYD0 113 aa12.24□□□□□ -0.45
CDK5RAP3-228ENST00000583363 NOTCH3Q9UM47 2321 aa12.23□□□□□ -0.45
CDK5RAP3-228ENST00000583363 PGPA6NDG6 321 aa12.23□□□□□ -0.45
CDK5RAP3-228ENST00000583363 RBFOX3A6NFN3 312 aa12.23□□□□□ -0.45
CDK5RAP3-228ENST00000583363 ISLRO14498 428 aa12.23□□□□□ -0.45
CDK5RAP3-228ENST00000583363 IFNA1P01562 189 aa12.23□□□□□ -0.45
CDK5RAP3-228ENST00000583363 ID1P41134 155 aa12.23□□□□□ -0.45
CDK5RAP3-228ENST00000583363 GUCA2BQ16661 112 aa12.23□□□□□ -0.45
CDK5RAP3-228ENST00000583363 HAGHQ16775 308 aa12.23□□□□□ -0.45
CDK5RAP3-228ENST00000583363 LCN12Q6JVE5 192 aa12.23□□□□□ -0.45
CDK5RAP3-228ENST00000583363 EXOC3-AS1Q8N2X6 119 aa12.23□□□□□ -0.45
CDK5RAP3-228ENST00000583363 NKX6-2Q9C056 277 aaPredicted RBP12.23□□□□□ -0.45
CDK5RAP3-228ENST00000583363 OTORQ9NRC9 128 aa12.23□□□□□ -0.45
CDK5RAP3-228ENST00000583363 CLEC5AQ9NY25 188 aa12.23□□□□□ -0.45
CDK5RAP3-228ENST00000583363 HLA-DMBP28068 263 aa12.22□□□□□ -0.45
CDK5RAP3-228ENST00000583363 SUMO1P63165 101 aaKnown RBP12.22□□□□□ -0.45
CDK5RAP3-228ENST00000583363 ICAM4Q14773 271 aa12.22□□□□□ -0.45
CDK5RAP3-228ENST00000583363 BEAN1Q3B7T3 259 aa12.22□□□□□ -0.45
CDK5RAP3-228ENST00000583363 CST9LP1Q5W188 147 aa12.22□□□□□ -0.45
CDK5RAP3-228ENST00000583363 CCDC28AQ8IWP9 274 aa12.22□□□□□ -0.45
CDK5RAP3-228ENST00000583363 FAM24BQ8N5W8 94 aa12.22□□□□□ -0.45
CDK5RAP3-228ENST00000583363 C20orf173Q96LM9 149 aa12.22□□□□□ -0.45
CDK5RAP3-228ENST00000583363 FAM210AQ96ND0 272 aa12.22□□□□□ -0.45
CDK5RAP3-228ENST00000583363 RARRES2Q99969 163 aa12.22□□□□□ -0.45
CDK5RAP3-228ENST00000583363 MED9Q9NWA0 146 aa12.22□□□□□ -0.45
CDK5RAP3-228ENST00000583363 SORL1Q92673 2214 aa12.22□□□□□ -0.45
CDK5RAP3-228ENST00000583363 LOC102723971A0A1B0GUV8 181 aa12.21□□□□□ -0.45
CDK5RAP3-228ENST00000583363 LINC00862A6NCI5 91 aa12.21□□□□□ -0.45
CDK5RAP3-228ENST00000583363 OR4C46A6NHA9 309 aa12.21□□□□□ -0.45
CDK5RAP3-228ENST00000583363 BCL2P10415 239 aa12.21□□□□□ -0.45
CDK5RAP3-228ENST00000583363 TAGLN2P37802 199 aaKnown RBP12.21□□□□□ -0.45
CDK5RAP3-228ENST00000583363 PSG3Q16557 428 aa12.21□□□□□ -0.45
CDK5RAP3-228ENST00000583363 OXLD1Q5BKU9 147 aa12.21□□□□□ -0.45
CDK5RAP3-228ENST00000583363 AAMDCQ9H7C9 122 aa12.21□□□□□ -0.45
CDK5RAP3-228ENST00000583363 VAX2Q9UIW0 290 aa12.21□□□□□ -0.45
CDK5RAP3-228ENST00000583363 PRELID1Q9Y255 219 aa12.21□□□□□ -0.45
CDK5RAP3-228ENST00000583363 GGTLC3B5MD39 225 aa12.2□□□□□ -0.46
CDK5RAP3-228ENST00000583363 ATP5G3P48201 142 aa12.2□□□□□ -0.46
CDK5RAP3-228ENST00000583363 ZNF506Q5JVG8 444 aa12.2□□□□□ -0.46
CDK5RAP3-228ENST00000583363 RNF182Q8N6D2 247 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms