RNA–Protein interactions for RNA: ENST00000581226.1

SMCHD1-204, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 459 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-204ENST00000581226 ZDBF2Q9HCK1 2354 aa0.73□□□□□ -2.29
SMCHD1-204ENST00000581226 IGHV1-58A0A0C4DH39 117 aa0.73□□□□□ -2.29
SMCHD1-204ENST00000581226 AIPO00170 330 aa0.73□□□□□ -2.29
SMCHD1-204ENST00000581226 NUPR1O60356 82 aa0.73□□□□□ -2.29
SMCHD1-204ENST00000581226 NUP35Q8NFH5 326 aa0.73□□□□□ -2.29
SMCHD1-204ENST00000581226 OR5D16Q8NGK9 328 aa0.73□□□□□ -2.29
SMCHD1-204ENST00000581226 OR5D14Q8NGL3 314 aa0.73□□□□□ -2.29
SMCHD1-204ENST00000581226 NEK7Q8TDX7 302 aa0.73□□□□□ -2.29
SMCHD1-204ENST00000581226 C4orf3Q8WVX3 66 aa0.73□□□□□ -2.29
SMCHD1-204ENST00000581226 PLEKHB2Q96CS7 222 aa0.73□□□□□ -2.29
SMCHD1-204ENST00000581226 TP53RKQ96S44 253 aa0.73□□□□□ -2.29
SMCHD1-204ENST00000581226 BOLA2Q9H3K6 86 aa0.73□□□□□ -2.29
SMCHD1-204ENST00000581226 TAF9BQ9HBM6 251 aa0.73□□□□□ -2.29
SMCHD1-204ENST00000581226 GID8Q9NWU2 228 aa0.73□□□□□ -2.29
SMCHD1-204ENST00000581226 OR52A1Q9UKL2 312 aa0.73□□□□□ -2.29
SMCHD1-204ENST00000581226 ZNF462Q96JM2 2506 aa0.73□□□□□ -2.29
SMCHD1-204ENST00000581226 KLF7O75840 302 aaPredicted RBP0.72□□□□□ -2.29
SMCHD1-204ENST00000581226 OGNP20774 298 aaKnown RBP0.72□□□□□ -2.29
SMCHD1-204ENST00000581226 MYL5Q02045 173 aa0.72□□□□□ -2.29
SMCHD1-204ENST00000581226 SCGB2B2Q4G0G5 96 aa0.72□□□□□ -2.29
SMCHD1-204ENST00000581226 C4orf22Q6V702 233 aa0.72□□□□□ -2.29
SMCHD1-204ENST00000581226 PHF5AQ7RTV0 110 aaKnown RBP0.72□□□□□ -2.29
SMCHD1-204ENST00000581226 Q8N6K4 173 aa0.72□□□□□ -2.29
SMCHD1-204ENST00000581226 RAB37Q96AX2 223 aa0.72□□□□□ -2.29
SMCHD1-204ENST00000581226 OTORQ9NRC9 128 aa0.72□□□□□ -2.29
SMCHD1-204ENST00000581226 ASH1LQ9NR48 2969 aaKnown RBP0.71□□□□□ -2.3
SMCHD1-204ENST00000581226 DNAL4O96015 105 aa0.71□□□□□ -2.3
SMCHD1-204ENST00000581226 CDK6Q00534 326 aa0.71□□□□□ -2.3
SMCHD1-204ENST00000581226 FKBP1CQ5VVH2 108 aa0.71□□□□□ -2.3
SMCHD1-204ENST00000581226 C1orf140Q5VVS0 124 aa0.71□□□□□ -2.3
SMCHD1-204ENST00000581226 LINC00322Q6ZN03 302 aaPredicted RBP0.71□□□□□ -2.3
SMCHD1-204ENST00000581226 BORCS5Q969J3 196 aa0.71□□□□□ -2.3
SMCHD1-204ENST00000581226 CHCHD1Q96BP2 118 aaKnown RBP0.71□□□□□ -2.3
SMCHD1-204ENST00000581226 HYLS1Q96M11 299 aa0.71□□□□□ -2.3
SMCHD1-204ENST00000581226 PBDC1Q9BVG4 233 aa0.71□□□□□ -2.3
SMCHD1-204ENST00000581226 CACYBPQ9HB71 228 aaKnown RBP0.71□□□□□ -2.3
SMCHD1-204ENST00000581226 ORMDL1Q9P0S3 153 aa0.71□□□□□ -2.3
SMCHD1-204ENST00000581226 PBRM1Q86U86 1689 aa0.71□□□□□ -2.3
SMCHD1-204ENST00000581226 MUC4Q99102 2169 aa0.7□□□□□ -2.3
SMCHD1-204ENST00000581226 NCAPD3P42695 1498 aa0.7□□□□□ -2.3
SMCHD1-204ENST00000581226 CAMSAP2Q08AD1 1489 aa0.7□□□□□ -2.3
SMCHD1-204ENST00000581226 C17orf112F2Z3M2 114 aa0.7□□□□□ -2.3
SMCHD1-204ENST00000581226 H7BYZ3 331 aa0.7□□□□□ -2.3
SMCHD1-204ENST00000581226 M0R233 179 aa0.7□□□□□ -2.3
SMCHD1-204ENST00000581226 ERC2-IT1O76042 136 aa0.7□□□□□ -2.3
SMCHD1-204ENST00000581226 OR10J4P0C629 311 aa0.7□□□□□ -2.3
SMCHD1-204ENST00000581226 PSG9Q00887 426 aa0.7□□□□□ -2.3
SMCHD1-204ENST00000581226 FAM74A1Q5RGS3 127 aa0.7□□□□□ -2.3
SMCHD1-204ENST00000581226 MALSU1Q96EH3 234 aa0.7□□□□□ -2.3
SMCHD1-204ENST00000581226 AMELYQ99218 206 aa0.7□□□□□ -2.3
SMCHD1-204ENST00000581226 RTL8AQ9BWD3 113 aa0.7□□□□□ -2.3
SMCHD1-204ENST00000581226 IL20Q9NYY1 176 aa0.7□□□□□ -2.3
SMCHD1-204ENST00000581226 TECPR2O15040 1411 aa0.7□□□□□ -2.3
SMCHD1-204ENST00000581226 KDM6AO15550 1401 aaPredicted RBP0.7□□□□□ -2.3
SMCHD1-204ENST00000581226 TRAV5A0A0B4J249 113 aa0.69□□□□□ -2.3
SMCHD1-204ENST00000581226 CXCL8P10145 99 aa0.69□□□□□ -2.3
SMCHD1-204ENST00000581226 SPTBP11277 2137 aa0.69□□□□□ -2.3
SMCHD1-204ENST00000581226 S100A5P33763 92 aa0.69□□□□□ -2.3
SMCHD1-204ENST00000581226 RAB5CP51148 216 aa0.69□□□□□ -2.3
SMCHD1-204ENST00000581226 EFNA4P52798 201 aa0.69□□□□□ -2.3
SMCHD1-204ENST00000581226 KLRD1Q13241 179 aa0.69□□□□□ -2.3
SMCHD1-204ENST00000581226 OR4K15Q8NH41 348 aa0.69□□□□□ -2.3
SMCHD1-204ENST00000581226 MUCL1Q96DR8 90 aa0.69□□□□□ -2.3
SMCHD1-204ENST00000581226 ZCCHC11Q5TAX3 1644 aaKnown RBP0.68□□□□□ -2.3
SMCHD1-204ENST00000581226 E5RI56 91 aa0.68□□□□□ -2.3
SMCHD1-204ENST00000581226 C5orf67F2Z3F1 127 aa0.68□□□□□ -2.3
SMCHD1-204ENST00000581226 RER1O15258 196 aa0.68□□□□□ -2.3
SMCHD1-204ENST00000581226 IFNA14P01570 189 aa0.68□□□□□ -2.3
SMCHD1-204ENST00000581226 IDO1P14902 403 aa0.68□□□□□ -2.3
SMCHD1-204ENST00000581226 HBBP68871 147 aa0.68□□□□□ -2.3
SMCHD1-204ENST00000581226 EIF3IQ13347 325 aaKnown RBP0.68□□□□□ -2.3
SMCHD1-204ENST00000581226 RTL8BQ17RB0 113 aa0.68□□□□□ -2.3
SMCHD1-204ENST00000581226 FER1L6Q2WGJ9 1857 aa0.68□□□□□ -2.3
SMCHD1-204ENST00000581226 TMEM78Q5T7P6 136 aa0.68□□□□□ -2.3
SMCHD1-204ENST00000581226 C3orf33Q6P1S2 294 aa0.68□□□□□ -2.3
SMCHD1-204ENST00000581226 C2orf82Q6UX34 121 aa0.68□□□□□ -2.3
SMCHD1-204ENST00000581226 ARPINQ7Z6K5 226 aa0.68□□□□□ -2.3
SMCHD1-204ENST00000581226 PRR15Q8IV56 129 aa0.68□□□□□ -2.3
SMCHD1-204ENST00000581226 PSMF1Q92530 271 aa0.68□□□□□ -2.3
SMCHD1-204ENST00000581226 LRTM1Q9HBL6 345 aa0.68□□□□□ -2.3
SMCHD1-204ENST00000581226 TRAV27A0A087WT01 109 aa0.67□□□□□ -2.3
SMCHD1-204ENST00000581226 C9orf170A2RU37 121 aa0.67□□□□□ -2.3
SMCHD1-204ENST00000581226 HIST1H2BKO60814 126 aa0.67□□□□□ -2.3
SMCHD1-204ENST00000581226 APOA2P02652 100 aa0.67□□□□□ -2.3
SMCHD1-204ENST00000581226 HIST1H2BJP06899 126 aa0.67□□□□□ -2.3
SMCHD1-204ENST00000581226 SERPINB1P30740 379 aa0.67□□□□□ -2.3
SMCHD1-204ENST00000581226 OR5AS1Q8N127 324 aa0.67□□□□□ -2.3
SMCHD1-204ENST00000581226 STX19Q8N4C7 294 aa0.67□□□□□ -2.3
SMCHD1-204ENST00000581226 ZNF714Q96N38 554 aa0.67□□□□□ -2.3
SMCHD1-204ENST00000581226 BIN3Q9NQY0 253 aa0.67□□□□□ -2.3
SMCHD1-204ENST00000581226 SMPXQ9UHP9 88 aa0.67□□□□□ -2.3
SMCHD1-204ENST00000581226 ROCK1Q13464 1354 aa0.67□□□□□ -2.3
SMCHD1-204ENST00000581226 RTL9Q8NET4 1388 aa0.67□□□□□ -2.3
SMCHD1-204ENST00000581226 YTHDC2Q9H6S0 1430 aaKnown RBP0.66□□□□□ -2.3
SMCHD1-204ENST00000581226 hDV103S1A0JD37 113 aa0.66□□□□□ -2.3
SMCHD1-204ENST00000581226 F8W1H4 67 aa0.66□□□□□ -2.3
SMCHD1-204ENST00000581226 COX7CP15954 63 aa0.66□□□□□ -2.3
SMCHD1-204ENST00000581226 TCTAP57738 103 aa0.66□□□□□ -2.3
SMCHD1-204ENST00000581226 TMEM70Q9BUB7 260 aa0.66□□□□□ -2.3
SMCHD1-204ENST00000581226 OR2H1Q9GZK4 316 aa0.66□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 95.3 ms