RNA–Protein interactions for RNA: ENST00000580287.5

CDK5RAP3-217, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,609 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-217ENST00000580287 RASL11BQ9BPW5 248 aa9.97□□□□□ -0.81
CDK5RAP3-217ENST00000580287 SLC25A2Q9BXI2 301 aa9.97□□□□□ -0.81
CDK5RAP3-217ENST00000580287 MRPL32Q9BYC8 188 aaKnown RBP9.97□□□□□ -0.81
CDK5RAP3-217ENST00000580287 J3QLI3 93 aa9.96□□□□□ -0.81
CDK5RAP3-217ENST00000580287 EGR2P11161 476 aaPredicted RBP9.96□□□□□ -0.81
CDK5RAP3-217ENST00000580287 GNG4P50150 75 aa9.96□□□□□ -0.81
CDK5RAP3-217ENST00000580287 TPPP2P59282 170 aa9.96□□□□□ -0.81
CDK5RAP3-217ENST00000580287 YPEL3P61236 119 aaPredicted RBP9.96□□□□□ -0.81
CDK5RAP3-217ENST00000580287 BLCAPP62952 87 aa9.96□□□□□ -0.81
CDK5RAP3-217ENST00000580287 CENPWQ5EE01 88 aa9.96□□□□□ -0.81
CDK5RAP3-217ENST00000580287 PATE2Q6UY27 113 aa9.96□□□□□ -0.81
CDK5RAP3-217ENST00000580287 OR10G8Q8NGN5 311 aa9.96□□□□□ -0.81
CDK5RAP3-217ENST00000580287 ZNF48Q96MX3 618 aaPredicted RBP9.96□□□□□ -0.81
CDK5RAP3-217ENST00000580287 WNT10AQ9GZT5 417 aa9.96□□□□□ -0.81
CDK5RAP3-217ENST00000580287 PAM16Q9Y3D7 125 aa9.96□□□□□ -0.81
CDK5RAP3-217ENST00000580287 LINC00614P0C842 121 aa9.96□□□□□ -0.82
CDK5RAP3-217ENST00000580287 SELENOTP62341 195 aa9.96□□□□□ -0.82
CDK5RAP3-217ENST00000580287 SRSF2Q01130 221 aaKnown RBP9.96□□□□□ -0.82
CDK5RAP3-217ENST00000580287 ARPC1AQ92747 370 aa9.96□□□□□ -0.82
CDK5RAP3-217ENST00000580287 RNF2Q99496 336 aa9.96□□□□□ -0.82
CDK5RAP3-217ENST00000580287 PAXXQ9BUH6 204 aa9.96□□□□□ -0.82
CDK5RAP3-217ENST00000580287 PSMB11A5LHX3 300 aa9.95□□□□□ -0.82
CDK5RAP3-217ENST00000580287 G3V318 75 aa9.95□□□□□ -0.82
CDK5RAP3-217ENST00000580287 SERF1AO75920 110 aa9.95□□□□□ -0.82
CDK5RAP3-217ENST00000580287 KRTAP1-1Q07627 177 aa9.95□□□□□ -0.82
CDK5RAP3-217ENST00000580287 BATFQ16520 125 aa9.95□□□□□ -0.82
CDK5RAP3-217ENST00000580287 C5orf56Q8N8D9 126 aa9.95□□□□□ -0.82
CDK5RAP3-217ENST00000580287 BLNKQ8WV28 456 aa9.95□□□□□ -0.82
CDK5RAP3-217ENST00000580287 FAM167A-AS1Q96KT0 104 aa9.95□□□□□ -0.82
CDK5RAP3-217ENST00000580287 F11RQ9Y624 299 aaKnown RBP9.95□□□□□ -0.82
CDK5RAP3-217ENST00000580287 H3BTX0 84 aa9.95□□□□□ -0.82
CDK5RAP3-217ENST00000580287 PAFAH1B2P68402 229 aa9.95□□□□□ -0.82
CDK5RAP3-217ENST00000580287 TMEM183BQ1AE95 376 aa9.95□□□□□ -0.82
CDK5RAP3-217ENST00000580287 THAP8Q8NA92 274 aa9.95□□□□□ -0.82
CDK5RAP3-217ENST00000580287 C1RLQ9NZP8 487 aa9.95□□□□□ -0.82
CDK5RAP3-217ENST00000580287 ATP6V0E1O15342 81 aa9.94□□□□□ -0.82
CDK5RAP3-217ENST00000580287 IER3P46695 156 aa9.94□□□□□ -0.82
CDK5RAP3-217ENST00000580287 ECSCRQ19T08 205 aa9.94□□□□□ -0.82
CDK5RAP3-217ENST00000580287 KIAA1644Q3SXP7 199 aa9.94□□□□□ -0.82
CDK5RAP3-217ENST00000580287 OR8I2Q8N0Y5 310 aa9.94□□□□□ -0.82
CDK5RAP3-217ENST00000580287 C11orf52Q96A22 123 aa9.94□□□□□ -0.82
CDK5RAP3-217ENST00000580287 HIVEP1P15822 2718 aa9.94□□□□□ -0.82
CDK5RAP3-217ENST00000580287 CORTO00230 105 aa9.94□□□□□ -0.82
CDK5RAP3-217ENST00000580287 FSHBP01225 129 aa9.94□□□□□ -0.82
CDK5RAP3-217ENST00000580287 MGST1P10620 155 aaKnown RBP9.94□□□□□ -0.82
CDK5RAP3-217ENST00000580287 ESDP10768 282 aa9.94□□□□□ -0.82
CDK5RAP3-217ENST00000580287 LEMD1Q68G75 181 aa9.94□□□□□ -0.82
CDK5RAP3-217ENST00000580287 VN1R17PQ8TDU5 208 aa9.94□□□□□ -0.82
CDK5RAP3-217ENST00000580287 VAMP8Q9BV40 100 aa9.94□□□□□ -0.82
CDK5RAP3-217ENST00000580287 BAHCC1Q9P281 2608 aa9.94□□□□□ -0.82
CDK5RAP3-217ENST00000580287 RANP62826 216 aaKnown RBP9.93□□□□□ -0.82
CDK5RAP3-217ENST00000580287 RPH3ALQ9UNE2 315 aa9.93□□□□□ -0.82
CDK5RAP3-217ENST00000580287 A0A1W2PRE2 83 aa9.93□□□□□ -0.82
CDK5RAP3-217ENST00000580287 A6NDX4 124 aa9.93□□□□□ -0.82
CDK5RAP3-217ENST00000580287 CRISP2P16562 243 aa9.93□□□□□ -0.82
CDK5RAP3-217ENST00000580287 LYZP61626 148 aa9.93□□□□□ -0.82
CDK5RAP3-217ENST00000580287 TIGITQ495A1 244 aa9.93□□□□□ -0.82
CDK5RAP3-217ENST00000580287 Q71RC1 249 aaPredicted RBP9.93□□□□□ -0.82
CDK5RAP3-217ENST00000580287 MRPL18Q9H0U6 180 aaKnown RBP9.93□□□□□ -0.82
CDK5RAP3-217ENST00000580287 ARL2-SNX15V9GYD0 113 aa9.93□□□□□ -0.82
CDK5RAP3-217ENST00000580287 C9JCJ5 164 aa9.92□□□□□ -0.82
CDK5RAP3-217ENST00000580287 HLA-DRB1P01911 266 aa9.92□□□□□ -0.82
CDK5RAP3-217ENST00000580287 CRYGCP07315 174 aa9.92□□□□□ -0.82
CDK5RAP3-217ENST00000580287 TFPI2P48307 235 aa9.92□□□□□ -0.82
CDK5RAP3-217ENST00000580287 DMRTA1Q5VZB9 504 aa9.92□□□□□ -0.82
CDK5RAP3-217ENST00000580287 TMEM116Q8NCL8 245 aa9.92□□□□□ -0.82
CDK5RAP3-217ENST00000580287 CITED1Q99966 193 aa9.92□□□□□ -0.82
CDK5RAP3-217ENST00000580287 YAE1D1Q9NRH1 226 aa9.92□□□□□ -0.82
CDK5RAP3-217ENST00000580287 MOB4Q9Y3A3 225 aa9.92□□□□□ -0.82
CDK5RAP3-217ENST00000580287 RNF114Q9Y508 228 aa9.92□□□□□ -0.82
CDK5RAP3-217ENST00000580287 SETD2Q9BYW2 2564 aaPredicted RBP9.92□□□□□ -0.82
CDK5RAP3-217ENST00000580287 ANK3Q12955 4377 aaKnown RBP9.92□□□□□ -0.82
CDK5RAP3-217ENST00000580287 HYPMO75409 117 aa9.92□□□□□ -0.82
CDK5RAP3-217ENST00000580287 IGHV3-23P01764 117 aa9.92□□□□□ -0.82
CDK5RAP3-217ENST00000580287 SAPCD1Q5SSQ6 148 aa9.92□□□□□ -0.82
CDK5RAP3-217ENST00000580287 TRGV9Q99603 122 aa9.92□□□□□ -0.82
CDK5RAP3-217ENST00000580287 SERTAD4Q9NUC0 356 aa9.92□□□□□ -0.82
CDK5RAP3-217ENST00000580287 HOXA3O43365 443 aaPredicted RBP9.91□□□□□ -0.82
CDK5RAP3-217ENST00000580287 CDKN1BP46527 198 aa9.91□□□□□ -0.82
CDK5RAP3-217ENST00000580287 MRPL54Q6P161 138 aaKnown RBP9.91□□□□□ -0.82
CDK5RAP3-217ENST00000580287 V9GYV3 84 aa9.91□□□□□ -0.82
CDK5RAP3-217ENST00000580287 GNG5P63218 68 aa9.91□□□□□ -0.82
CDK5RAP3-217ENST00000580287 UNQ5815/PRO19632Q6UWF5 114 aa9.91□□□□□ -0.82
CDK5RAP3-217ENST00000580287 BAGE3Q86Y29 109 aa9.91□□□□□ -0.82
CDK5RAP3-217ENST00000580287 BAGE2Q86Y30 109 aa9.91□□□□□ -0.82
CDK5RAP3-217ENST00000580287 OR1L6Q8NGR2 347 aa9.91□□□□□ -0.82
CDK5RAP3-217ENST00000580287 FANCD2OSQ96PS1 177 aa9.91□□□□□ -0.82
CDK5RAP3-217ENST00000580287 IL36BQ9NZH7 164 aa9.91□□□□□ -0.82
CDK5RAP3-217ENST00000580287 FBXL7Q9UJT9 491 aa9.91□□□□□ -0.82
CDK5RAP3-217ENST00000580287 HIVEP2P31629 2446 aa9.91□□□□□ -0.82
CDK5RAP3-217ENST00000580287 SNURFLB1AK76 121 aa9.9□□□□□ -0.82
CDK5RAP3-217ENST00000580287 PSG1P11464 419 aa9.9□□□□□ -0.82
CDK5RAP3-217ENST00000580287 SLAQ13239 276 aa9.9□□□□□ -0.82
CDK5RAP3-217ENST00000580287 COL5A1-AS1Q5SY13 56 aa9.9□□□□□ -0.82
CDK5RAP3-217ENST00000580287 FXYD5Q96DB9 178 aa9.9□□□□□ -0.82
CDK5RAP3-217ENST00000580287 SAMD10Q9BYL1 202 aa9.9□□□□□ -0.82
CDK5RAP3-217ENST00000580287 OR2J3O76001 311 aa9.9□□□□□ -0.82
CDK5RAP3-217ENST00000580287 PRR27Q6MZM9 219 aa9.9□□□□□ -0.82
CDK5RAP3-217ENST00000580287 Q8N976 141 aa9.9□□□□□ -0.82
CDK5RAP3-217ENST00000580287 I3L2K1 104 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms