RNA–Protein interactions for RNA: ENST00000579483.1

MSI2-209, Transcript of musashi RNA binding protein 2, humanhuman

TSL 1 (best)

Gene MSI2, Length 5,141 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSI2-209ENST00000579483 PHF3Q92576 2039 aaKnown RBP8.16□□□□□ -1.1
MSI2-209ENST00000579483 COL4A4P53420 1690 aaPredicted RBP8.16□□□□□ -1.1
MSI2-209ENST00000579483 TRAV5A0A0B4J249 113 aa8.16□□□□□ -1.1
MSI2-209ENST00000579483 CD5LO43866 347 aa8.16□□□□□ -1.1
MSI2-209ENST00000579483 CD28P10747 220 aa8.16□□□□□ -1.1
MSI2-209ENST00000579483 HIST1H4GQ99525 98 aa8.16□□□□□ -1.1
MSI2-209ENST00000579483 SPAG8Q99932 426 aaPredicted RBP8.16□□□□□ -1.1
MSI2-209ENST00000579483 DUX4L9Q6RFH8 374 aaPredicted RBP8.16□□□□□ -1.1
MSI2-209ENST00000579483 C12orf57Q99622 126 aa8.16□□□□□ -1.1
MSI2-209ENST00000579483 TRAV1-1A0A0B4J248 108 aa8.16□□□□□ -1.1
MSI2-209ENST00000579483 MORN3Q6PF18 240 aaPredicted RBP8.16□□□□□ -1.1
MSI2-209ENST00000579483 Q8NFD4 153 aa8.16□□□□□ -1.1
MSI2-209ENST00000579483 MALRD1Q5VYJ5 2156 aa8.16□□□□□ -1.1
MSI2-209ENST00000579483 ABCA1O95477 2261 aa8.16□□□□□ -1.1
MSI2-209ENST00000579483 CADP27708 2225 aa8.16□□□□□ -1.1
MSI2-209ENST00000579483 NUDT11Q96G61 164 aa8.16□□□□□ -1.1
MSI2-209ENST00000579483 PKIGQ9Y2B9 76 aa8.16□□□□□ -1.1
MSI2-209ENST00000579483 FOXA3P55318 350 aaPredicted RBP8.15□□□□□ -1.1
MSI2-209ENST00000579483 Q5BKY6 102 aa8.15□□□□□ -1.1
MSI2-209ENST00000579483 EXOC3-AS1Q8N2X6 119 aa8.15□□□□□ -1.1
MSI2-209ENST00000579483 SLC25A20O43772 301 aa8.15□□□□□ -1.1
MSI2-209ENST00000579483 IGHV4-38-2P0DP08 117 aa8.15□□□□□ -1.1
MSI2-209ENST00000579483 BTCP35070 178 aa8.15□□□□□ -1.1
MSI2-209ENST00000579483 FXYD7P58549 80 aa8.15□□□□□ -1.1
MSI2-209ENST00000579483 KIAA1644Q3SXP7 199 aa8.15□□□□□ -1.1
MSI2-209ENST00000579483 PLXND1Q9Y4D7 1925 aa8.15□□□□□ -1.11
MSI2-209ENST00000579483 A0A087WWC5 75 aa8.15□□□□□ -1.11
MSI2-209ENST00000579483 MUC21A0A0G2JKD1 596 aa8.15□□□□□ -1.11
MSI2-209ENST00000579483 MUC21A0A140T8X8 626 aa8.15□□□□□ -1.11
MSI2-209ENST00000579483 VCYO14598 125 aa8.15□□□□□ -1.11
MSI2-209ENST00000579483 TRGC2P03986 189 aa8.15□□□□□ -1.11
MSI2-209ENST00000579483 CKS1BP61024 79 aa8.15□□□□□ -1.11
MSI2-209ENST00000579483 LBHQ53QV2 105 aaPredicted RBP8.15□□□□□ -1.11
MSI2-209ENST00000579483 SMIM12Q96EX1 92 aa8.15□□□□□ -1.11
MSI2-209ENST00000579483 KIF26AQ9ULI4 1882 aaPredicted RBP8.15□□□□□ -1.11
MSI2-209ENST00000579483 IGKV1-6A0A0C4DH72 117 aa8.15□□□□□ -1.11
MSI2-209ENST00000579483 SLC17A3O00476 420 aa8.15□□□□□ -1.11
MSI2-209ENST00000579483 TMEM256Q8N2U0 113 aa8.15□□□□□ -1.11
MSI2-209ENST00000579483 NRGNQ92686 78 aa8.15□□□□□ -1.11
MSI2-209ENST00000579483 FOXC2Q99958 501 aa8.15□□□□□ -1.11
MSI2-209ENST00000579483 SPXQ9BT56 116 aa8.15□□□□□ -1.11
MSI2-209ENST00000579483 A8MWV9 139 aa8.14□□□□□ -1.11
MSI2-209ENST00000579483 HOXD3P31249 432 aaPredicted RBP8.14□□□□□ -1.11
MSI2-209ENST00000579483 CD300CQ08708 224 aa8.14□□□□□ -1.11
MSI2-209ENST00000579483 ZNF876PQ49A33 203 aa8.14□□□□□ -1.11
MSI2-209ENST00000579483 TMEM160Q9NX00 188 aa8.14□□□□□ -1.11
MSI2-209ENST00000579483 JKAMPQ9P055 326 aa8.14□□□□□ -1.11
MSI2-209ENST00000579483 LY96Q9Y6Y9 160 aa8.14□□□□□ -1.11
MSI2-209ENST00000579483 CDKN1BP46527 198 aa8.14□□□□□ -1.11
MSI2-209ENST00000579483 RNF144BQ7Z419 303 aa8.14□□□□□ -1.11
MSI2-209ENST00000579483 SS18Q15532 418 aa8.14□□□□□ -1.11
MSI2-209ENST00000579483 PUSL1Q8N0Z8 303 aaKnown RBP8.14□□□□□ -1.11
MSI2-209ENST00000579483 H0YIZ8 118 aa8.14□□□□□ -1.11
MSI2-209ENST00000579483 IGHV3-53P01767 116 aa8.14□□□□□ -1.11
MSI2-209ENST00000579483 GP9P14770 177 aa8.14□□□□□ -1.11
MSI2-209ENST00000579483 ZNF524Q96C55 264 aa8.14□□□□□ -1.11
MSI2-209ENST00000579483 ZNRD1Q9P1U0 126 aa8.14□□□□□ -1.11
MSI2-209ENST00000579483 GZMBP10144 247 aa8.13□□□□□ -1.11
MSI2-209ENST00000579483 PLA2G2AP14555 144 aa8.13□□□□□ -1.11
MSI2-209ENST00000579483 CBLN1P23435 193 aa8.13□□□□□ -1.11
MSI2-209ENST00000579483 NPBQ8NG41 125 aa8.13□□□□□ -1.11
MSI2-209ENST00000579483 DOCK9Q9BZ29 2069 aa8.13□□□□□ -1.11
MSI2-209ENST00000579483 GCSAMLQ5JQS6 135 aa8.13□□□□□ -1.11
MSI2-209ENST00000579483 FOXI2Q6ZQN5 318 aa8.13□□□□□ -1.11
MSI2-209ENST00000579483 C11orf53Q8IXP5 236 aa8.13□□□□□ -1.11
MSI2-209ENST00000579483 SMPXQ9UHP9 88 aa8.13□□□□□ -1.11
MSI2-209ENST00000579483 AGMATQ9BSE5 352 aa8.13□□□□□ -1.11
MSI2-209ENST00000579483 IGHV1OR15-1A0A075B7D0 117 aa8.13□□□□□ -1.11
MSI2-209ENST00000579483 RPL23P62829 140 aaKnown RBP8.13□□□□□ -1.11
MSI2-209ENST00000579483 SLC25A34Q6PIV7 304 aa8.13□□□□□ -1.11
MSI2-209ENST00000579483 IMMP2LQ96T52 175 aa8.13□□□□□ -1.11
MSI2-209ENST00000579483 ANAPC10Q9UM13 185 aa8.13□□□□□ -1.11
MSI2-209ENST00000579483 ANKHD1Q8IWZ3 2542 aaKnown RBP8.12□□□□□ -1.11
MSI2-209ENST00000579483 TRAV25A0A0B4J276 109 aa8.12□□□□□ -1.11
MSI2-209ENST00000579483 PPIFP30405 207 aaKnown RBP8.12□□□□□ -1.11
MSI2-209ENST00000579483 KRTAP27-1Q3LI81 207 aa8.12□□□□□ -1.11
MSI2-209ENST00000579483 CIDEAO60543 219 aa8.12□□□□□ -1.11
MSI2-209ENST00000579483 MDKP21741 143 aaPredicted RBP8.12□□□□□ -1.11
MSI2-209ENST00000579483 ERCC8Q13216 396 aa8.12□□□□□ -1.11
MSI2-209ENST00000579483 DMRTA1Q5VZB9 504 aa8.12□□□□□ -1.11
MSI2-209ENST00000579483 SHISA2Q6UWI4 295 aa8.12□□□□□ -1.11
MSI2-209ENST00000579483 C1orf147Q96MC9 270 aaPredicted RBP8.12□□□□□ -1.11
MSI2-209ENST00000579483 C18orf15Q96N68 181 aa8.12□□□□□ -1.11
MSI2-209ENST00000579483 RNASE7Q9H1E1 156 aaKnown RBP8.12□□□□□ -1.11
MSI2-209ENST00000579483 ZNF581Q9P0T4 197 aa8.12□□□□□ -1.11
MSI2-209ENST00000579483 MMP23AO75900 390 aa8.12□□□□□ -1.11
MSI2-209ENST00000579483 FSTL3O95633 263 aa8.12□□□□□ -1.11
MSI2-209ENST00000579483 HBDP02042 147 aa8.12□□□□□ -1.11
MSI2-209ENST00000579483 DNLZQ5SXM8 178 aa8.12□□□□□ -1.11
MSI2-209ENST00000579483 RASL11AQ6T310 242 aa8.12□□□□□ -1.11
MSI2-209ENST00000579483 RNF182Q8N6D2 247 aa8.12□□□□□ -1.11
MSI2-209ENST00000579483 LOC102724200A0A096LPH7 203 aaPredicted RBP8.11□□□□□ -1.11
MSI2-209ENST00000579483 SH2D1AO60880 128 aa8.11□□□□□ -1.11
MSI2-209ENST00000579483 RPLP1P05386 114 aaKnown RBP8.11□□□□□ -1.11
MSI2-209ENST00000579483 C8orf86Q6ZUL3 223 aa8.11□□□□□ -1.11
MSI2-209ENST00000579483 RNF152Q8N8N0 203 aa8.11□□□□□ -1.11
MSI2-209ENST00000579483 TMEM14CQ9P0S9 112 aa8.11□□□□□ -1.11
MSI2-209ENST00000579483 SELENOKQ9Y6D0 94 aa8.11□□□□□ -1.11
MSI2-209ENST00000579483 LRRK1Q38SD2 2015 aa8.11□□□□□ -1.11
MSI2-209ENST00000579483 TNFRSF13BO14836 293 aaPredicted RBP8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 103.4 ms