RNA–Protein interactions for RNA: ENST00000579316.5

CSNK1D-211, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 692 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-211ENST00000579316 SERTAD4-AS1Q5TG53 156 aa9.65□□□□□ -0.86
CSNK1D-211ENST00000579316 THAP8Q8NA92 274 aa9.65□□□□□ -0.86
CSNK1D-211ENST00000579316 OR51G1Q8NGK1 321 aa9.65□□□□□ -0.86
CSNK1D-211ENST00000579316 PPP1R1CQ8WVI7 109 aa9.65□□□□□ -0.86
CSNK1D-211ENST00000579316 C17orf77Q96MU5 243 aa9.65□□□□□ -0.86
CSNK1D-211ENST00000579316 TRGV9Q99603 122 aa9.65□□□□□ -0.86
CSNK1D-211ENST00000579316 GGACTQ9BVM4 153 aa9.65□□□□□ -0.86
CSNK1D-211ENST00000579316 Q9H8V8 135 aa9.65□□□□□ -0.86
CSNK1D-211ENST00000579316 PFDN2Q9UHV9 154 aa9.65□□□□□ -0.86
CSNK1D-211ENST00000579316 IGHV3OR16-12A0A075B7B8 117 aa9.64□□□□□ -0.87
CSNK1D-211ENST00000579316 LOC102723971A0A1B0GUV8 181 aa9.64□□□□□ -0.87
CSNK1D-211ENST00000579316 PMS2P5A8MQ11 134 aa9.64□□□□□ -0.87
CSNK1D-211ENST00000579316 IL4P05112 153 aa9.64□□□□□ -0.87
CSNK1D-211ENST00000579316 PSG1P11464 419 aa9.64□□□□□ -0.87
CSNK1D-211ENST00000579316 NUP62P37198 522 aaPredicted RBP9.64□□□□□ -0.87
CSNK1D-211ENST00000579316 EIF2B2P49770 351 aaKnown RBP9.64□□□□□ -0.87
CSNK1D-211ENST00000579316 SULT1A1P50225 295 aa9.64□□□□□ -0.87
CSNK1D-211ENST00000579316 RRAS2P62070 204 aaPredicted RBP9.64□□□□□ -0.87
CSNK1D-211ENST00000579316 SNRPD3P62318 126 aaKnown RBP9.64□□□□□ -0.87
CSNK1D-211ENST00000579316 TMEM144Q7Z5S9 345 aa9.64□□□□□ -0.87
CSNK1D-211ENST00000579316 ASB13Q8WXK3 278 aa9.64□□□□□ -0.87
CSNK1D-211ENST00000579316 SLC25A31Q9H0C2 315 aa9.64□□□□□ -0.87
CSNK1D-211ENST00000579316 C11orf1Q9H5F2 150 aa9.64□□□□□ -0.87
CSNK1D-211ENST00000579316 NPVFQ9HCQ7 196 aa9.64□□□□□ -0.87
CSNK1D-211ENST00000579316 U3KQE9 123 aa9.64□□□□□ -0.87
CSNK1D-211ENST00000579316 DNAH8Q96JB1 4490 aa9.63□□□□□ -0.87
CSNK1D-211ENST00000579316 LRP1Q07954 4544 aaKnown RBP9.63□□□□□ -0.87
CSNK1D-211ENST00000579316 FAM24AA6NFZ4 105 aa9.63□□□□□ -0.87
CSNK1D-211ENST00000579316 KRTAP29-1A8MX34 341 aaPredicted RBP9.63□□□□□ -0.87
CSNK1D-211ENST00000579316 CCNKO75909 580 aa9.63□□□□□ -0.87
CSNK1D-211ENST00000579316 S100A7P31151 101 aa9.63□□□□□ -0.87
CSNK1D-211ENST00000579316 SLC38A11Q08AI6 406 aa9.63□□□□□ -0.87
CSNK1D-211ENST00000579316 Q6ZSN1 163 aa9.63□□□□□ -0.87
CSNK1D-211ENST00000579316 SSX7Q7RTT5 188 aa9.63□□□□□ -0.87
CSNK1D-211ENST00000579316 TMEM252Q8N6L7 170 aa9.63□□□□□ -0.87
CSNK1D-211ENST00000579316 ZNF709Q8N972 641 aa9.63□□□□□ -0.87
CSNK1D-211ENST00000579316 BPIFCQ8NFQ6 507 aa9.63□□□□□ -0.87
CSNK1D-211ENST00000579316 RNF125Q96EQ8 232 aa9.63□□□□□ -0.87
CSNK1D-211ENST00000579316 ZNF503Q96F45 646 aa9.63□□□□□ -0.87
CSNK1D-211ENST00000579316 CLUHP3Q96NS8 147 aa9.63□□□□□ -0.87
CSNK1D-211ENST00000579316 IGKV1D-37A0A075B6S9 117 aa9.62□□□□□ -0.87
CSNK1D-211ENST00000579316 FAM229AH3BQW9 127 aa9.62□□□□□ -0.87
CSNK1D-211ENST00000579316 CST7O76096 145 aa9.62□□□□□ -0.87
CSNK1D-211ENST00000579316 MPC2O95563 127 aa9.62□□□□□ -0.87
CSNK1D-211ENST00000579316 NUDT3O95989 172 aa9.62□□□□□ -0.87
CSNK1D-211ENST00000579316 HBE1P02100 147 aa9.62□□□□□ -0.87
CSNK1D-211ENST00000579316 HNRNPCP07910 306 aaKnown RBP eCLIP9.62□□□□□ -0.872e-7■■□□□ 13.4
CSNK1D-211ENST00000579316 S100A11P31949 105 aa9.62□□□□□ -0.87
CSNK1D-211ENST00000579316 AP2S1P53680 142 aaPredicted RBP9.62□□□□□ -0.87
CSNK1D-211ENST00000579316 SELENOTP62341 195 aa9.62□□□□□ -0.87
CSNK1D-211ENST00000579316 ZNF90Q03938 601 aa9.62□□□□□ -0.87
CSNK1D-211ENST00000579316 FCN2Q15485 313 aa9.62□□□□□ -0.87
CSNK1D-211ENST00000579316 USF2Q15853 346 aaPredicted RBP9.62□□□□□ -0.87
CSNK1D-211ENST00000579316 TEPPQ6URK8 271 aa9.62□□□□□ -0.87
CSNK1D-211ENST00000579316 THAP6Q8TBB0 222 aa9.62□□□□□ -0.87
CSNK1D-211ENST00000579316 GLMPQ8WWB7 406 aa9.62□□□□□ -0.87
CSNK1D-211ENST00000579316 PBDC1Q9BVG4 233 aa9.62□□□□□ -0.87
CSNK1D-211ENST00000579316 RNF213Q63HN8 5207 aa9.62□□□□□ -0.87
CSNK1D-211ENST00000579316 IGKV1OR2-108A0A075B7D4 117 aa9.61□□□□□ -0.87
CSNK1D-211ENST00000579316 IGSF23A1L1A6 192 aa9.61□□□□□ -0.87
CSNK1D-211ENST00000579316 SMR3BP02814 79 aaPredicted RBP9.61□□□□□ -0.87
CSNK1D-211ENST00000579316 CXCL3P19876 107 aa9.61□□□□□ -0.87
CSNK1D-211ENST00000579316 LYZP61626 148 aa9.61□□□□□ -0.87
CSNK1D-211ENST00000579316 BAXQ07812 192 aa9.61□□□□□ -0.87
CSNK1D-211ENST00000579316 FGL1Q08830 312 aa9.61□□□□□ -0.87
CSNK1D-211ENST00000579316 OR2F1Q13607 317 aa9.61□□□□□ -0.87
CSNK1D-211ENST00000579316 RAB31Q13636 194 aa9.61□□□□□ -0.87
CSNK1D-211ENST00000579316 ATP6V1FQ16864 119 aa9.61□□□□□ -0.87
CSNK1D-211ENST00000579316 C16orf54Q6UWD8 224 aa9.61□□□□□ -0.87
CSNK1D-211ENST00000579316 Q6ZRN7 208 aaPredicted RBP9.61□□□□□ -0.87
CSNK1D-211ENST00000579316 C1orf158Q8N1D5 194 aa9.61□□□□□ -0.87
CSNK1D-211ENST00000579316 SYT8Q8NBV8 401 aa9.61□□□□□ -0.87
CSNK1D-211ENST00000579316 OR11H7Q8NGC8 314 aa9.61□□□□□ -0.87
CSNK1D-211ENST00000579316 TMEM147Q9BVK8 224 aa9.61□□□□□ -0.87
CSNK1D-211ENST00000579316 UQCC1Q9NVA1 299 aa9.61□□□□□ -0.87
CSNK1D-211ENST00000579316 OR5AC2Q9NZP5 309 aa9.61□□□□□ -0.87
CSNK1D-211ENST00000579316 GOLT1BQ9Y3E0 138 aa9.61□□□□□ -0.87
CSNK1D-211ENST00000579316 GIPP09681 153 aaPredicted RBP9.6□□□□□ -0.87
CSNK1D-211ENST00000579316 KRTAP10-1P60331 282 aa9.6□□□□□ -0.87
CSNK1D-211ENST00000579316 ARL16Q0P5N6 197 aa9.6□□□□□ -0.87
CSNK1D-211ENST00000579316 ICAM4Q14773 271 aa9.6□□□□□ -0.87
CSNK1D-211ENST00000579316 RRN3P1Q2M238 152 aa9.6□□□□□ -0.87
CSNK1D-211ENST00000579316 GDF5OSQ5U4N7 250 aa9.6□□□□□ -0.87
CSNK1D-211ENST00000579316 CYP2G1PQ6ZSU1 146 aa9.6□□□□□ -0.87
CSNK1D-211ENST00000579316 S100A7AQ86SG5 101 aa9.6□□□□□ -0.87
CSNK1D-211ENST00000579316 ZNF546Q86UE3 836 aa9.6□□□□□ -0.87
CSNK1D-211ENST00000579316 PPP1R14BQ96C90 147 aa9.6□□□□□ -0.87
CSNK1D-211ENST00000579316 UPK3BQ9BT76 320 aa9.6□□□□□ -0.87
CSNK1D-211ENST00000579316 NRN1Q9NPD7 142 aa9.6□□□□□ -0.87
CSNK1D-211ENST00000579316 FAT3Q8TDW7 4589 aa9.6□□□□□ -0.87
CSNK1D-211ENST00000579316 LYRM9A8MSI8 78 aa9.59□□□□□ -0.87
CSNK1D-211ENST00000579316 H0YIZ8 118 aa9.59□□□□□ -0.87
CSNK1D-211ENST00000579316 FXYD7P58549 80 aa9.59□□□□□ -0.87
CSNK1D-211ENST00000579316 RAP2BP61225 183 aa9.59□□□□□ -0.87
CSNK1D-211ENST00000579316 RNF141Q8WVD5 230 aa9.59□□□□□ -0.87
CSNK1D-211ENST00000579316 MBD2Q9UBB5 411 aa9.59□□□□□ -0.87
CSNK1D-211ENST00000579316 SLC45A2Q9UMX9 530 aa9.59□□□□□ -0.87
CSNK1D-211ENST00000579316 UBE2L5PA0A1B0GUS4 154 aa9.58□□□□□ -0.88
CSNK1D-211ENST00000579316 F5H768 121 aa9.58□□□□□ -0.88
CSNK1D-211ENST00000579316 LINC00869P0C866 280 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms