RNA–Protein interactions for RNA: ENST00000579308.1

CSNK1D-210, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 598 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-210ENST00000579308 PATE2Q6UY27 113 aa7.41□□□□□ -1.22
CSNK1D-210ENST00000579308 SSX7Q7RTT5 188 aa7.41□□□□□ -1.22
CSNK1D-210ENST00000579308 TOMM5Q8N4H5 51 aa7.41□□□□□ -1.22
CSNK1D-210ENST00000579308 LINC00612Q8N6U2 182 aa7.41□□□□□ -1.22
CSNK1D-210ENST00000579308 RNASE8Q8TDE3 154 aaKnown RBP7.41□□□□□ -1.22
CSNK1D-210ENST00000579308 TIMM8BQ9Y5J9 83 aaPredicted RBP7.41□□□□□ -1.22
CSNK1D-210ENST00000579308 H3BMQ9 156 aa7.4□□□□□ -1.22
CSNK1D-210ENST00000579308 RAP2BP61225 183 aa7.4□□□□□ -1.22
CSNK1D-210ENST00000579308 SELENOTP62341 195 aa7.4□□□□□ -1.22
CSNK1D-210ENST00000579308 RHOBP62745 196 aa7.4□□□□□ -1.22
CSNK1D-210ENST00000579308 C4orf46Q504U0 113 aa7.4□□□□□ -1.22
CSNK1D-210ENST00000579308 PYDC2Q56P42 97 aa7.4□□□□□ -1.22
CSNK1D-210ENST00000579308 ZNF493Q6ZR52 646 aa7.4□□□□□ -1.22
CSNK1D-210ENST00000579308 Q8N1X5 172 aa7.4□□□□□ -1.22
CSNK1D-210ENST00000579308 MAPKAPK5-AS1Q8N8E1 139 aa7.4□□□□□ -1.22
CSNK1D-210ENST00000579308 MCFD2Q8NI22 146 aa7.4□□□□□ -1.22
CSNK1D-210ENST00000579308 DEDD2Q8WXF8 326 aa7.4□□□□□ -1.22
CSNK1D-210ENST00000579308 ZNF503Q96F45 646 aa7.4□□□□□ -1.22
CSNK1D-210ENST00000579308 C16orf74Q96GX8 76 aa7.4□□□□□ -1.22
CSNK1D-210ENST00000579308 SMIM8Q96KF7 97 aa7.4□□□□□ -1.22
CSNK1D-210ENST00000579308 UHRF2Q96PU4 802 aa7.4□□□□□ -1.22
CSNK1D-210ENST00000579308 KRTAP1-5Q9BYS1 174 aa7.4□□□□□ -1.22
CSNK1D-210ENST00000579308 Q9H8V8 135 aa7.4□□□□□ -1.22
CSNK1D-210ENST00000579308 NOP10Q9NPE3 64 aaKnown RBP7.4□□□□□ -1.22
CSNK1D-210ENST00000579308 V9GYH0 126 aa7.4□□□□□ -1.22
CSNK1D-210ENST00000579308 HERC1Q15751 4861 aa7.39□□□□□ -1.23
CSNK1D-210ENST00000579308 FNDC10F2Z333 226 aa7.39□□□□□ -1.23
CSNK1D-210ENST00000579308 ADAP1O75689 374 aa7.39□□□□□ -1.23
CSNK1D-210ENST00000579308 CCNKO75909 580 aa7.39□□□□□ -1.23
CSNK1D-210ENST00000579308 OR5G3P0C626 314 aa7.39□□□□□ -1.23
CSNK1D-210ENST00000579308 LINC00869P0C866 280 aa7.39□□□□□ -1.23
CSNK1D-210ENST00000579308 PRB4P10163 310 aaPredicted RBP7.39□□□□□ -1.23
CSNK1D-210ENST00000579308 HTN1P15515 57 aa7.39□□□□□ -1.23
CSNK1D-210ENST00000579308 CDKN1BP46527 198 aa7.39□□□□□ -1.23
CSNK1D-210ENST00000579308 UBE2MP61081 183 aaKnown RBP7.39□□□□□ -1.23
CSNK1D-210ENST00000579308 KIR3DS1Q14943 382 aa7.39□□□□□ -1.23
CSNK1D-210ENST00000579308 TMEM14EPQ6UXP3 125 aa7.39□□□□□ -1.23
CSNK1D-210ENST00000579308 TMEM263Q8WUH6 116 aaKnown RBP7.39□□□□□ -1.23
CSNK1D-210ENST00000579308 RPUSD4Q96CM3 377 aaKnown RBP7.39□□□□□ -1.23
CSNK1D-210ENST00000579308 PSENENQ9NZ42 101 aa7.39□□□□□ -1.23
CSNK1D-210ENST00000579308 C9orf170A2RU37 121 aa7.38□□□□□ -1.23
CSNK1D-210ENST00000579308 SMCO3A2RU48 225 aa7.38□□□□□ -1.23
CSNK1D-210ENST00000579308 H7BYZ3 331 aa7.38□□□□□ -1.23
CSNK1D-210ENST00000579308 CXCL2P19875 107 aa7.38□□□□□ -1.23
CSNK1D-210ENST00000579308 M6PRP20645 277 aa7.38□□□□□ -1.23
CSNK1D-210ENST00000579308 HOXA5P20719 270 aa7.38□□□□□ -1.23
CSNK1D-210ENST00000579308 DLK1P80370 383 aa7.38□□□□□ -1.23
CSNK1D-210ENST00000579308 CLINT1Q14677 625 aa7.38□□□□□ -1.23
CSNK1D-210ENST00000579308 SPATA12Q7Z6I5 190 aa7.38□□□□□ -1.23
CSNK1D-210ENST00000579308 ZBTB8BQ8NAP8 495 aaPredicted RBP7.38□□□□□ -1.23
CSNK1D-210ENST00000579308 RXFP4Q8TDU9 374 aa7.38□□□□□ -1.23
CSNK1D-210ENST00000579308 C20orf144Q9BQM9 153 aa7.38□□□□□ -1.23
CSNK1D-210ENST00000579308 UPK3BQ9BT76 320 aa7.38□□□□□ -1.23
CSNK1D-210ENST00000579308 ARL6Q9H0F7 186 aa7.38□□□□□ -1.23
CSNK1D-210ENST00000579308 ARV1Q9H2C2 271 aa7.38□□□□□ -1.23
CSNK1D-210ENST00000579308 NPVFQ9HCQ7 196 aa7.38□□□□□ -1.23
CSNK1D-210ENST00000579308 ZNF331Q9NQX6 463 aaPredicted RBP7.38□□□□□ -1.23
CSNK1D-210ENST00000579308 PPP1R14DQ9NXH3 145 aa7.38□□□□□ -1.23
CSNK1D-210ENST00000579308 TRAV26-1A0A087WT03 109 aa7.37□□□□□ -1.23
CSNK1D-210ENST00000579308 PRAC2D3DTV9 90 aa7.37□□□□□ -1.23
CSNK1D-210ENST00000579308 ZNF701M0R085 212 aaPredicted RBP7.37□□□□□ -1.23
CSNK1D-210ENST00000579308 BTF3P20290 206 aaKnown RBP7.37□□□□□ -1.23
CSNK1D-210ENST00000579308 KRTAP10-2P60368 255 aa7.37□□□□□ -1.23
CSNK1D-210ENST00000579308 OR5I1Q13606 314 aa7.37□□□□□ -1.23
CSNK1D-210ENST00000579308 ESRGQ1W209 222 aa7.37□□□□□ -1.23
CSNK1D-210ENST00000579308 PXDC1Q5TGL8 231 aa7.37□□□□□ -1.23
CSNK1D-210ENST00000579308 S100A7AQ86SG5 101 aa7.37□□□□□ -1.23
CSNK1D-210ENST00000579308 CCDC190Q86UF4 302 aa7.37□□□□□ -1.23
CSNK1D-210ENST00000579308 OR10J6PQ8NGY7 276 aa7.37□□□□□ -1.23
CSNK1D-210ENST00000579308 LRRC20Q8TCA0 184 aa7.37□□□□□ -1.23
CSNK1D-210ENST00000579308 Q9H3A6 140 aa7.37□□□□□ -1.23
CSNK1D-210ENST00000579308 A0A1W2PPQ1 181 aa7.36□□□□□ -1.23
CSNK1D-210ENST00000579308 H3BNG1 76 aa7.36□□□□□ -1.23
CSNK1D-210ENST00000579308 SSSCA1O60232 199 aa7.36□□□□□ -1.23
CSNK1D-210ENST00000579308 METTL15P1P0C7V9 234 aa7.36□□□□□ -1.23
CSNK1D-210ENST00000579308 ANXA7P20073 488 aaKnown RBP7.36□□□□□ -1.23
CSNK1D-210ENST00000579308 TAS2R30P59541 319 aa7.36□□□□□ -1.23
CSNK1D-210ENST00000579308 RRAS2P62070 204 aaPredicted RBP7.36□□□□□ -1.23
CSNK1D-210ENST00000579308 SLC38A11Q08AI6 406 aa7.36□□□□□ -1.23
CSNK1D-210ENST00000579308 ARL16Q0P5N6 197 aa7.36□□□□□ -1.23
CSNK1D-210ENST00000579308 GFI1BQ5VTD9 330 aa7.36□□□□□ -1.23
CSNK1D-210ENST00000579308 TEPPQ6URK8 271 aa7.36□□□□□ -1.23
CSNK1D-210ENST00000579308 TMEM37Q8WXS4 190 aa7.36□□□□□ -1.23
CSNK1D-210ENST00000579308 GNPNAT1Q96EK6 184 aaPredicted RBP7.36□□□□□ -1.23
CSNK1D-210ENST00000579308 SAT2Q96F10 170 aaPredicted RBP7.36□□□□□ -1.23
CSNK1D-210ENST00000579308 SCRT2Q9NQ03 307 aa7.36□□□□□ -1.23
CSNK1D-210ENST00000579308 RNF24Q9Y225 148 aa7.36□□□□□ -1.23
CSNK1D-210ENST00000579308 VPS13BQ7Z7G8 4022 aa7.36□□□□□ -1.23
CSNK1D-210ENST00000579308 A0A0J9YY99 117 aa7.35□□□□□ -1.23
CSNK1D-210ENST00000579308 H3BQ15 152 aa7.35□□□□□ -1.23
CSNK1D-210ENST00000579308 SLC17A3O00476 420 aa7.35□□□□□ -1.23
CSNK1D-210ENST00000579308 NDUFB6O95139 128 aa7.35□□□□□ -1.23
CSNK1D-210ENST00000579308 SNRPCP09234 159 aaKnown RBP7.35□□□□□ -1.23
CSNK1D-210ENST00000579308 CT45A10P0DMU9 189 aa7.35□□□□□ -1.23
CSNK1D-210ENST00000579308 IGLC2P0DOY2 106 aa7.35□□□□□ -1.23
CSNK1D-210ENST00000579308 DAZ2Q13117 558 aaKnown RBP7.35□□□□□ -1.23
CSNK1D-210ENST00000579308 TTC32Q5I0X7 151 aa7.35□□□□□ -1.23
CSNK1D-210ENST00000579308 MORN5Q5VZ52 161 aa7.35□□□□□ -1.23
CSNK1D-210ENST00000579308 LCN15Q6UWW0 184 aa7.35□□□□□ -1.23
CSNK1D-210ENST00000579308 LINC00305Q7Z4B0 112 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms