RNA–Protein interactions for RNA: ENST00000579221.5

SLC6A4-205, Transcript of solute carrier family 6 member 4, humanhuman

TSL 1 (best)

Gene SLC6A4, Length 1,069 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4-205ENST00000579221 ACTR3CQ9C0K3 210 aaPredicted RBP11.55□□□□□ -0.56
SLC6A4-205ENST00000579221 NBEAL1Q6ZS30 2694 aa11.54□□□□□ -0.56
SLC6A4-205ENST00000579221 H3BQ15 152 aa11.54□□□□□ -0.56
SLC6A4-205ENST00000579221 OR7C2O60412 319 aa11.54□□□□□ -0.56
SLC6A4-205ENST00000579221 SNRPCP09234 159 aaKnown RBP11.54□□□□□ -0.56
SLC6A4-205ENST00000579221 FRMD6-AS1P0C7T7 363 aa11.54□□□□□ -0.56
SLC6A4-205ENST00000579221 PYYP10082 97 aa11.54□□□□□ -0.56
SLC6A4-205ENST00000579221 CDC34P49427 236 aaPredicted RBP11.54□□□□□ -0.56
SLC6A4-205ENST00000579221 RPP25LQ8N5L8 163 aaKnown RBP11.54□□□□□ -0.56
SLC6A4-205ENST00000579221 RNF141Q8WVD5 230 aa11.54□□□□□ -0.56
SLC6A4-205ENST00000579221 CITED4Q96RK1 184 aa11.54□□□□□ -0.56
SLC6A4-205ENST00000579221 SLC50A1Q9BRV3 221 aa11.54□□□□□ -0.56
SLC6A4-205ENST00000579221 RPRMQ9NS64 109 aa11.54□□□□□ -0.56
SLC6A4-205ENST00000579221 ZNF586Q9NXT0 402 aa11.54□□□□□ -0.56
SLC6A4-205ENST00000579221 CLEC5AQ9NY25 188 aa11.54□□□□□ -0.56
SLC6A4-205ENST00000579221 NOTCH1P46531 2555 aa11.53□□□□□ -0.56
SLC6A4-205ENST00000579221 LOC102724200A0A096LPH7 203 aaPredicted RBP11.53□□□□□ -0.56
SLC6A4-205ENST00000579221 RBMY1BA6NDE4 496 aaKnown RBP11.53□□□□□ -0.56
SLC6A4-205ENST00000579221 RBMY1EA6NEQ0 496 aaKnown RBP11.53□□□□□ -0.56
SLC6A4-205ENST00000579221 NBEAP1P0C6P0 100 aa11.53□□□□□ -0.56
SLC6A4-205ENST00000579221 RBMY1DP0C7P1 496 aaKnown RBP11.53□□□□□ -0.56
SLC6A4-205ENST00000579221 ZNF124Q15973 351 aa11.53□□□□□ -0.56
SLC6A4-205ENST00000579221 PQLC2Q6ZP29 291 aa11.53□□□□□ -0.56
SLC6A4-205ENST00000579221 SLC51BQ86UW2 128 aa11.53□□□□□ -0.56
SLC6A4-205ENST00000579221 STHQ8IWL8 128 aa11.53□□□□□ -0.56
SLC6A4-205ENST00000579221 C9orf62Q8N4C0 152 aa11.53□□□□□ -0.56
SLC6A4-205ENST00000579221 STOML3Q8TAV4 291 aa11.53□□□□□ -0.56
SLC6A4-205ENST00000579221 SAT2Q96F10 170 aaPredicted RBP11.53□□□□□ -0.56
SLC6A4-205ENST00000579221 TRBV19A0A075B6N1 114 aa11.52□□□□□ -0.57
SLC6A4-205ENST00000579221 TRAV8-2A0A0B4J237 113 aa11.52□□□□□ -0.57
SLC6A4-205ENST00000579221 H3BTX0 84 aa11.52□□□□□ -0.57
SLC6A4-205ENST00000579221 ZNF253O75346 499 aa11.52□□□□□ -0.57
SLC6A4-205ENST00000579221 PSG9Q00887 426 aa11.52□□□□□ -0.57
SLC6A4-205ENST00000579221 PSG3Q16557 428 aa11.52□□□□□ -0.57
SLC6A4-205ENST00000579221 IGFL4Q6B9Z1 124 aa11.52□□□□□ -0.57
SLC6A4-205ENST00000579221 EIF5AL1Q6IS14 154 aaKnown RBP11.52□□□□□ -0.57
SLC6A4-205ENST00000579221 LINC00322Q6ZN03 302 aaPredicted RBP11.52□□□□□ -0.57
SLC6A4-205ENST00000579221 BLNKQ8WV28 456 aa11.52□□□□□ -0.57
SLC6A4-205ENST00000579221 RAB24Q969Q5 203 aa11.52□□□□□ -0.57
SLC6A4-205ENST00000579221 C20orf173Q96LM9 149 aa11.52□□□□□ -0.57
SLC6A4-205ENST00000579221 B9D2Q9BPU9 175 aa11.52□□□□□ -0.57
SLC6A4-205ENST00000579221 ZNF331Q9NQX6 463 aaPredicted RBP11.52□□□□□ -0.57
SLC6A4-205ENST00000579221 FBN3Q75N90 2809 aa11.51□□□□□ -0.57
SLC6A4-205ENST00000579221 KNCNA6PVL3 124 aa11.51□□□□□ -0.57
SLC6A4-205ENST00000579221 UMAD1C9J7I0 102 aa11.51□□□□□ -0.57
SLC6A4-205ENST00000579221 OR10J4P0C629 311 aa11.51□□□□□ -0.57
SLC6A4-205ENST00000579221 PDE6HQ13956 83 aa11.51□□□□□ -0.57
SLC6A4-205ENST00000579221 ACTL10Q5JWF8 245 aa11.51□□□□□ -0.57
SLC6A4-205ENST00000579221 EBLN2Q6P2I7 272 aa11.51□□□□□ -0.57
SLC6A4-205ENST00000579221 FXYD5Q96DB9 178 aa11.51□□□□□ -0.57
SLC6A4-205ENST00000579221 HMGB3O15347 200 aaKnown RBP11.5□□□□□ -0.57
SLC6A4-205ENST00000579221 EIF3GO75821 320 aaKnown RBP eCLIP11.5□□□□□ -0.57
SLC6A4-205ENST00000579221 STAG3L2P0CL84 134 aa11.5□□□□□ -0.57
SLC6A4-205ENST00000579221 STAG3L3P0CL85 134 aa11.5□□□□□ -0.57
SLC6A4-205ENST00000579221 RPL35AP18077 110 aaKnown RBP11.5□□□□□ -0.57
SLC6A4-205ENST00000579221 UBE2L3P68036 154 aaKnown RBP11.5□□□□□ -0.57
SLC6A4-205ENST00000579221 FOXI2Q6ZQN5 318 aa11.5□□□□□ -0.57
SLC6A4-205ENST00000579221 RNF182Q8N6D2 247 aa11.5□□□□□ -0.57
SLC6A4-205ENST00000579221 ZNF738Q8NE65 137 aa11.5□□□□□ -0.57
SLC6A4-205ENST00000579221 ZNF503Q96F45 646 aa11.5□□□□□ -0.57
SLC6A4-205ENST00000579221 ASCL2Q99929 193 aa11.5□□□□□ -0.57
SLC6A4-205ENST00000579221 SAV1Q9H4B6 383 aaPredicted RBP11.5□□□□□ -0.57
SLC6A4-205ENST00000579221 CTXND1A0A1B0GTU2 59 aa11.49□□□□□ -0.57
SLC6A4-205ENST00000579221 SLC17A3O00476 420 aa11.49□□□□□ -0.57
SLC6A4-205ENST00000579221 CXorf1O96002 111 aa11.49□□□□□ -0.57
SLC6A4-205ENST00000579221 HLA-DMBP28068 263 aa11.49□□□□□ -0.57
SLC6A4-205ENST00000579221 NKX2-5P52952 324 aaPredicted RBP11.49□□□□□ -0.57
SLC6A4-205ENST00000579221 APOC4P55056 127 aa11.49□□□□□ -0.57
SLC6A4-205ENST00000579221 HAGHQ16775 308 aa11.49□□□□□ -0.57
SLC6A4-205ENST00000579221 SBSPONQ8IVN8 264 aa11.49□□□□□ -0.57
SLC6A4-205ENST00000579221 AAMDCQ9H7C9 122 aa11.49□□□□□ -0.57
SLC6A4-205ENST00000579221 PRELID1Q9Y255 219 aa11.49□□□□□ -0.57
SLC6A4-205ENST00000579221 KIR2DL5BA0A0G2JN68 375 aa11.48□□□□□ -0.57
SLC6A4-205ENST00000579221 KIR2DL5BA0A0G2JPC4 375 aa11.48□□□□□ -0.57
SLC6A4-205ENST00000579221 H3BMM0 161 aa11.48□□□□□ -0.57
SLC6A4-205ENST00000579221 UBE2CO00762 179 aa11.48□□□□□ -0.57
SLC6A4-205ENST00000579221 NDUFB4O95168 129 aa11.48□□□□□ -0.57
SLC6A4-205ENST00000579221 NHLRC4P0CG21 123 aaPredicted RBP11.48□□□□□ -0.57
SLC6A4-205ENST00000579221 ARL14EPLP0DKL9 152 aa11.48□□□□□ -0.57
SLC6A4-205ENST00000579221 HLA-DRB4P13762 266 aa11.48□□□□□ -0.57
SLC6A4-205ENST00000579221 DPPA3Q6W0C5 159 aa11.48□□□□□ -0.57
SLC6A4-205ENST00000579221 KIR2DL5AQ8N109 375 aa11.48□□□□□ -0.57
SLC6A4-205ENST00000579221 LYPD1Q8N2G4 141 aa11.48□□□□□ -0.57
SLC6A4-205ENST00000579221 KIR2DL5BQ8NHK3 375 aa11.48□□□□□ -0.57
SLC6A4-205ENST00000579221 TMED6Q8WW62 240 aa11.48□□□□□ -0.57
SLC6A4-205ENST00000579221 CSTL1Q9H114 145 aa11.48□□□□□ -0.57
SLC6A4-205ENST00000579221 HLA-DRB4X5D2U9 266 aa11.48□□□□□ -0.57
SLC6A4-205ENST00000579221 DNAH3Q8TD57 4116 aa11.47□□□□□ -0.57
SLC6A4-205ENST00000579221 A0A0J9YX75 114 aa11.47□□□□□ -0.57
SLC6A4-205ENST00000579221 DUSP14O95147 198 aaKnown RBP11.47□□□□□ -0.57
SLC6A4-205ENST00000579221 GCHFRP30047 84 aa11.47□□□□□ -0.57
SLC6A4-205ENST00000579221 RAB5CP51148 216 aa11.47□□□□□ -0.57
SLC6A4-205ENST00000579221 RANP62826 216 aaKnown RBP11.47□□□□□ -0.57
SLC6A4-205ENST00000579221 ZNF726P1Q15940 193 aa11.47□□□□□ -0.57
SLC6A4-205ENST00000579221 MORN3Q6PF18 240 aaPredicted RBP11.47□□□□□ -0.57
SLC6A4-205ENST00000579221 TRPT1Q86TN4 253 aaKnown RBP11.47□□□□□ -0.57
SLC6A4-205ENST00000579221 RPUSD4Q96CM3 377 aaKnown RBP11.47□□□□□ -0.57
SLC6A4-205ENST00000579221 MRPL53Q96EL3 112 aaKnown RBP11.47□□□□□ -0.57
SLC6A4-205ENST00000579221 TMEM167BQ9NRX6 74 aa11.47□□□□□ -0.57
SLC6A4-205ENST00000579221 PLA2G2EQ9NZK7 142 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms