RNA–Protein interactions for RNA: ENST00000578733.5

CDK5RAP3-210, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 578 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-210ENST00000578733 AAMDCQ9H7C9 122 aa8.46□□□□□ -1.06
CDK5RAP3-210ENST00000578733 TMEM167BQ9NRX6 74 aa8.46□□□□□ -1.06
CDK5RAP3-210ENST00000578733 BOLA1Q9Y3E2 137 aa8.46□□□□□ -1.06
CDK5RAP3-210ENST00000578733 NOTCH1P46531 2555 aa8.45□□□□□ -1.06
CDK5RAP3-210ENST00000578733 MAP1LC3B2A6NCE7 125 aa8.45□□□□□ -1.06
CDK5RAP3-210ENST00000578733 K7EQG2 157 aa8.45□□□□□ -1.06
CDK5RAP3-210ENST00000578733 MRPS12O15235 138 aaKnown RBP8.45□□□□□ -1.06
CDK5RAP3-210ENST00000578733 ZNF253O75346 499 aa8.45□□□□□ -1.06
CDK5RAP3-210ENST00000578733 IFNA7P01567 189 aa8.45□□□□□ -1.06
CDK5RAP3-210ENST00000578733 HBE1P02100 147 aa8.45□□□□□ -1.06
CDK5RAP3-210ENST00000578733 H2AFB1P0C5Y9 115 aa8.45□□□□□ -1.06
CDK5RAP3-210ENST00000578733 NBEAP1P0C6P0 100 aa8.45□□□□□ -1.06
CDK5RAP3-210ENST00000578733 IGLC2P0DOY2 106 aa8.45□□□□□ -1.06
CDK5RAP3-210ENST00000578733 PYYP10082 97 aa8.45□□□□□ -1.06
CDK5RAP3-210ENST00000578733 FAM74A1Q5RGS3 127 aa8.45□□□□□ -1.06
CDK5RAP3-210ENST00000578733 KPRPQ5T749 579 aaPredicted RBP8.45□□□□□ -1.06
CDK5RAP3-210ENST00000578733 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.45□□□□□ -1.06
CDK5RAP3-210ENST00000578733 IQCF2Q8IXL9 164 aa8.45□□□□□ -1.06
CDK5RAP3-210ENST00000578733 DCANP1Q8TF63 244 aa8.45□□□□□ -1.06
CDK5RAP3-210ENST00000578733 FAM167A-AS1Q96KT0 104 aa8.45□□□□□ -1.06
CDK5RAP3-210ENST00000578733 FAM110AQ9BQ89 295 aa8.45□□□□□ -1.06
CDK5RAP3-210ENST00000578733 MAP1LC3BQ9GZQ8 125 aa8.45□□□□□ -1.06
CDK5RAP3-210ENST00000578733 PLA2G2EQ9NZK7 142 aa8.45□□□□□ -1.06
CDK5RAP3-210ENST00000578733 SMAD5-AS1Q9Y6J3 95 aa8.45□□□□□ -1.06
CDK5RAP3-210ENST00000578733 HMGB3O15347 200 aaKnown RBP8.44□□□□□ -1.06
CDK5RAP3-210ENST00000578733 OR10J4P0C629 311 aa8.44□□□□□ -1.06
CDK5RAP3-210ENST00000578733 ARL14EPLP0DKL9 152 aa8.44□□□□□ -1.06
CDK5RAP3-210ENST00000578733 PPT1P50897 306 aa8.44□□□□□ -1.06
CDK5RAP3-210ENST00000578733 BLOC1S1P78537 153 aa8.44□□□□□ -1.06
CDK5RAP3-210ENST00000578733 ALKAL2Q6UX46 152 aa8.44□□□□□ -1.06
CDK5RAP3-210ENST00000578733 LYPD1Q8N2G4 141 aa8.44□□□□□ -1.06
CDK5RAP3-210ENST00000578733 SFT2D1Q8WV19 159 aa8.44□□□□□ -1.06
CDK5RAP3-210ENST00000578733 BLNKQ8WV28 456 aa8.44□□□□□ -1.06
CDK5RAP3-210ENST00000578733 DNAH3Q8TD57 4116 aa8.44□□□□□ -1.06
CDK5RAP3-210ENST00000578733 TRBV19A0A075B6N1 114 aa8.43□□□□□ -1.06
CDK5RAP3-210ENST00000578733 ZNF705EA8MWA4 302 aaPredicted RBP8.43□□□□□ -1.06
CDK5RAP3-210ENST00000578733 ZNF688P0C7X2 276 aa8.43□□□□□ -1.06
CDK5RAP3-210ENST00000578733 GCHFRP30047 84 aa8.43□□□□□ -1.06
CDK5RAP3-210ENST00000578733 KRTAP10-11P60412 298 aa8.43□□□□□ -1.06
CDK5RAP3-210ENST00000578733 PSMG4Q5JS54 123 aa8.43□□□□□ -1.06
CDK5RAP3-210ENST00000578733 MBD3L1Q8WWY6 194 aa8.43□□□□□ -1.06
CDK5RAP3-210ENST00000578733 FXYD5Q96DB9 178 aa8.43□□□□□ -1.06
CDK5RAP3-210ENST00000578733 LINC00052Q96N35 136 aa8.43□□□□□ -1.06
CDK5RAP3-210ENST00000578733 PRR25Q96S07 402 aa8.43□□□□□ -1.06
CDK5RAP3-210ENST00000578733 MAP6D1Q9H9H5 199 aa8.43□□□□□ -1.06
CDK5RAP3-210ENST00000578733 ZNF331Q9NQX6 463 aaPredicted RBP8.43□□□□□ -1.06
CDK5RAP3-210ENST00000578733 ZNF586Q9NXT0 402 aa8.43□□□□□ -1.06
CDK5RAP3-210ENST00000578733 UBQLN2Q9UHD9 624 aa8.43□□□□□ -1.06
CDK5RAP3-210ENST00000578733 PRELID1Q9Y255 219 aa8.43□□□□□ -1.06
CDK5RAP3-210ENST00000578733 H3BQ15 152 aa8.42□□□□□ -1.06
CDK5RAP3-210ENST00000578733 SOCS3O14543 225 aa8.42□□□□□ -1.06
CDK5RAP3-210ENST00000578733 IFNA1P01562 189 aa8.42□□□□□ -1.06
CDK5RAP3-210ENST00000578733 CSN1S1P47710 185 aa8.42□□□□□ -1.06
CDK5RAP3-210ENST00000578733 ZNF726P1Q15940 193 aa8.42□□□□□ -1.06
CDK5RAP3-210ENST00000578733 TEX261Q6UWH6 196 aa8.42□□□□□ -1.06
CDK5RAP3-210ENST00000578733 SAT2Q96F10 170 aaPredicted RBP8.42□□□□□ -1.06
CDK5RAP3-210ENST00000578733 NKX6-2Q9C056 277 aaPredicted RBP8.42□□□□□ -1.06
CDK5RAP3-210ENST00000578733 H3BTX0 84 aa8.41□□□□□ -1.06
CDK5RAP3-210ENST00000578733 EIF3GO75821 320 aaKnown RBP eCLIP8.41□□□□□ -1.06
CDK5RAP3-210ENST00000578733 SNRPCP09234 159 aaKnown RBP8.41□□□□□ -1.06
CDK5RAP3-210ENST00000578733 CD7P09564 240 aa8.41□□□□□ -1.06
CDK5RAP3-210ENST00000578733 FHITP49789 147 aa8.41□□□□□ -1.06
CDK5RAP3-210ENST00000578733 FGF8P55075 233 aaPredicted RBP8.41□□□□□ -1.06
CDK5RAP3-210ENST00000578733 DEFB131AP59861 70 aa8.41□□□□□ -1.06
CDK5RAP3-210ENST00000578733 PSG3Q16557 428 aa8.41□□□□□ -1.06
CDK5RAP3-210ENST00000578733 EBLN2Q6P2I7 272 aa8.41□□□□□ -1.06
CDK5RAP3-210ENST00000578733 SSX7Q7RTT5 188 aa8.41□□□□□ -1.06
CDK5RAP3-210ENST00000578733 ZNF738Q8NE65 137 aa8.41□□□□□ -1.06
CDK5RAP3-210ENST00000578733 CMTM2Q8TAZ6 248 aa8.41□□□□□ -1.06
CDK5RAP3-210ENST00000578733 SUN5Q8TC36 379 aa8.41□□□□□ -1.06
CDK5RAP3-210ENST00000578733 RXFP4Q8TDU9 374 aa8.41□□□□□ -1.06
CDK5RAP3-210ENST00000578733 MRPL53Q96EL3 112 aaKnown RBP8.41□□□□□ -1.06
CDK5RAP3-210ENST00000578733 ZNF503Q96F45 646 aa8.41□□□□□ -1.06
CDK5RAP3-210ENST00000578733 TUBA4BQ9H853 241 aa8.41□□□□□ -1.06
CDK5RAP3-210ENST00000578733 OTORQ9NRC9 128 aa8.41□□□□□ -1.06
CDK5RAP3-210ENST00000578733 ARL2-SNX15V9GYD0 113 aa8.41□□□□□ -1.06
CDK5RAP3-210ENST00000578733 TRAV1-1A0A0B4J248 108 aa8.4□□□□□ -1.06
CDK5RAP3-210ENST00000578733 A0A1W2PRE2 83 aa8.4□□□□□ -1.06
CDK5RAP3-210ENST00000578733 RAB14P61106 215 aa8.4□□□□□ -1.06
CDK5RAP3-210ENST00000578733 RANP62826 216 aaKnown RBP8.4□□□□□ -1.06
CDK5RAP3-210ENST00000578733 ODF3L2Q3SX64 289 aa8.4□□□□□ -1.06
CDK5RAP3-210ENST00000578733 FOXI2Q6ZQN5 318 aa8.4□□□□□ -1.06
CDK5RAP3-210ENST00000578733 STHQ8IWL8 128 aa8.4□□□□□ -1.06
CDK5RAP3-210ENST00000578733 ZNF680Q8NEM1 530 aa8.4□□□□□ -1.06
CDK5RAP3-210ENST00000578733 C17orf77Q96MU5 243 aa8.4□□□□□ -1.06
CDK5RAP3-210ENST00000578733 Q9H3A6 140 aa8.4□□□□□ -1.06
CDK5RAP3-210ENST00000578733 MANBALQ9NQG1 85 aa8.4□□□□□ -1.06
CDK5RAP3-210ENST00000578733 AURKAIP1Q9NWT8 199 aaPredicted RBP8.4□□□□□ -1.06
CDK5RAP3-210ENST00000578733 AGRNO00468 2067 aa8.4□□□□□ -1.06
CDK5RAP3-210ENST00000578733 KMT2CQ8NEZ4 4911 aaKnown RBP8.4□□□□□ -1.07
CDK5RAP3-210ENST00000578733 TRAV8-2A0A0B4J237 113 aa8.39□□□□□ -1.07
CDK5RAP3-210ENST00000578733 A0A1B0GV50 99 aa8.39□□□□□ -1.07
CDK5RAP3-210ENST00000578733 SLC17A3O00476 420 aa8.39□□□□□ -1.07
CDK5RAP3-210ENST00000578733 DUSP14O95147 198 aaKnown RBP8.39□□□□□ -1.07
CDK5RAP3-210ENST00000578733 TAGLN2P37802 199 aaKnown RBP8.39□□□□□ -1.07
CDK5RAP3-210ENST00000578733 PMS2P11Q13670 270 aa8.39□□□□□ -1.07
CDK5RAP3-210ENST00000578733 ICAM4Q14773 271 aa8.39□□□□□ -1.07
CDK5RAP3-210ENST00000578733 ZNF767PQ75MW2 155 aa8.39□□□□□ -1.07
CDK5RAP3-210ENST00000578733 FAM24BQ8N5W8 94 aa8.39□□□□□ -1.07
CDK5RAP3-210ENST00000578733 RNF182Q8N6D2 247 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 82.3 ms