RNA–Protein interactions for RNA: ENST00000577001.1

PRPF8-216, Transcript of pre-mRNA processing factor 8, human

TSL 5

Gene PRPF8, Length 3,274 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRPF8-216	ENST00000577001	ZNF672	Q499Z4	452 aa	Predicted RBP	11.71	□□□□□ -0.53
PRPF8-216	ENST00000577001	OR10J3	Q5JRS4	329 aa		11.71	□□□□□ -0.53
PRPF8-216	ENST00000577001	AMN1	Q8IY45	258 aa		11.71	□□□□□ -0.53
PRPF8-216	ENST00000577001	TTTY13	Q9BZ97	58 aa		11.71	□□□□□ -0.53
PRPF8-216	ENST00000577001		A0A1B0GWJ7	208 aa		11.71	□□□□□ -0.53
PRPF8-216	ENST00000577001		A8MWL6	223 aa		11.71	□□□□□ -0.53
PRPF8-216	ENST00000577001	IGLC1	P0CG04	106 aa		11.71	□□□□□ -0.53
PRPF8-216	ENST00000577001	DYNAP	Q8N1N2	210 aa		11.71	□□□□□ -0.53
PRPF8-216	ENST00000577001	RNF182	Q8N6D2	247 aa		11.71	□□□□□ -0.53
PRPF8-216	ENST00000577001	EVI2A	P22794	236 aa		11.71	□□□□□ -0.54
PRPF8-216	ENST00000577001	CTRL	P40313	264 aa		11.71	□□□□□ -0.54
PRPF8-216	ENST00000577001	MEF2C	Q06413	473 aa	Predicted RBP	11.71	□□□□□ -0.54
PRPF8-216	ENST00000577001	ERCC8	Q13216	396 aa		11.71	□□□□□ -0.54
PRPF8-216	ENST00000577001	F11R	Q9Y624	299 aa	Known RBP	11.71	□□□□□ -0.54
PRPF8-216	ENST00000577001	VSTM5	A8MXK1	200 aa		11.7	□□□□□ -0.54
PRPF8-216	ENST00000577001	TEX22	C9J3V5	150 aa		11.7	□□□□□ -0.54
PRPF8-216	ENST00000577001	IFI27	P40305	119 aa	Predicted RBP	11.7	□□□□□ -0.54
PRPF8-216	ENST00000577001	C5orf17	Q8NAS9	161 aa		11.7	□□□□□ -0.54
PRPF8-216	ENST00000577001	ZNF596	Q8TC21	504 aa		11.7	□□□□□ -0.54
PRPF8-216	ENST00000577001	ABCA12	Q86UK0	2595 aa		11.7	□□□□□ -0.54
PRPF8-216	ENST00000577001	C2orf70	A6NJV1	201 aa		11.7	□□□□□ -0.54
PRPF8-216	ENST00000577001	LBH	Q53QV2	105 aa	Predicted RBP	11.7	□□□□□ -0.54
PRPF8-216	ENST00000577001	FAM120AOS	Q5T036	256 aa		11.7	□□□□□ -0.54
PRPF8-216	ENST00000577001	RAB37	Q96AX2	223 aa		11.7	□□□□□ -0.54
PRPF8-216	ENST00000577001	TMEM70	Q9BUB7	260 aa		11.7	□□□□□ -0.54
PRPF8-216	ENST00000577001	NDP	Q00604	133 aa		11.7	□□□□□ -0.54
PRPF8-216	ENST00000577001	WFDC12	Q8WWY7	111 aa		11.7	□□□□□ -0.54
PRPF8-216	ENST00000577001	C20orf202	A1L168	122 aa		11.69	□□□□□ -0.54
PRPF8-216	ENST00000577001	LINC00614	P0C842	121 aa		11.69	□□□□□ -0.54
PRPF8-216	ENST00000577001	FOSL1	P15407	271 aa		11.69	□□□□□ -0.54
PRPF8-216	ENST00000577001	DLX6	P56179	175 aa		11.69	□□□□□ -0.54
PRPF8-216	ENST00000577001	RNASE8	Q8TDE3	154 aa	Known RBP	11.69	□□□□□ -0.54
PRPF8-216	ENST00000577001	CCDC168	Q8NDH2	2452 aa		11.69	□□□□□ -0.54
PRPF8-216	ENST00000577001	TRBV9	A0A0B4J1U6	114 aa		11.69	□□□□□ -0.54
PRPF8-216	ENST00000577001	ITGB1BP1	O14713	200 aa		11.69	□□□□□ -0.54
PRPF8-216	ENST00000577001	GATA1	P15976	413 aa	Predicted RBP	11.69	□□□□□ -0.54
PRPF8-216	ENST00000577001		Q86TA4	180 aa		11.69	□□□□□ -0.54
PRPF8-216	ENST00000577001	C8orf46	Q8TAG6	207 aa		11.69	□□□□□ -0.54
PRPF8-216	ENST00000577001	LY96	Q9Y6Y9	160 aa		11.69	□□□□□ -0.54
PRPF8-216	ENST00000577001	MC5R	P33032	325 aa		11.68	□□□□□ -0.54
PRPF8-216	ENST00000577001	CRIP1	P50238	77 aa		11.68	□□□□□ -0.54
PRPF8-216	ENST00000577001	ETFRF1	Q6IPR1	90 aa		11.68	□□□□□ -0.54
PRPF8-216	ENST00000577001	FAM169B	Q8N8A8	192 aa		11.68	□□□□□ -0.54
PRPF8-216	ENST00000577001	NUP37	Q8NFH4	326 aa		11.68	□□□□□ -0.54
PRPF8-216	ENST00000577001	RBM14-RBM4	A0A0A0MSL8	147 aa	Known RBP	11.68	□□□□□ -0.54
PRPF8-216	ENST00000577001	LINC01548	A6NM66	108 aa		11.68	□□□□□ -0.54
PRPF8-216	ENST00000577001	ORM1	P02763	201 aa		11.68	□□□□□ -0.54
PRPF8-216	ENST00000577001	TRAV9-2	A0A087WT02	112 aa		11.68	□□□□□ -0.54
PRPF8-216	ENST00000577001	ZNF785	A8K8V0	405 aa		11.68	□□□□□ -0.54
PRPF8-216	ENST00000577001	APOBEC3A	P31941	199 aa	Predicted RBP	11.68	□□□□□ -0.54
PRPF8-216	ENST00000577001	OR4F17	Q8NGA8	305 aa		11.68	□□□□□ -0.54
PRPF8-216	ENST00000577001	C7orf69	Q9H7B7	122 aa		11.68	□□□□□ -0.54
PRPF8-216	ENST00000577001	PSG8	Q9UQ74	426 aa		11.68	□□□□□ -0.54
PRPF8-216	ENST00000577001		D6R8Y8	96 aa		11.67	□□□□□ -0.54
PRPF8-216	ENST00000577001	HLA-DRB1	P01911	266 aa		11.67	□□□□□ -0.54
PRPF8-216	ENST00000577001	LYZL1	Q6UWQ5	148 aa		11.67	□□□□□ -0.54
PRPF8-216	ENST00000577001	ASCL5	Q7RTU5	278 aa		11.67	□□□□□ -0.54
PRPF8-216	ENST00000577001	NGB	Q9NPG2	151 aa		11.67	□□□□□ -0.54
PRPF8-216	ENST00000577001	OR5AL1	P0C617	328 aa		11.67	□□□□□ -0.54
PRPF8-216	ENST00000577001	LGALS7	P47929	136 aa		11.67	□□□□□ -0.54
PRPF8-216	ENST00000577001	IGFL3	Q6UXB1	125 aa		11.67	□□□□□ -0.54
PRPF8-216	ENST00000577001	RBPMS2	Q6ZRY4	209 aa	Known RBP	11.67	□□□□□ -0.54
PRPF8-216	ENST00000577001	TMEM219	Q86XT9	240 aa		11.67	□□□□□ -0.54
PRPF8-216	ENST00000577001	RNF125	Q96EQ8	232 aa		11.67	□□□□□ -0.54
PRPF8-216	ENST00000577001	VGLL1	Q99990	258 aa		11.67	□□□□□ -0.54
PRPF8-216	ENST00000577001		K7EIM0	57 aa		11.66	□□□□□ -0.54
PRPF8-216	ENST00000577001	SYS1-DBNDD2	H3BUS1	97 aa		11.66	□□□□□ -0.54
PRPF8-216	ENST00000577001	ESD	P10768	282 aa		11.66	□□□□□ -0.54
PRPF8-216	ENST00000577001	GPR183	P32249	361 aa		11.66	□□□□□ -0.54
PRPF8-216	ENST00000577001	CHRDL1	Q9BU40	450 aa		11.66	□□□□□ -0.54
PRPF8-216	ENST00000577001	C19orf24	Q9BVV8	132 aa		11.66	□□□□□ -0.54
PRPF8-216	ENST00000577001		G3V318	75 aa		11.66	□□□□□ -0.54
PRPF8-216	ENST00000577001	LCNL1	Q6ZST4	164 aa		11.66	□□□□□ -0.54
PRPF8-216	ENST00000577001	FA2H	Q7L5A8	372 aa		11.66	□□□□□ -0.54
PRPF8-216	ENST00000577001	THAP8	Q8NA92	274 aa		11.66	□□□□□ -0.54
PRPF8-216	ENST00000577001	SOX21	Q9Y651	276 aa	Predicted RBP	11.66	□□□□□ -0.54
PRPF8-216	ENST00000577001	NACA	E9PAV3	2078 aa		11.65	□□□□□ -0.54
PRPF8-216	ENST00000577001	TWIST1	Q15672	202 aa		11.65	□□□□□ -0.54
PRPF8-216	ENST00000577001	TRAV9-1	A0A075B6T8	112 aa		11.65	□□□□□ -0.54
PRPF8-216	ENST00000577001	IGLV1-47	P01700	117 aa		11.65	□□□□□ -0.54
PRPF8-216	ENST00000577001	MYCNOS	P40205	109 aa		11.65	□□□□□ -0.54
PRPF8-216	ENST00000577001	NHLH1	Q02575	133 aa		11.65	□□□□□ -0.54
PRPF8-216	ENST00000577001	LY6D	Q14210	128 aa		11.65	□□□□□ -0.54
PRPF8-216	ENST00000577001	BPIFA4P	Q86YQ2	179 aa		11.65	□□□□□ -0.54
PRPF8-216	ENST00000577001	KLHDC1	Q8N7A1	406 aa		11.65	□□□□□ -0.54
PRPF8-216	ENST00000577001	RAX	Q9Y2V3	346 aa		11.65	□□□□□ -0.54
PRPF8-216	ENST00000577001	ITPR1	Q14643	2758 aa		11.64	□□□□□ -0.55
PRPF8-216	ENST00000577001	PRAC2	D3DTV9	90 aa		11.64	□□□□□ -0.55
PRPF8-216	ENST00000577001		I3L2K1	104 aa		11.64	□□□□□ -0.55
PRPF8-216	ENST00000577001	TOMM40	O96008	361 aa		11.64	□□□□□ -0.55
PRPF8-216	ENST00000577001		M0QZK8	103 aa		11.64	□□□□□ -0.55
PRPF8-216	ENST00000577001	LTA	P01374	205 aa		11.64	□□□□□ -0.55
PRPF8-216	ENST00000577001	IGLV2-11	P01706	119 aa		11.64	□□□□□ -0.55
PRPF8-216	ENST00000577001	NMU	P48645	174 aa		11.64	□□□□□ -0.55
PRPF8-216	ENST00000577001	REL	Q04864	619 aa	Predicted RBP	11.64	□□□□□ -0.55
PRPF8-216	ENST00000577001	ZNF491	Q8N8L2	437 aa		11.64	□□□□□ -0.55
PRPF8-216	ENST00000577001	OR4C5	Q8NGB2	326 aa		11.64	□□□□□ -0.55
PRPF8-216	ENST00000577001	TRGV9	Q99603	122 aa		11.64	□□□□□ -0.55
PRPF8-216	ENST00000577001	MLST8	Q9BVC4	326 aa		11.64	□□□□□ -0.55
PRPF8-216	ENST00000577001	LRRK2	Q5S007	2527 aa		11.64	□□□□□ -0.55

Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms