RNA–Protein interactions for RNA: ENST00000575711.1

RPAIN-217, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 732 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-217ENST00000575711 OR7C2O60412 319 aa10.39□□□□□ -0.75
RPAIN-217ENST00000575711 CDC34P49427 236 aaPredicted RBP10.39□□□□□ -0.75
RPAIN-217ENST00000575711 GUK1Q16774 197 aa10.39□□□□□ -0.75
RPAIN-217ENST00000575711 APRG1Q8IVJ8 170 aa10.39□□□□□ -0.75
RPAIN-217ENST00000575711 BAP18Q8IXM2 172 aa10.39□□□□□ -0.75
RPAIN-217ENST00000575711 STOML3Q8TAV4 291 aa10.39□□□□□ -0.75
RPAIN-217ENST00000575711 FAM167A-AS1Q96KT0 104 aa10.39□□□□□ -0.75
RPAIN-217ENST00000575711 C17orf77Q96MU5 243 aa10.39□□□□□ -0.75
RPAIN-217ENST00000575711 LINC00052Q96N35 136 aa10.39□□□□□ -0.75
RPAIN-217ENST00000575711 PAXXQ9BUH6 204 aa10.39□□□□□ -0.75
RPAIN-217ENST00000575711 OR51M1Q9H341 326 aa10.39□□□□□ -0.75
RPAIN-217ENST00000575711 FBN3Q75N90 2809 aa10.39□□□□□ -0.75
RPAIN-217ENST00000575711 H3BQ15 152 aa10.38□□□□□ -0.75
RPAIN-217ENST00000575711 SNRPCP09234 159 aaKnown RBP10.38□□□□□ -0.75
RPAIN-217ENST00000575711 SEC11BP0C7V7 166 aa10.38□□□□□ -0.75
RPAIN-217ENST00000575711 PYYP10082 97 aa10.38□□□□□ -0.75
RPAIN-217ENST00000575711 HIST1H1EP10412 219 aaKnown RBP10.38□□□□□ -0.75
RPAIN-217ENST00000575711 SLC51BQ86UW2 128 aa10.38□□□□□ -0.75
RPAIN-217ENST00000575711 RPP25LQ8N5L8 163 aaKnown RBP10.38□□□□□ -0.75
RPAIN-217ENST00000575711 SLC50A1Q9BRV3 221 aa10.38□□□□□ -0.75
RPAIN-217ENST00000575711 ACTR3CQ9C0K3 210 aaPredicted RBP10.38□□□□□ -0.75
RPAIN-217ENST00000575711 RPRMQ9NS64 109 aa10.38□□□□□ -0.75
RPAIN-217ENST00000575711 H3BTX0 84 aa10.37□□□□□ -0.75
RPAIN-217ENST00000575711 FRMD6-AS1P0C7T7 363 aa10.37□□□□□ -0.75
RPAIN-217ENST00000575711 NKX2-5P52952 324 aaPredicted RBP10.37□□□□□ -0.75
RPAIN-217ENST00000575711 ZNF124Q15973 351 aa10.37□□□□□ -0.75
RPAIN-217ENST00000575711 EIF5AL1Q6IS14 154 aaKnown RBP10.37□□□□□ -0.75
RPAIN-217ENST00000575711 PQLC2Q6ZP29 291 aa10.37□□□□□ -0.75
RPAIN-217ENST00000575711 RNF141Q8WVD5 230 aa10.37□□□□□ -0.75
RPAIN-217ENST00000575711 CITED4Q96RK1 184 aa10.37□□□□□ -0.75
RPAIN-217ENST00000575711 ZNF586Q9NXT0 402 aa10.37□□□□□ -0.75
RPAIN-217ENST00000575711 TRBV19A0A075B6N1 114 aa10.36□□□□□ -0.75
RPAIN-217ENST00000575711 TRAV8-2A0A0B4J237 113 aa10.36□□□□□ -0.75
RPAIN-217ENST00000575711 UMAD1C9J7I0 102 aa10.36□□□□□ -0.75
RPAIN-217ENST00000575711 HMGB3O15347 200 aaKnown RBP10.36□□□□□ -0.75
RPAIN-217ENST00000575711 ZNF253O75346 499 aa10.36□□□□□ -0.75
RPAIN-217ENST00000575711 EIF3GO75821 320 aaKnown RBP eCLIP10.36□□□□□ -0.75
RPAIN-217ENST00000575711 OR10J4P0C629 311 aa10.36□□□□□ -0.75
RPAIN-217ENST00000575711 UBE2L3P68036 154 aaKnown RBP10.36□□□□□ -0.75
RPAIN-217ENST00000575711 PDE6HQ13956 83 aa10.36□□□□□ -0.75
RPAIN-217ENST00000575711 IGFL4Q6B9Z1 124 aa10.36□□□□□ -0.75
RPAIN-217ENST00000575711 STHQ8IWL8 128 aa10.36□□□□□ -0.75
RPAIN-217ENST00000575711 BLNKQ8WV28 456 aa10.36□□□□□ -0.75
RPAIN-217ENST00000575711 RAB24Q969Q5 203 aa10.36□□□□□ -0.75
RPAIN-217ENST00000575711 SAT2Q96F10 170 aaPredicted RBP10.36□□□□□ -0.75
RPAIN-217ENST00000575711 ZNF331Q9NQX6 463 aaPredicted RBP10.36□□□□□ -0.75
RPAIN-217ENST00000575711 LOC102724200A0A096LPH7 203 aaPredicted RBP10.35□□□□□ -0.75
RPAIN-217ENST00000575711 RBMY1BA6NDE4 496 aaKnown RBP10.35□□□□□ -0.75
RPAIN-217ENST00000575711 RBMY1EA6NEQ0 496 aaKnown RBP10.35□□□□□ -0.75
RPAIN-217ENST00000575711 SLC17A3O00476 420 aa10.35□□□□□ -0.75
RPAIN-217ENST00000575711 NBEAP1P0C6P0 100 aa10.35□□□□□ -0.75
RPAIN-217ENST00000575711 RBMY1DP0C7P1 496 aaKnown RBP10.35□□□□□ -0.75
RPAIN-217ENST00000575711 STAG3L2P0CL84 134 aa10.35□□□□□ -0.75
RPAIN-217ENST00000575711 STAG3L3P0CL85 134 aa10.35□□□□□ -0.75
RPAIN-217ENST00000575711 PSG9Q00887 426 aa10.35□□□□□ -0.75
RPAIN-217ENST00000575711 ACTL10Q5JWF8 245 aa10.35□□□□□ -0.75
RPAIN-217ENST00000575711 RNF182Q8N6D2 247 aa10.35□□□□□ -0.75
RPAIN-217ENST00000575711 TMED6Q8WW62 240 aa10.35□□□□□ -0.75
RPAIN-217ENST00000575711 FXYD5Q96DB9 178 aa10.35□□□□□ -0.75
RPAIN-217ENST00000575711 ZNF503Q96F45 646 aa10.35□□□□□ -0.75
RPAIN-217ENST00000575711 C20orf173Q96LM9 149 aa10.35□□□□□ -0.75
RPAIN-217ENST00000575711 CLEC5AQ9NY25 188 aa10.35□□□□□ -0.75
RPAIN-217ENST00000575711 MEGF8Q7Z7M0 2845 aa10.35□□□□□ -0.75
RPAIN-217ENST00000575711 CTXND1A0A1B0GTU2 59 aa10.34□□□□□ -0.75
RPAIN-217ENST00000575711 KNCNA6PVL3 124 aa10.34□□□□□ -0.75
RPAIN-217ENST00000575711 ARL14EPLP0DKL9 152 aa10.34□□□□□ -0.75
RPAIN-217ENST00000575711 RPL35AP18077 110 aaKnown RBP10.34□□□□□ -0.75
RPAIN-217ENST00000575711 PSG3Q16557 428 aa10.34□□□□□ -0.75
RPAIN-217ENST00000575711 LINC00322Q6ZN03 302 aaPredicted RBP10.34□□□□□ -0.75
RPAIN-217ENST00000575711 FOXI2Q6ZQN5 318 aa10.34□□□□□ -0.75
RPAIN-217ENST00000575711 ZNF738Q8NE65 137 aa10.34□□□□□ -0.75
RPAIN-217ENST00000575711 B9D2Q9BPU9 175 aa10.34□□□□□ -0.75
RPAIN-217ENST00000575711 AAMDCQ9H7C9 122 aa10.34□□□□□ -0.75
RPAIN-217ENST00000575711 NDUFB4O95168 129 aa10.33□□□□□ -0.76
RPAIN-217ENST00000575711 CXorf1O96002 111 aa10.33□□□□□ -0.76
RPAIN-217ENST00000575711 HLA-DMBP28068 263 aa10.33□□□□□ -0.76
RPAIN-217ENST00000575711 ZNF726P1Q15940 193 aa10.33□□□□□ -0.76
RPAIN-217ENST00000575711 EBLN2Q6P2I7 272 aa10.33□□□□□ -0.76
RPAIN-217ENST00000575711 DPPA3Q6W0C5 159 aa10.33□□□□□ -0.76
RPAIN-217ENST00000575711 SAV1Q9H4B6 383 aaPredicted RBP10.33□□□□□ -0.76
RPAIN-217ENST00000575711 HLA-DRB4P13762 266 aa10.32□□□□□ -0.76
RPAIN-217ENST00000575711 GCHFRP30047 84 aa10.32□□□□□ -0.76
RPAIN-217ENST00000575711 APOC4P55056 127 aa10.32□□□□□ -0.76
RPAIN-217ENST00000575711 DEFB1P60022 68 aa10.32□□□□□ -0.76
RPAIN-217ENST00000575711 SSX7Q7RTT5 188 aa10.32□□□□□ -0.76
RPAIN-217ENST00000575711 IQCF2Q8IXL9 164 aa10.32□□□□□ -0.76
RPAIN-217ENST00000575711 FAM213BQ8TBF2 198 aa10.32□□□□□ -0.76
RPAIN-217ENST00000575711 MRPL53Q96EL3 112 aaKnown RBP10.32□□□□□ -0.76
RPAIN-217ENST00000575711 PHYHIPLQ96FC7 376 aa10.32□□□□□ -0.76
RPAIN-217ENST00000575711 PRELID1Q9Y255 219 aa10.32□□□□□ -0.76
RPAIN-217ENST00000575711 HLA-DRB4X5D2U9 266 aa10.32□□□□□ -0.76
RPAIN-217ENST00000575711 KIR2DL5BA0A0G2JN68 375 aa10.31□□□□□ -0.76
RPAIN-217ENST00000575711 KIR2DL5BA0A0G2JPC4 375 aa10.31□□□□□ -0.76
RPAIN-217ENST00000575711 MAP1LC3B2A6NCE7 125 aa10.31□□□□□ -0.76
RPAIN-217ENST00000575711 F6UB75 175 aa10.31□□□□□ -0.76
RPAIN-217ENST00000575711 H3BMM0 161 aa10.31□□□□□ -0.76
RPAIN-217ENST00000575711 FHITP49789 147 aa10.31□□□□□ -0.76
RPAIN-217ENST00000575711 RAB5CP51148 216 aa10.31□□□□□ -0.76
RPAIN-217ENST00000575711 RANP62826 216 aaKnown RBP10.31□□□□□ -0.76
RPAIN-217ENST00000575711 HAGHQ16775 308 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms