RNA–Protein interactions for RNA: ENST00000573852.5

SCARF1-206, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 2,698 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-206ENST00000573852 S4R3C0 116 aa15.03■□□□□ -0
SCARF1-206ENST00000573852 MRPS12O15235 138 aaKnown RBP15.02■□□□□ -0
SCARF1-206ENST00000573852 APOBEC3AP31941 199 aaPredicted RBP15.02■□□□□ -0
SCARF1-206ENST00000573852 COTL1Q14019 142 aa15.02■□□□□ -0
SCARF1-206ENST00000573852 IGFBPL1Q8WX77 278 aa15.02■□□□□ -0
SCARF1-206ENST00000573852 ZNF414Q96IQ9 312 aa15.02■□□□□ -0
SCARF1-206ENST00000573852 MUC21A0A0G2JKD1 596 aa15.02□□□□□ -0.01
SCARF1-206ENST00000573852 MUC21A0A140T8X8 626 aa15.02□□□□□ -0.01
SCARF1-206ENST00000573852 TIMM23O14925 209 aa15.02□□□□□ -0.01
SCARF1-206ENST00000573852 IL4P05112 153 aa15.02□□□□□ -0.01
SCARF1-206ENST00000573852 MUC21Q5SSG8 566 aa15.02□□□□□ -0.01
SCARF1-206ENST00000573852 RNF125Q96EQ8 232 aa15.02□□□□□ -0.01
SCARF1-206ENST00000573852 C8orf49Q96NF6 230 aa15.02□□□□□ -0.01
SCARF1-206ENST00000573852 FCGR2BP31994 310 aaPredicted RBP15.01□□□□□ -0.01
SCARF1-206ENST00000573852 VAMP3Q15836 100 aa15.01□□□□□ -0.01
SCARF1-206ENST00000573852 KLF17Q5JT82 389 aaPredicted RBP15.01□□□□□ -0.01
SCARF1-206ENST00000573852 ZNF747Q9BV97 191 aa15.01□□□□□ -0.01
SCARF1-206ENST00000573852 ZNF318Q5VUA4 2279 aa15.01□□□□□ -0.01
SCARF1-206ENST00000573852 K7EP13 123 aa15.01□□□□□ -0.01
SCARF1-206ENST00000573852 NCR2O95944 276 aa15.01□□□□□ -0.01
SCARF1-206ENST00000573852 FAM106CPP0CH98 169 aa15.01□□□□□ -0.01
SCARF1-206ENST00000573852 FAM106AQ4KMX7 169 aa15.01□□□□□ -0.01
SCARF1-206ENST00000573852 MS4A6AQ9H2W1 248 aa15.01□□□□□ -0.01
SCARF1-206ENST00000573852 RNF24Q9Y225 148 aa15.01□□□□□ -0.01
SCARF1-206ENST00000573852 DCHS2Q6V1P9 2916 aa15□□□□□ -0.01
SCARF1-206ENST00000573852 K7EQM0 130 aa15□□□□□ -0.01
SCARF1-206ENST00000573852 FOXE3Q13461 319 aa15□□□□□ -0.01
SCARF1-206ENST00000573852 LYPD1Q8N2G4 141 aa15□□□□□ -0.01
SCARF1-206ENST00000573852 LRBAP50851 2863 aa15□□□□□ -0.01
SCARF1-206ENST00000573852 RIF1Q5UIP0 2472 aaKnown RBP15□□□□□ -0.01
SCARF1-206ENST00000573852 B9A039 149 aa15□□□□□ -0.01
SCARF1-206ENST00000573852 SAPCD1Q5SSQ6 148 aa15□□□□□ -0.01
SCARF1-206ENST00000573852 OR4C5Q8NGB2 326 aa15□□□□□ -0.01
SCARF1-206ENST00000573852 PRSS3P2Q8NHM4 247 aa15□□□□□ -0.01
SCARF1-206ENST00000573852 RNF5Q99942 180 aa15□□□□□ -0.01
SCARF1-206ENST00000573852 SRSF8Q9BRL6 282 aaKnown RBP15□□□□□ -0.01
SCARF1-206ENST00000573852 A0A087X0K7 114 aa15□□□□□ -0.01
SCARF1-206ENST00000573852 RNF151Q2KHN1 245 aa15□□□□□ -0.01
SCARF1-206ENST00000573852 CSMD1Q96PZ7 3565 aa14.99□□□□□ -0.01
SCARF1-206ENST00000573852 PRR30Q53SZ7 412 aaPredicted RBP14.99□□□□□ -0.01
SCARF1-206ENST00000573852 FA2HQ7L5A8 372 aa14.99□□□□□ -0.01
SCARF1-206ENST00000573852 DEFB125Q8N687 156 aa14.99□□□□□ -0.01
SCARF1-206ENST00000573852 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP14.99□□□□□ -0.01
SCARF1-206ENST00000573852 A0A1B0GW15 77 aa14.99□□□□□ -0.01
SCARF1-206ENST00000573852 IFI27P40305 119 aaPredicted RBP14.99□□□□□ -0.01
SCARF1-206ENST00000573852 ARF6P62330 175 aa14.99□□□□□ -0.01
SCARF1-206ENST00000573852 LOXL1Q08397 574 aaPredicted RBP14.99□□□□□ -0.01
SCARF1-206ENST00000573852 C12orf54Q6X4T0 127 aa14.99□□□□□ -0.01
SCARF1-206ENST00000573852 ONECUT1Q9UBC0 465 aa14.99□□□□□ -0.01
SCARF1-206ENST00000573852 TRAV30A0A087WSZ9 112 aa14.98□□□□□ -0.01
SCARF1-206ENST00000573852 WI2-2373I1.2A0A1W2PRP0 233 aa14.98□□□□□ -0.01
SCARF1-206ENST00000573852 OR2T8A6NH00 312 aa14.98□□□□□ -0.01
SCARF1-206ENST00000573852 ARHGAP32A7KAX9 2087 aa14.98□□□□□ -0.01
SCARF1-206ENST00000573852 TMSB15BA0A087X1C1 80 aa14.98□□□□□ -0.01
SCARF1-206ENST00000573852 OR10AG1Q8NH19 301 aa14.98□□□□□ -0.01
SCARF1-206ENST00000573852 A0A096LNJ9 63 aa14.97□□□□□ -0.01
SCARF1-206ENST00000573852 HILPDAQ9Y5L2 63 aa14.97□□□□□ -0.01
SCARF1-206ENST00000573852 SERTM2A0A1B0GWG4 89 aa14.97□□□□□ -0.01
SCARF1-206ENST00000573852 TMEM213A2RRL7 107 aa14.97□□□□□ -0.01
SCARF1-206ENST00000573852 CBY3A6NI87 242 aa14.97□□□□□ -0.01
SCARF1-206ENST00000573852 CD3EP07766 207 aa14.97□□□□□ -0.01
SCARF1-206ENST00000573852 CSN1S1P47710 185 aa14.97□□□□□ -0.01
SCARF1-206ENST00000573852 RHOGP84095 191 aa14.97□□□□□ -0.01
SCARF1-206ENST00000573852 LYZL1Q6UWQ5 148 aa14.97□□□□□ -0.01
SCARF1-206ENST00000573852 ZNF493Q6ZR52 646 aa14.97□□□□□ -0.01
SCARF1-206ENST00000573852 LOC389332A0A1B0GUA5 103 aa14.96□□□□□ -0.01
SCARF1-206ENST00000573852 HIST1H1AQ02539 215 aaPredicted RBP14.96□□□□□ -0.01
SCARF1-206ENST00000573852 Q6AWC8 147 aa14.96□□□□□ -0.01
SCARF1-206ENST00000573852 TMEM190Q8WZ59 177 aa14.96□□□□□ -0.01
SCARF1-206ENST00000573852 D6R8Y8 96 aa14.96□□□□□ -0.02
SCARF1-206ENST00000573852 NBR2O15453 112 aa14.96□□□□□ -0.02
SCARF1-206ENST00000573852 SNAI2O43623 268 aa14.96□□□□□ -0.02
SCARF1-206ENST00000573852 COX8AP10176 69 aa14.96□□□□□ -0.02
SCARF1-206ENST00000573852 C2orf91Q6ZV80 131 aa14.96□□□□□ -0.02
SCARF1-206ENST00000573852 A0A1W2PRD5 423 aa14.95□□□□□ -0.02
SCARF1-206ENST00000573852 A0A1W2PRF3 423 aa14.95□□□□□ -0.02
SCARF1-206ENST00000573852 A0A1W2PRM7 423 aa14.95□□□□□ -0.02
SCARF1-206ENST00000573852 CT45A10P0DMU9 189 aa14.95□□□□□ -0.02
SCARF1-206ENST00000573852 SIGLEC8Q9NYZ4 499 aa14.95□□□□□ -0.02
SCARF1-206ENST00000573852 ZFHX2Q9C0A1 2572 aaPredicted RBP14.95□□□□□ -0.02
SCARF1-206ENST00000573852 GNG7O60262 68 aa14.95□□□□□ -0.02
SCARF1-206ENST00000573852 GPR183P32249 361 aa14.95□□□□□ -0.02
SCARF1-206ENST00000573852 AMN1Q8IY45 258 aa14.95□□□□□ -0.02
SCARF1-206ENST00000573852 PIP4P2Q8N4L2 257 aa14.95□□□□□ -0.02
SCARF1-206ENST00000573852 CFHR4Q92496 578 aa14.95□□□□□ -0.02
SCARF1-206ENST00000573852 CDKN1BP46527 198 aa14.94□□□□□ -0.02
SCARF1-206ENST00000573852 TMEM189A5PLL7 270 aa14.94□□□□□ -0.02
SCARF1-206ENST00000573852 SH2D1AO60880 128 aa14.94□□□□□ -0.02
SCARF1-206ENST00000573852 OR8A1Q8NGG7 326 aa14.94□□□□□ -0.02
SCARF1-206ENST00000573852 LINC01560Q8TB33 94 aa14.94□□□□□ -0.02
SCARF1-206ENST00000573852 FANCD2OSQ96PS1 177 aa14.94□□□□□ -0.02
SCARF1-206ENST00000573852 AAMDCQ9H7C9 122 aa14.94□□□□□ -0.02
SCARF1-206ENST00000573852 FAM104BQ5XKR9 115 aa14.93□□□□□ -0.02
SCARF1-206ENST00000573852 AMMECR1LQ6DCA0 310 aa14.93□□□□□ -0.02
SCARF1-206ENST00000573852 U3KQK5 164 aa14.93□□□□□ -0.02
SCARF1-206ENST00000573852 F8W735 103 aaPredicted RBP14.93□□□□□ -0.02
SCARF1-206ENST00000573852 PDE6HQ13956 83 aa14.93□□□□□ -0.02
SCARF1-206ENST00000573852 LY6G5BQ8NDX9 201 aa14.93□□□□□ -0.02
SCARF1-206ENST00000573852 PRELID3AQ96N28 172 aa14.93□□□□□ -0.02
SCARF1-206ENST00000573852 RAB1BQ9H0U4 201 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms