RNA–Protein interactions for RNA: ENST00000573694.5

NDE1-208, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 3

Gene NDE1, Length 411 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-208ENST00000573694 SUMO1P63165 101 aaKnown RBP7.34□□□□□ -1.23
NDE1-208ENST00000573694 TMEM241Q24JQ0 296 aa7.34□□□□□ -1.23
NDE1-208ENST00000573694 STXBP6Q8NFX7 210 aa7.34□□□□□ -1.23
NDE1-208ENST00000573694 C2CD4CQ8TF44 421 aa7.34□□□□□ -1.23
NDE1-208ENST00000573694 USMG5Q96IX5 58 aa7.34□□□□□ -1.23
NDE1-208ENST00000573694 C17orf77Q96MU5 243 aa7.34□□□□□ -1.23
NDE1-208ENST00000573694 OR5B12Q96R08 314 aa7.34□□□□□ -1.23
NDE1-208ENST00000573694 Q9H3A6 140 aa7.34□□□□□ -1.23
NDE1-208ENST00000573694 AURKAIP1Q9NWT8 199 aaPredicted RBP7.34□□□□□ -1.23
NDE1-208ENST00000573694 GAR1Q9NY12 217 aaKnown RBP7.34□□□□□ -1.23
NDE1-208ENST00000573694 RABAC1Q9UI14 185 aa7.34□□□□□ -1.23
NDE1-208ENST00000573694 RPH3ALQ9UNE2 315 aa7.34□□□□□ -1.23
NDE1-208ENST00000573694 IGHV3-49A0A0A0MS15 119 aa7.33□□□□□ -1.24
NDE1-208ENST00000573694 RPLP1P05386 114 aaKnown RBP7.33□□□□□ -1.24
NDE1-208ENST00000573694 PRB4P10163 310 aaPredicted RBP7.33□□□□□ -1.24
NDE1-208ENST00000573694 HIST1H1EP10412 219 aaKnown RBP7.33□□□□□ -1.24
NDE1-208ENST00000573694 RANP62826 216 aaKnown RBP7.33□□□□□ -1.24
NDE1-208ENST00000573694 SLC35B1P78383 322 aa7.33□□□□□ -1.24
NDE1-208ENST00000573694 PNRC1Q12796 327 aaPredicted RBP7.33□□□□□ -1.24
NDE1-208ENST00000573694 BPIFA4PQ86YQ2 179 aa7.33□□□□□ -1.24
NDE1-208ENST00000573694 ISOC2Q96AB3 205 aa7.33□□□□□ -1.24
NDE1-208ENST00000573694 ATP6V0BQ99437 205 aa7.33□□□□□ -1.24
NDE1-208ENST00000573694 TRBV19A0A075B6N1 114 aa7.32□□□□□ -1.24
NDE1-208ENST00000573694 IGHV3OR16-13A0A075B7E8 117 aa7.32□□□□□ -1.24
NDE1-208ENST00000573694 IGHV3-74A0A0B4J1X5 117 aa7.32□□□□□ -1.24
NDE1-208ENST00000573694 IGHV3-66A0A0C4DH42 116 aa7.32□□□□□ -1.24
NDE1-208ENST00000573694 PGPA6NDG6 321 aa7.32□□□□□ -1.24
NDE1-208ENST00000573694 PEX7O00628 323 aa7.32□□□□□ -1.24
NDE1-208ENST00000573694 APOHP02749 345 aaPredicted RBP7.32□□□□□ -1.24
NDE1-208ENST00000573694 SLC25A5P05141 298 aaKnown RBP7.32□□□□□ -1.24
NDE1-208ENST00000573694 RPL35P42766 123 aaKnown RBP7.32□□□□□ -1.24
NDE1-208ENST00000573694 RELQ04864 619 aaPredicted RBP7.32□□□□□ -1.24
NDE1-208ENST00000573694 RNF212Q495C1 297 aa7.32□□□□□ -1.24
NDE1-208ENST00000573694 CENPWQ5EE01 88 aa7.32□□□□□ -1.24
NDE1-208ENST00000573694 UNQ9165/PRO28630Q6UXU0 137 aa7.32□□□□□ -1.24
NDE1-208ENST00000573694 LINC01551Q86U37 167 aa7.32□□□□□ -1.24
NDE1-208ENST00000573694 EXOC3-AS1Q8N2X6 119 aa7.32□□□□□ -1.24
NDE1-208ENST00000573694 LINC00479Q96M42 142 aa7.32□□□□□ -1.24
NDE1-208ENST00000573694 SMCO4Q9NRQ5 59 aa7.32□□□□□ -1.24
NDE1-208ENST00000573694 A0A087WWC5 75 aa7.31□□□□□ -1.24
NDE1-208ENST00000573694 TRAV34A0A0B4J273 112 aa7.31□□□□□ -1.24
NDE1-208ENST00000573694 A0A0G2JLM5 398 aa7.31□□□□□ -1.24
NDE1-208ENST00000573694 ADARB2-AS1A8MUL3 147 aa7.31□□□□□ -1.24
NDE1-208ENST00000573694 K7EN84 100 aa7.31□□□□□ -1.24
NDE1-208ENST00000573694 CD28P10747 220 aa7.31□□□□□ -1.24
NDE1-208ENST00000573694 FOXE3Q13461 319 aa7.31□□□□□ -1.24
NDE1-208ENST00000573694 SIGLEC15Q6ZMC9 328 aa7.31□□□□□ -1.24
NDE1-208ENST00000573694 MYOZ3Q8TDC0 251 aa7.31□□□□□ -1.24
NDE1-208ENST00000573694 IGF2BP2-AS1Q96M15 143 aa7.31□□□□□ -1.24
NDE1-208ENST00000573694 CITED2Q99967 270 aaPredicted RBP7.31□□□□□ -1.24
NDE1-208ENST00000573694 OTORQ9NRC9 128 aa7.31□□□□□ -1.24
NDE1-208ENST00000573694 SMAD5-AS1Q9Y6J3 95 aa7.31□□□□□ -1.24
NDE1-208ENST00000573694 B4DEV8 164 aa7.3□□□□□ -1.24
NDE1-208ENST00000573694 C9JCJ5 164 aa7.3□□□□□ -1.24
NDE1-208ENST00000573694 NDUFA4O00483 81 aa7.3□□□□□ -1.24
NDE1-208ENST00000573694 TSPAN4O14817 238 aa7.3□□□□□ -1.24
NDE1-208ENST00000573694 ELANEP08246 267 aa7.3□□□□□ -1.24
NDE1-208ENST00000573694 RPL7P18124 248 aaKnown RBP7.3□□□□□ -1.24
NDE1-208ENST00000573694 CD33P20138 364 aa7.3□□□□□ -1.24
NDE1-208ENST00000573694 EDN2P20800 178 aa7.3□□□□□ -1.24
NDE1-208ENST00000573694 HIST2H2BDQ6DRA6 164 aa7.3□□□□□ -1.24
NDE1-208ENST00000573694 TEX38Q6PEX7 206 aa7.3□□□□□ -1.24
NDE1-208ENST00000573694 C18orf65Q6ZTR6 163 aa7.3□□□□□ -1.24
NDE1-208ENST00000573694 S100A7AQ86SG5 101 aa7.3□□□□□ -1.24
NDE1-208ENST00000573694 OR8I2Q8N0Y5 310 aa7.3□□□□□ -1.24
NDE1-208ENST00000573694 RNF152Q8N8N0 203 aa7.3□□□□□ -1.24
NDE1-208ENST00000573694 C5orf17Q8NAS9 161 aa7.3□□□□□ -1.24
NDE1-208ENST00000573694 TMEM190Q8WZ59 177 aa7.3□□□□□ -1.24
NDE1-208ENST00000573694 DPF1Q92782 380 aa7.3□□□□□ -1.24
NDE1-208ENST00000573694 YPEL4Q96NS1 127 aa7.3□□□□□ -1.24
NDE1-208ENST00000573694 METTL26Q96S19 204 aa7.3□□□□□ -1.24
NDE1-208ENST00000573694 EPDR1Q9UM22 224 aa7.3□□□□□ -1.24
NDE1-208ENST00000573694 U3KQE9 123 aa7.3□□□□□ -1.24
NDE1-208ENST00000573694 HELTA6NFD8 242 aa7.29□□□□□ -1.24
NDE1-208ENST00000573694 COLCA2A8K830 154 aa7.29□□□□□ -1.24
NDE1-208ENST00000573694 ISLRO14498 428 aa7.29□□□□□ -1.24
NDE1-208ENST00000573694 BUB3O43684 328 aa7.29□□□□□ -1.24
NDE1-208ENST00000573694 GGCTO75223 188 aaKnown RBP7.29□□□□□ -1.24
NDE1-208ENST00000573694 IGLV2-8P01709 118 aa7.29□□□□□ -1.24
NDE1-208ENST00000573694 ATF4P18848 351 aaPredicted RBP7.29□□□□□ -1.24
NDE1-208ENST00000573694 HLA-DMBP28068 263 aa7.29□□□□□ -1.24
NDE1-208ENST00000573694 GNG4P50150 75 aa7.29□□□□□ -1.24
NDE1-208ENST00000573694 CNN1P51911 297 aaKnown RBP7.29□□□□□ -1.24
NDE1-208ENST00000573694 EGFEM1PQ0D2K5 195 aa7.29□□□□□ -1.24
NDE1-208ENST00000573694 NSUN5P1Q3KNT7 163 aa7.29□□□□□ -1.24
NDE1-208ENST00000573694 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.29□□□□□ -1.24
NDE1-208ENST00000573694 NHLRC2Q8NBF2 726 aa7.29□□□□□ -1.24
NDE1-208ENST00000573694 OCC1Q8TAD7 63 aa7.29□□□□□ -1.24
NDE1-208ENST00000573694 HIST1H2BAQ96A08 127 aa7.29□□□□□ -1.24
NDE1-208ENST00000573694 SGK494Q96LW2 274 aa7.29□□□□□ -1.24
NDE1-208ENST00000573694 PEF1Q9UBV8 284 aaKnown RBP7.29□□□□□ -1.24
NDE1-208ENST00000573694 URGCP-MRPS24S4R325 110 aa7.29□□□□□ -1.24
NDE1-208ENST00000573694 IGHV4OR15-8A0A075B7B6 117 aa7.28□□□□□ -1.24
NDE1-208ENST00000573694 A0A087WW49 117 aa7.28□□□□□ -1.24
NDE1-208ENST00000573694 A0A087X0K7 114 aa7.28□□□□□ -1.24
NDE1-208ENST00000573694 M0R3E3 92 aa7.28□□□□□ -1.24
NDE1-208ENST00000573694 PF4P02776 101 aa7.28□□□□□ -1.24
NDE1-208ENST00000573694 TCRAP04437 139 aa7.28□□□□□ -1.24
NDE1-208ENST00000573694 LGALS1P09382 135 aaKnown RBP7.28□□□□□ -1.24
NDE1-208ENST00000573694 CDX1P47902 265 aaPredicted RBP7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 114.4 ms