RNA–Protein interactions for RNA: ENST00000572824.1

NPLOC4-210, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-210ENST00000572824 PSG9Q00887 426 aa6.5□□□□□ -1.37
NPLOC4-210ENST00000572824 Q6ZR54 194 aa6.5□□□□□ -1.37
NPLOC4-210ENST00000572824 OR8I2Q8N0Y5 310 aa6.5□□□□□ -1.37
NPLOC4-210ENST00000572824 OR11H7Q8NGC8 314 aa6.5□□□□□ -1.37
NPLOC4-210ENST00000572824 OR1B1Q8NGR6 318 aa6.5□□□□□ -1.37
NPLOC4-210ENST00000572824 C1QTNF4Q9BXJ3 329 aa6.5□□□□□ -1.37
NPLOC4-210ENST00000572824 SLC25A39Q9BZJ4 359 aaPredicted RBP6.5□□□□□ -1.37
NPLOC4-210ENST00000572824 KCNIP3Q9Y2W7 256 aa6.5□□□□□ -1.37
NPLOC4-210ENST00000572824 LINC00854A0A1B0GVQ3 168 aa6.49□□□□□ -1.37
NPLOC4-210ENST00000572824 PMS2P5A8MQ11 134 aa6.49□□□□□ -1.37
NPLOC4-210ENST00000572824 A8MTW9 85 aa6.49□□□□□ -1.37
NPLOC4-210ENST00000572824 H3BRN7 92 aa6.49□□□□□ -1.37
NPLOC4-210ENST00000572824 SYNGR2O43760 224 aa6.49□□□□□ -1.37
NPLOC4-210ENST00000572824 SFT2D2O95562 160 aa6.49□□□□□ -1.37
NPLOC4-210ENST00000572824 MBPP02686 304 aaPredicted RBP6.49□□□□□ -1.37
NPLOC4-210ENST00000572824 SPART-AS1P0CW21 52 aa6.49□□□□□ -1.37
NPLOC4-210ENST00000572824 CNN1P51911 297 aaKnown RBP6.49□□□□□ -1.37
NPLOC4-210ENST00000572824 NUTF2P61970 127 aaKnown RBP6.49□□□□□ -1.37
NPLOC4-210ENST00000572824 RRAS2P62070 204 aaPredicted RBP6.49□□□□□ -1.37
NPLOC4-210ENST00000572824 AKR1C1Q04828 323 aa6.49□□□□□ -1.37
NPLOC4-210ENST00000572824 FGL1Q08830 312 aa6.49□□□□□ -1.37
NPLOC4-210ENST00000572824 SPANXN5Q5MJ07 72 aa6.49□□□□□ -1.37
NPLOC4-210ENST00000572824 LRTM2Q8N967 370 aa6.49□□□□□ -1.37
NPLOC4-210ENST00000572824 SDHCQ99643 169 aaPredicted RBP6.49□□□□□ -1.37
NPLOC4-210ENST00000572824 C7orf50Q9BRJ6 194 aaKnown RBP6.49□□□□□ -1.37
NPLOC4-210ENST00000572824 NIPSNAP3BQ9BS92 247 aa6.49□□□□□ -1.37
NPLOC4-210ENST00000572824 SEPSECSQ9HD40 501 aaKnown RBP6.49□□□□□ -1.37
NPLOC4-210ENST00000572824 RSL24D1Q9UHA3 163 aaKnown RBP6.49□□□□□ -1.37
NPLOC4-210ENST00000572824 RABL2BQ9UNT1 228 aa6.49□□□□□ -1.37
NPLOC4-210ENST00000572824 RFNGQ9Y644 331 aa6.49□□□□□ -1.37
NPLOC4-210ENST00000572824 SMCO3A2RU48 225 aa6.48□□□□□ -1.37
NPLOC4-210ENST00000572824 ISLRO14498 428 aa6.48□□□□□ -1.37
NPLOC4-210ENST00000572824 SSSCA1O60232 199 aa6.48□□□□□ -1.37
NPLOC4-210ENST00000572824 P0DMU3 169 aa6.48□□□□□ -1.37
NPLOC4-210ENST00000572824 FAM231AP0DMU4 169 aa6.48□□□□□ -1.37
NPLOC4-210ENST00000572824 FAM231CP0DMU5 169 aa6.48□□□□□ -1.37
NPLOC4-210ENST00000572824 BTCP35070 178 aa6.48□□□□□ -1.37
NPLOC4-210ENST00000572824 ARL16Q0P5N6 197 aa6.48□□□□□ -1.37
NPLOC4-210ENST00000572824 BAK1Q16611 211 aa6.48□□□□□ -1.37
NPLOC4-210ENST00000572824 TMEM128Q5BJH2 165 aa6.48□□□□□ -1.37
NPLOC4-210ENST00000572824 MORN5Q5VZ52 161 aa6.48□□□□□ -1.37
NPLOC4-210ENST00000572824 CCDC190Q86UF4 302 aa6.48□□□□□ -1.37
NPLOC4-210ENST00000572824 UBE2DNLQ8IWF7 75 aa6.48□□□□□ -1.37
NPLOC4-210ENST00000572824 TOMM5Q8N4H5 51 aa6.48□□□□□ -1.37
NPLOC4-210ENST00000572824 SRRQ9GZT4 340 aa6.48□□□□□ -1.37
NPLOC4-210ENST00000572824 RBM38Q9H0Z9 239 aaKnown RBP6.48□□□□□ -1.37
NPLOC4-210ENST00000572824 SNRPGP15A8MWD9 76 aa6.47□□□□□ -1.37
NPLOC4-210ENST00000572824 PRAC2D3DTV9 90 aa6.47□□□□□ -1.37
NPLOC4-210ENST00000572824 SLC17A3O00476 420 aa6.47□□□□□ -1.37
NPLOC4-210ENST00000572824 HBE1P02100 147 aa6.47□□□□□ -1.37
NPLOC4-210ENST00000572824 DEFB130BP0DP73 79 aa6.47□□□□□ -1.37
NPLOC4-210ENST00000572824 DEFB130AP0DP74 79 aa6.47□□□□□ -1.37
NPLOC4-210ENST00000572824 ANXA3P12429 323 aa6.47□□□□□ -1.37
NPLOC4-210ENST00000572824 ANXA7P20073 488 aaKnown RBP6.47□□□□□ -1.37
NPLOC4-210ENST00000572824 ID1P41134 155 aa6.47□□□□□ -1.37
NPLOC4-210ENST00000572824 RAB11AP62491 216 aa6.47□□□□□ -1.37
NPLOC4-210ENST00000572824 SRPXP78539 464 aa6.47□□□□□ -1.37
NPLOC4-210ENST00000572824 SLC38A11Q08AI6 406 aa6.47□□□□□ -1.37
NPLOC4-210ENST00000572824 C1orf194Q5T5A4 169 aa6.47□□□□□ -1.37
NPLOC4-210ENST00000572824 PATE2Q6UY27 113 aa6.47□□□□□ -1.37
NPLOC4-210ENST00000572824 NOXA1Q86UR1 476 aa6.47□□□□□ -1.37
NPLOC4-210ENST00000572824 CENPSQ8N2Z9 138 aa6.47□□□□□ -1.37
NPLOC4-210ENST00000572824 OR4D5Q8NGN0 318 aa6.47□□□□□ -1.37
NPLOC4-210ENST00000572824 RCL1Q9Y2P8 373 aaKnown RBP6.47□□□□□ -1.37
NPLOC4-210ENST00000572824 GOLT1BQ9Y3E0 138 aa6.47□□□□□ -1.37
NPLOC4-210ENST00000572824 DUXBA0A1W2PPF3 345 aa6.46□□□□□ -1.38
NPLOC4-210ENST00000572824 C9orf170A2RU37 121 aa6.46□□□□□ -1.38
NPLOC4-210ENST00000572824 CCSO14618 274 aa6.46□□□□□ -1.38
NPLOC4-210ENST00000572824 MRPS12O15235 138 aaKnown RBP6.46□□□□□ -1.38
NPLOC4-210ENST00000572824 METTL15P1P0C7V9 234 aa6.46□□□□□ -1.38
NPLOC4-210ENST00000572824 LINC00869P0C866 280 aa6.46□□□□□ -1.38
NPLOC4-210ENST00000572824 GALR1P47211 349 aa6.46□□□□□ -1.38
NPLOC4-210ENST00000572824 DAD1P61803 113 aa6.46□□□□□ -1.38
NPLOC4-210ENST00000572824 HIST1H1AQ02539 215 aaPredicted RBP6.46□□□□□ -1.38
NPLOC4-210ENST00000572824 RRN3P1Q2M238 152 aa6.46□□□□□ -1.38
NPLOC4-210ENST00000572824 SUMO4Q6EEV6 95 aa6.46□□□□□ -1.38
NPLOC4-210ENST00000572824 EBLN2Q6P2I7 272 aa6.46□□□□□ -1.38
NPLOC4-210ENST00000572824 CYP2G1PQ6ZSU1 146 aa6.46□□□□□ -1.38
NPLOC4-210ENST00000572824 LINC00336Q6ZUF6 198 aa6.46□□□□□ -1.38
NPLOC4-210ENST00000572824 ZNF738Q8NE65 137 aa6.46□□□□□ -1.38
NPLOC4-210ENST00000572824 IGF2BP2-AS1Q96M15 143 aa6.46□□□□□ -1.38
NPLOC4-210ENST00000572824 SCGB3A2Q96PL1 93 aa6.46□□□□□ -1.38
NPLOC4-210ENST00000572824 BCL7BQ9BQE9 202 aa6.46□□□□□ -1.38
NPLOC4-210ENST00000572824 SHANK2-AS3Q9BTD1 123 aa6.46□□□□□ -1.38
NPLOC4-210ENST00000572824 KRTAP1-5Q9BYS1 174 aa6.46□□□□□ -1.38
NPLOC4-210ENST00000572824 RPRMQ9NS64 109 aa6.46□□□□□ -1.38
NPLOC4-210ENST00000572824 CCDC160A6NGH7 325 aa6.45□□□□□ -1.38
NPLOC4-210ENST00000572824 SMIM9A6NGZ8 99 aa6.45□□□□□ -1.38
NPLOC4-210ENST00000572824 SLC25A6P12236 298 aa6.45□□□□□ -1.38
NPLOC4-210ENST00000572824 HTN1P15515 57 aa6.45□□□□□ -1.38
NPLOC4-210ENST00000572824 CXCL3P19876 107 aa6.45□□□□□ -1.38
NPLOC4-210ENST00000572824 NUP62P37198 522 aaPredicted RBP6.45□□□□□ -1.38
NPLOC4-210ENST00000572824 LGALS9BQ3B8N2 356 aa6.45□□□□□ -1.38
NPLOC4-210ENST00000572824 C4orf46Q504U0 113 aa6.45□□□□□ -1.38
NPLOC4-210ENST00000572824 BPIFCQ8NFQ6 507 aa6.45□□□□□ -1.38
NPLOC4-210ENST00000572824 TMEM208Q9BTX3 173 aa6.45□□□□□ -1.38
NPLOC4-210ENST00000572824 TMEM147Q9BVK8 224 aa6.45□□□□□ -1.38
NPLOC4-210ENST00000572824 PSENENQ9NZ42 101 aa6.45□□□□□ -1.38
NPLOC4-210ENST00000572824 STRAPQ9Y3F4 350 aaKnown RBP6.45□□□□□ -1.38
NPLOC4-210ENST00000572824 TMED3Q9Y3Q3 217 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms