RNA–Protein interactions for RNA: ENST00000571263.2

CDRT1-206, CMT1A duplicated region transcript 1, humanhuman

TSL 1 (best)

Gene CDRT1, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-206ENST00000571263 DYNLRB2Q8TF09 96 aa9.05□□□□□ -0.96
CDRT1-206ENST00000571263 RPUSD4Q96CM3 377 aaKnown RBP9.05□□□□□ -0.96
CDRT1-206ENST00000571263 NRN1Q9NPD7 142 aa9.05□□□□□ -0.96
CDRT1-206ENST00000571263 OTORQ9NRC9 128 aa9.05□□□□□ -0.96
CDRT1-206ENST00000571263 ZNF586Q9NXT0 402 aa9.05□□□□□ -0.96
CDRT1-206ENST00000571263 PRELID1Q9Y255 219 aa9.05□□□□□ -0.96
CDRT1-206ENST00000571263 IGHV3-49A0A0A0MS15 119 aa9.04□□□□□ -0.96
CDRT1-206ENST00000571263 IGHV3-66A0A0C4DH42 116 aa9.04□□□□□ -0.96
CDRT1-206ENST00000571263 FAM74A7A6NL05 159 aa9.04□□□□□ -0.96
CDRT1-206ENST00000571263 H3BQ15 152 aa9.04□□□□□ -0.96
CDRT1-206ENST00000571263 EIF3GO75821 320 aaKnown RBP eCLIP9.04□□□□□ -0.96
CDRT1-206ENST00000571263 ID1P41134 155 aa9.04□□□□□ -0.96
CDRT1-206ENST00000571263 RIPPLY3P57055 190 aa9.04□□□□□ -0.96
CDRT1-206ENST00000571263 RANP62826 216 aaKnown RBP9.04□□□□□ -0.96
CDRT1-206ENST00000571263 RPL11P62913 178 aaKnown RBP9.04□□□□□ -0.96
CDRT1-206ENST00000571263 HAGHQ16775 308 aa9.04□□□□□ -0.96
CDRT1-206ENST00000571263 FAM90A2PQ658T7 463 aa9.04□□□□□ -0.96
CDRT1-206ENST00000571263 RBPMS2Q6ZRY4 209 aaKnown RBP9.04□□□□□ -0.96
CDRT1-206ENST00000571263 LINC00482Q8N8I6 264 aa9.04□□□□□ -0.96
CDRT1-206ENST00000571263 BLNKQ8WV28 456 aa9.04□□□□□ -0.96
CDRT1-206ENST00000571263 MLXQ9UH92 298 aa9.04□□□□□ -0.96
CDRT1-206ENST00000571263 SMAD5-AS1Q9Y6J3 95 aa9.04□□□□□ -0.96
CDRT1-206ENST00000571263 TEP1Q99973 2627 aaKnown RBP9.04□□□□□ -0.96
CDRT1-206ENST00000571263 IGHV3OR16-13A0A075B7E8 117 aa9.03□□□□□ -0.96
CDRT1-206ENST00000571263 IGHV3-74A0A0B4J1X5 117 aa9.03□□□□□ -0.96
CDRT1-206ENST00000571263 SERTM2A0A1B0GWG4 89 aa9.03□□□□□ -0.96
CDRT1-206ENST00000571263 C11orf94C9JXX5 98 aa9.03□□□□□ -0.96
CDRT1-206ENST00000571263 TMEM250H0YL14 139 aa9.03□□□□□ -0.96
CDRT1-206ENST00000571263 CSN1S1P47710 185 aa9.03□□□□□ -0.96
CDRT1-206ENST00000571263 CMC4P56277 68 aaPredicted RBP9.03□□□□□ -0.96
CDRT1-206ENST00000571263 DEFB114Q30KQ6 69 aa9.03□□□□□ -0.96
CDRT1-206ENST00000571263 TOR2AQ5JU69 321 aa9.03□□□□□ -0.96
CDRT1-206ENST00000571263 HIST1H2BAQ96A08 127 aa9.03□□□□□ -0.96
CDRT1-206ENST00000571263 GPR61Q9BZJ8 451 aa9.03□□□□□ -0.96
CDRT1-206ENST00000571263 ZNF331Q9NQX6 463 aaPredicted RBP9.03□□□□□ -0.96
CDRT1-206ENST00000571263 PGPA6NDG6 321 aa9.02□□□□□ -0.97
CDRT1-206ENST00000571263 FBLL1A6NHQ2 334 aaKnown RBP9.02□□□□□ -0.97
CDRT1-206ENST00000571263 K7EQM0 130 aa9.02□□□□□ -0.97
CDRT1-206ENST00000571263 DNASE2O00115 360 aaPredicted RBP9.02□□□□□ -0.97
CDRT1-206ENST00000571263 ISLRO14498 428 aa9.02□□□□□ -0.97
CDRT1-206ENST00000571263 TSPAN4O14817 238 aa9.02□□□□□ -0.97
CDRT1-206ENST00000571263 S100A9P06702 114 aaKnown RBP9.02□□□□□ -0.97
CDRT1-206ENST00000571263 UBE2G2P60604 165 aa9.02□□□□□ -0.97
CDRT1-206ENST00000571263 SUMO1P63165 101 aaKnown RBP9.02□□□□□ -0.97
CDRT1-206ENST00000571263 C9orf66Q5T8R8 295 aa9.02□□□□□ -0.97
CDRT1-206ENST00000571263 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.02□□□□□ -0.97
CDRT1-206ENST00000571263 CCDC28AQ8IWP9 274 aa9.02□□□□□ -0.97
CDRT1-206ENST00000571263 C5orf17Q8NAS9 161 aa9.02□□□□□ -0.97
CDRT1-206ENST00000571263 WFDC9Q8NEX5 89 aa9.02□□□□□ -0.97
CDRT1-206ENST00000571263 CMTM2Q8TAZ6 248 aa9.02□□□□□ -0.97
CDRT1-206ENST00000571263 MRPL53Q96EL3 112 aaKnown RBP9.02□□□□□ -0.97
CDRT1-206ENST00000571263 C16orf92Q96LL3 132 aa9.02□□□□□ -0.97
CDRT1-206ENST00000571263 Q9H3A6 140 aa9.02□□□□□ -0.97
CDRT1-206ENST00000571263 TREM1Q9NP99 234 aa9.02□□□□□ -0.97
CDRT1-206ENST00000571263 CUBNO60494 3623 aa9.01□□□□□ -0.97
CDRT1-206ENST00000571263 SAP30O75446 220 aa9.01□□□□□ -0.97
CDRT1-206ENST00000571263 NDUFB4O95168 129 aa9.01□□□□□ -0.97
CDRT1-206ENST00000571263 SNRPD3P62318 126 aaKnown RBP9.01□□□□□ -0.97
CDRT1-206ENST00000571263 ICAM4Q14773 271 aa9.01□□□□□ -0.97
CDRT1-206ENST00000571263 HIST2H2BDQ6DRA6 164 aa9.01□□□□□ -0.97
CDRT1-206ENST00000571263 ADAMTSL5Q6ZMM2 481 aa9.01□□□□□ -0.97
CDRT1-206ENST00000571263 SPAG8Q99932 426 aaPredicted RBP9.01□□□□□ -0.97
CDRT1-206ENST00000571263 RARRES2Q99969 163 aa9.01□□□□□ -0.97
CDRT1-206ENST00000571263 SLC35B3Q9H1N7 401 aa9.01□□□□□ -0.97
CDRT1-206ENST00000571263 YTHDF2Q9Y5A9 579 aaKnown RBP9.01□□□□□ -0.97
CDRT1-206ENST00000571263 C2CD3Q4AC94 2353 aa9□□□□□ -0.97
CDRT1-206ENST00000571263 OR4C46A6NHA9 309 aa9□□□□□ -0.97
CDRT1-206ENST00000571263 SLC25A5P05141 298 aaKnown RBP9□□□□□ -0.97
CDRT1-206ENST00000571263 CD33P20138 364 aa9□□□□□ -0.97
CDRT1-206ENST00000571263 CD81P60033 236 aa9□□□□□ -0.97
CDRT1-206ENST00000571263 FAM74A3Q4VXF1 159 aa9□□□□□ -0.97
CDRT1-206ENST00000571263 LCN12Q6JVE5 192 aa9□□□□□ -0.97
CDRT1-206ENST00000571263 C17orf77Q96MU5 243 aa9□□□□□ -0.97
CDRT1-206ENST00000571263 MS4A6AQ9H2W1 248 aa9□□□□□ -0.97
CDRT1-206ENST00000571263 EPDR1Q9UM22 224 aa9□□□□□ -0.97
CDRT1-206ENST00000571263 KRBOX1C9JBD0 128 aa8.99□□□□□ -0.97
CDRT1-206ENST00000571263 K7EQG2 157 aa8.99□□□□□ -0.97
CDRT1-206ENST00000571263 IGLV1-51P01701 117 aa8.99□□□□□ -0.97
CDRT1-206ENST00000571263 SRP19P09132 144 aaKnown RBP8.99□□□□□ -0.97
CDRT1-206ENST00000571263 ATP5G3P48201 142 aa8.99□□□□□ -0.97
CDRT1-206ENST00000571263 PSG3Q16557 428 aa8.99□□□□□ -0.97
CDRT1-206ENST00000571263 DCANP1Q8TF63 244 aa8.99□□□□□ -0.97
CDRT1-206ENST00000571263 C11orf52Q96A22 123 aa8.99□□□□□ -0.97
CDRT1-206ENST00000571263 ATG101Q9BSB4 218 aa8.99□□□□□ -0.97
CDRT1-206ENST00000571263 ZMAT5Q9UDW3 170 aaKnown RBP8.99□□□□□ -0.97
CDRT1-206ENST00000571263 GGTLC3B5MD39 225 aa8.98□□□□□ -0.97
CDRT1-206ENST00000571263 H3BTX0 84 aa8.98□□□□□ -0.97
CDRT1-206ENST00000571263 SOCS3O14543 225 aa8.98□□□□□ -0.97
CDRT1-206ENST00000571263 EDN2P20800 178 aa8.98□□□□□ -0.97
CDRT1-206ENST00000571263 CD300EQ496F6 205 aaPredicted RBP8.98□□□□□ -0.97
CDRT1-206ENST00000571263 SOHLH1Q5JUK2 328 aa8.98□□□□□ -0.97
CDRT1-206ENST00000571263 SLC7A5P1Q8MH63 180 aa8.98□□□□□ -0.97
CDRT1-206ENST00000571263 EXOC3-AS1Q8N2X6 119 aa8.98□□□□□ -0.97
CDRT1-206ENST00000571263 CITED4Q96RK1 184 aa8.98□□□□□ -0.97
CDRT1-206ENST00000571263 IGKV3-7A0A075B6H7 116 aa8.97□□□□□ -0.97
CDRT1-206ENST00000571263 TMEM218A2RU14 115 aa8.97□□□□□ -0.97
CDRT1-206ENST00000571263 RBAKDNA6NC62 111 aa8.97□□□□□ -0.97
CDRT1-206ENST00000571263 DIRC3C9JPN6 131 aa8.97□□□□□ -0.97
CDRT1-206ENST00000571263 SLC17A3O00476 420 aa8.97□□□□□ -0.97
CDRT1-206ENST00000571263 PEX7O00628 323 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms