RNA–Protein interactions for RNA: ENST00000571043.5

RPAIN-208, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,547 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-208ENST00000571043 H3BTX0 84 aa13.42□□□□□ -0.26
RPAIN-208ENST00000571043 RPL7P18124 248 aaKnown RBP13.42□□□□□ -0.26
RPAIN-208ENST00000571043 SNRPEP62304 92 aaKnown RBP13.42□□□□□ -0.26
RPAIN-208ENST00000571043 FMC1Q96HJ9 113 aa13.42□□□□□ -0.26
RPAIN-208ENST00000571043 ZNF414Q96IQ9 312 aa13.42□□□□□ -0.26
RPAIN-208ENST00000571043 TRAV34A0A0B4J273 112 aa13.41□□□□□ -0.26
RPAIN-208ENST00000571043 AP4M1O00189 453 aa13.41□□□□□ -0.26
RPAIN-208ENST00000571043 PHOX2AO14813 284 aa13.41□□□□□ -0.26
RPAIN-208ENST00000571043 MGST1P10620 155 aaKnown RBP13.41□□□□□ -0.26
RPAIN-208ENST00000571043 PPIFP30405 207 aaKnown RBP13.41□□□□□ -0.26
RPAIN-208ENST00000571043 RAB9AP51151 201 aa13.41□□□□□ -0.26
RPAIN-208ENST00000571043 TOMM20LQ6UXN7 152 aa13.41□□□□□ -0.26
RPAIN-208ENST00000571043 CLEC19AQ6UXS0 136 aa13.41□□□□□ -0.26
RPAIN-208ENST00000571043 SIGLEC15Q6ZMC9 328 aa13.41□□□□□ -0.26
RPAIN-208ENST00000571043 FAM231DQ6ZW35 169 aa13.41□□□□□ -0.26
RPAIN-208ENST00000571043 CMTM2Q8TAZ6 248 aa13.41□□□□□ -0.26
RPAIN-208ENST00000571043 ZNF418Q8TF45 676 aaPredicted RBP13.41□□□□□ -0.26
RPAIN-208ENST00000571043 VPREB3Q9UKI3 123 aa13.41□□□□□ -0.26
RPAIN-208ENST00000571043 JMJD1CQ15652 2540 aa13.4□□□□□ -0.26
RPAIN-208ENST00000571043 TRBV6-1A0A0K0K1D8 114 aa13.4□□□□□ -0.26
RPAIN-208ENST00000571043 RELQ04864 619 aaPredicted RBP13.4□□□□□ -0.26
RPAIN-208ENST00000571043 GPR82Q96P67 336 aa13.4□□□□□ -0.26
RPAIN-208ENST00000571043 ZFAND3Q9H8U3 227 aa13.4□□□□□ -0.26
RPAIN-208ENST00000571043 SLC17A3O00476 420 aa13.39□□□□□ -0.27
RPAIN-208ENST00000571043 UBE2CO00762 179 aa13.39□□□□□ -0.27
RPAIN-208ENST00000571043 TRGV3P03979 118 aa13.39□□□□□ -0.27
RPAIN-208ENST00000571043 BLCAPP62952 87 aa13.39□□□□□ -0.27
RPAIN-208ENST00000571043 USMG5Q96IX5 58 aa13.39□□□□□ -0.27
RPAIN-208ENST00000571043 ESM1Q9NQ30 184 aa13.39□□□□□ -0.27
RPAIN-208ENST00000571043 LINC00527Q9UJ94 153 aa13.39□□□□□ -0.27
RPAIN-208ENST00000571043 ZNF320A2RRD8 509 aa13.39□□□□□ -0.27
RPAIN-208ENST00000571043 HIST1H2BKO60814 126 aa13.39□□□□□ -0.27
RPAIN-208ENST00000571043 HIST1H2BJP06899 126 aa13.39□□□□□ -0.27
RPAIN-208ENST00000571043 HIST1H2BOP23527 126 aa13.39□□□□□ -0.27
RPAIN-208ENST00000571043 HIST1H2BBP33778 126 aa13.39□□□□□ -0.27
RPAIN-208ENST00000571043 HIST1H2BDP58876 126 aa13.39□□□□□ -0.27
RPAIN-208ENST00000571043 HILS1P60008 231 aa13.39□□□□□ -0.27
RPAIN-208ENST00000571043 HIST1H2BCP62807 126 aa13.39□□□□□ -0.27
RPAIN-208ENST00000571043 HIST2H2BEQ16778 126 aa13.39□□□□□ -0.27
RPAIN-208ENST00000571043 RPEL1Q2QD12 228 aa13.39□□□□□ -0.27
RPAIN-208ENST00000571043 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.39□□□□□ -0.27
RPAIN-208ENST00000571043 IBA57Q5T440 356 aaKnown RBP13.39□□□□□ -0.27
RPAIN-208ENST00000571043 EXOC3-AS1Q8N2X6 119 aa13.39□□□□□ -0.27
RPAIN-208ENST00000571043 ARL6IP6Q8N6S5 226 aa13.39□□□□□ -0.27
RPAIN-208ENST00000571043 FRZBQ92765 325 aa13.39□□□□□ -0.27
RPAIN-208ENST00000571043 HIST1H2BHQ93079 126 aa13.39□□□□□ -0.27
RPAIN-208ENST00000571043 C17orf77Q96MU5 243 aa13.39□□□□□ -0.27
RPAIN-208ENST00000571043 HIST1H2BNQ99877 126 aa13.39□□□□□ -0.27
RPAIN-208ENST00000571043 HIST1H2BMQ99879 126 aa13.39□□□□□ -0.27
RPAIN-208ENST00000571043 MLST8Q9BVC4 326 aa13.39□□□□□ -0.27
RPAIN-208ENST00000571043 RNASE7Q9H1E1 156 aaKnown RBP13.39□□□□□ -0.27
RPAIN-208ENST00000571043 GNB4Q9HAV0 340 aa13.39□□□□□ -0.27
RPAIN-208ENST00000571043 RPH3ALQ9UNE2 315 aa13.39□□□□□ -0.27
RPAIN-208ENST00000571043 SETD2Q9BYW2 2564 aaPredicted RBP13.38□□□□□ -0.27
RPAIN-208ENST00000571043 DNAJC9-AS1A6NH13 148 aa13.38□□□□□ -0.27
RPAIN-208ENST00000571043 ZNF253O75346 499 aa13.38□□□□□ -0.27
RPAIN-208ENST00000571043 LTAP01374 205 aa13.38□□□□□ -0.27
RPAIN-208ENST00000571043 PSG9Q00887 426 aa13.38□□□□□ -0.27
RPAIN-208ENST00000571043 TRGC1P0CF51 173 aa13.37□□□□□ -0.27
RPAIN-208ENST00000571043 TPPP2P59282 170 aa13.37□□□□□ -0.27
RPAIN-208ENST00000571043 FABP9Q0Z7S8 132 aa13.37□□□□□ -0.27
RPAIN-208ENST00000571043 SMUG1Q53HV7 270 aa13.37□□□□□ -0.27
RPAIN-208ENST00000571043 OR8I2Q8N0Y5 310 aa13.37□□□□□ -0.27
RPAIN-208ENST00000571043 DUX5Q96PT3 197 aa13.37□□□□□ -0.27
RPAIN-208ENST00000571043 JMJD8Q96S16 334 aa13.37□□□□□ -0.27
RPAIN-208ENST00000571043 K7EQM0 130 aa13.36□□□□□ -0.27
RPAIN-208ENST00000571043 IGLV1-40P01703 118 aa13.36□□□□□ -0.27
RPAIN-208ENST00000571043 RPL19P84098 196 aaKnown RBP13.36□□□□□ -0.27
RPAIN-208ENST00000571043 CFHR3Q02985 330 aa13.36□□□□□ -0.27
RPAIN-208ENST00000571043 ACTL10Q5JWF8 245 aa13.36□□□□□ -0.27
RPAIN-208ENST00000571043 C1orf194Q5T5A4 169 aa13.36□□□□□ -0.27
RPAIN-208ENST00000571043 TMEM75Q8N9X5 138 aa13.36□□□□□ -0.27
RPAIN-208ENST00000571043 NHLRC2Q8NBF2 726 aa13.36□□□□□ -0.27
RPAIN-208ENST00000571043 NOL4LQ96MY1 436 aaPredicted RBP13.36□□□□□ -0.27
RPAIN-208ENST00000571043 AAMDCQ9H7C9 122 aa13.36□□□□□ -0.27
RPAIN-208ENST00000571043 SERTM2A0A1B0GWG4 89 aa13.35□□□□□ -0.27
RPAIN-208ENST00000571043 RPL15P61313 204 aaKnown RBP13.35□□□□□ -0.27
RPAIN-208ENST00000571043 GOLT1AQ6ZVE7 132 aa13.35□□□□□ -0.27
RPAIN-208ENST00000571043 ZNF492Q9P255 531 aa13.35□□□□□ -0.27
RPAIN-208ENST00000571043 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.34□□□□□ -0.27
RPAIN-208ENST00000571043 IGHV3-35A0A0C4DH35 117 aa13.34□□□□□ -0.27
RPAIN-208ENST00000571043 SMIM27A0A1W2PRY6 76 aa13.34□□□□□ -0.27
RPAIN-208ENST00000571043 CLPSL1A2RUU4 121 aa13.34□□□□□ -0.27
RPAIN-208ENST00000571043 ZNF705GA8MUZ8 300 aaPredicted RBP13.34□□□□□ -0.27
RPAIN-208ENST00000571043 TCF21O43680 179 aa13.34□□□□□ -0.27
RPAIN-208ENST00000571043 BUB3O43684 328 aa13.34□□□□□ -0.27
RPAIN-208ENST00000571043 GATCO43716 136 aaKnown RBP13.34□□□□□ -0.27
RPAIN-208ENST00000571043 IGLV2-11P01706 119 aa13.34□□□□□ -0.27
RPAIN-208ENST00000571043 HOXA5P20719 270 aa13.34□□□□□ -0.27
RPAIN-208ENST00000571043 NDUFA6P56556 154 aa13.34□□□□□ -0.27
RPAIN-208ENST00000571043 Q6ZS46 218 aa13.34□□□□□ -0.27
RPAIN-208ENST00000571043 Q86TA4 180 aa13.34□□□□□ -0.27
RPAIN-208ENST00000571043 TMEM183AQ8IXX5 376 aa13.34□□□□□ -0.27
RPAIN-208ENST00000571043 NUDT10Q8NFP7 164 aa13.34□□□□□ -0.27
RPAIN-208ENST00000571043 NUDT11Q96G61 164 aa13.34□□□□□ -0.27
RPAIN-208ENST00000571043 GRAMD2BQ96HH9 432 aa13.34□□□□□ -0.27
RPAIN-208ENST00000571043 METTL26Q96S19 204 aa13.34□□□□□ -0.27
RPAIN-208ENST00000571043 SMAD5-AS1Q9Y6J3 95 aa13.34□□□□□ -0.27
RPAIN-208ENST00000571043 C2CD3Q4AC94 2353 aa13.34□□□□□ -0.27
RPAIN-208ENST00000571043 A0A087X0K7 114 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms