RNA–Protein interactions for RNA: ENST00000570641.1

SPNS2-202, Transcript of sphingolipid transporter 2, humanhuman

TSL 5

Gene SPNS2, Length 783 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPNS2-202ENST00000570641 VAX2Q9UIW0 290 aa13.72□□□□□ -0.21
SPNS2-202ENST00000570641 SMAD5-AS1Q9Y6J3 95 aa13.72□□□□□ -0.21
SPNS2-202ENST00000570641 ATRQ13535 2644 aa13.72□□□□□ -0.21
SPNS2-202ENST00000570641 TRBV19A0A075B6N1 114 aa13.71□□□□□ -0.21
SPNS2-202ENST00000570641 PEA15Q15121 130 aa13.71□□□□□ -0.21
SPNS2-202ENST00000570641 LINC00482Q8N8I6 264 aa13.71□□□□□ -0.21
SPNS2-202ENST00000570641 DYNLRB2Q8TF09 96 aa13.71□□□□□ -0.21
SPNS2-202ENST00000570641 TXNDC17Q9BRA2 123 aa13.71□□□□□ -0.21
SPNS2-202ENST00000570641 SIGLEC8Q9NYZ4 499 aa13.71□□□□□ -0.21
SPNS2-202ENST00000570641 FAM74A7A6NL05 159 aa13.7□□□□□ -0.22
SPNS2-202ENST00000570641 ZNF253O75346 499 aa13.7□□□□□ -0.22
SPNS2-202ENST00000570641 SNRPCP09234 159 aaKnown RBP13.7□□□□□ -0.22
SPNS2-202ENST00000570641 RPL11P62913 178 aaKnown RBP13.7□□□□□ -0.22
SPNS2-202ENST00000570641 PSG9Q00887 426 aa13.7□□□□□ -0.22
SPNS2-202ENST00000570641 CST9LP1Q5W188 147 aa13.7□□□□□ -0.22
SPNS2-202ENST00000570641 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.7□□□□□ -0.22
SPNS2-202ENST00000570641 ADAMTSL5Q6ZMM2 481 aa13.7□□□□□ -0.22
SPNS2-202ENST00000570641 LYPD1Q8N2G4 141 aa13.7□□□□□ -0.22
SPNS2-202ENST00000570641 NKX6-2Q9C056 277 aaPredicted RBP13.7□□□□□ -0.22
SPNS2-202ENST00000570641 SMDT1Q9H4I9 107 aa13.7□□□□□ -0.22
SPNS2-202ENST00000570641 YTHDF2Q9Y5A9 579 aaKnown RBP13.7□□□□□ -0.22
SPNS2-202ENST00000570641 H3BTX0 84 aa13.69□□□□□ -0.22
SPNS2-202ENST00000570641 ICAM4Q14773 271 aa13.69□□□□□ -0.22
SPNS2-202ENST00000570641 FAM90A2PQ658T7 463 aa13.69□□□□□ -0.22
SPNS2-202ENST00000570641 UQCC3Q6UW78 93 aa13.69□□□□□ -0.22
SPNS2-202ENST00000570641 EIF4E3Q8N5X7 224 aaKnown RBP13.69□□□□□ -0.22
SPNS2-202ENST00000570641 RXFP4Q8TDU9 374 aa13.69□□□□□ -0.22
SPNS2-202ENST00000570641 RARRES2Q99969 163 aa13.69□□□□□ -0.22
SPNS2-202ENST00000570641 SLC50A1Q9BRV3 221 aa13.69□□□□□ -0.22
SPNS2-202ENST00000570641 MLXQ9UH92 298 aa13.69□□□□□ -0.22
SPNS2-202ENST00000570641 C11orf94C9JXX5 98 aa13.68□□□□□ -0.22
SPNS2-202ENST00000570641 NDUFB4O95168 129 aa13.68□□□□□ -0.22
SPNS2-202ENST00000570641 RANP62826 216 aaKnown RBP13.68□□□□□ -0.22
SPNS2-202ENST00000570641 MEF2BQ02080 365 aaPredicted RBP13.68□□□□□ -0.22
SPNS2-202ENST00000570641 SAMD13Q5VXD3 122 aa13.68□□□□□ -0.22
SPNS2-202ENST00000570641 C17orf77Q96MU5 243 aa13.68□□□□□ -0.22
SPNS2-202ENST00000570641 Q9H3A6 140 aa13.68□□□□□ -0.22
SPNS2-202ENST00000570641 TREM1Q9NP99 234 aa13.68□□□□□ -0.22
SPNS2-202ENST00000570641 NRN1Q9NPD7 142 aa13.68□□□□□ -0.22
SPNS2-202ENST00000570641 OTORQ9NRC9 128 aa13.68□□□□□ -0.22
SPNS2-202ENST00000570641 NDUFS6O75380 124 aaKnown RBP13.67□□□□□ -0.22
SPNS2-202ENST00000570641 ATP5G3P48201 142 aa13.67□□□□□ -0.22
SPNS2-202ENST00000570641 SLC7A5P1Q8MH63 180 aa13.67□□□□□ -0.22
SPNS2-202ENST00000570641 AAMDCQ9H7C9 122 aa13.67□□□□□ -0.22
SPNS2-202ENST00000570641 PGPA6NDG6 321 aa13.66□□□□□ -0.22
SPNS2-202ENST00000570641 SLC17A3O00476 420 aa13.66□□□□□ -0.22
SPNS2-202ENST00000570641 SUMO1P63165 101 aaKnown RBP13.66□□□□□ -0.22
SPNS2-202ENST00000570641 PAFAH1B2P68402 229 aa13.66□□□□□ -0.22
SPNS2-202ENST00000570641 DEFB114Q30KQ6 69 aa13.66□□□□□ -0.22
SPNS2-202ENST00000570641 ZNF331Q9NQX6 463 aaPredicted RBP13.66□□□□□ -0.22
SPNS2-202ENST00000570641 CLEC5AQ9NY25 188 aa13.66□□□□□ -0.22
SPNS2-202ENST00000570641 IGKV3-7A0A075B6H7 116 aa13.65□□□□□ -0.22
SPNS2-202ENST00000570641 TRAV25A0A0B4J276 109 aa13.65□□□□□ -0.22
SPNS2-202ENST00000570641 GGTLC3B5MD39 225 aa13.65□□□□□ -0.22
SPNS2-202ENST00000570641 F6UZH7 168 aa13.65□□□□□ -0.22
SPNS2-202ENST00000570641 PDE6DO43924 150 aa13.65□□□□□ -0.22
SPNS2-202ENST00000570641 SAP30O75446 220 aa13.65□□□□□ -0.22
SPNS2-202ENST00000570641 CD81P60033 236 aa13.65□□□□□ -0.22
SPNS2-202ENST00000570641 SRSF3P84103 164 aaKnown RBP13.65□□□□□ -0.22
SPNS2-202ENST00000570641 RBPMS2Q6ZRY4 209 aaKnown RBP13.65□□□□□ -0.22
SPNS2-202ENST00000570641 C16orf92Q96LL3 132 aa13.65□□□□□ -0.22
SPNS2-202ENST00000570641 TCEAL7Q9BRU2 100 aa13.65□□□□□ -0.22
SPNS2-202ENST00000570641 PRELID1Q9Y255 219 aa13.65□□□□□ -0.22
SPNS2-202ENST00000570641 SELENOKQ9Y6D0 94 aa13.65□□□□□ -0.22
SPNS2-202ENST00000570641 NBEAL1Q6ZS30 2694 aa13.64□□□□□ -0.23
SPNS2-202ENST00000570641 DNASE2O00115 360 aaPredicted RBP13.64□□□□□ -0.23
SPNS2-202ENST00000570641 SLC25A5P05141 298 aaKnown RBP13.64□□□□□ -0.23
SPNS2-202ENST00000570641 CCDC28AQ8IWP9 274 aa13.64□□□□□ -0.23
SPNS2-202ENST00000570641 C5orf17Q8NAS9 161 aa13.64□□□□□ -0.23
SPNS2-202ENST00000570641 CMTM2Q8TAZ6 248 aa13.64□□□□□ -0.23
SPNS2-202ENST00000570641 CITED4Q96RK1 184 aa13.64□□□□□ -0.23
SPNS2-202ENST00000570641 MS4A6AQ9H2W1 248 aa13.64□□□□□ -0.23
SPNS2-202ENST00000570641 TRAV2A0A0B4J234 112 aa13.63□□□□□ -0.23
SPNS2-202ENST00000570641 ISLRO14498 428 aa13.63□□□□□ -0.23
SPNS2-202ENST00000570641 TSPAN4O14817 238 aa13.63□□□□□ -0.23
SPNS2-202ENST00000570641 SRP19P09132 144 aaKnown RBP13.63□□□□□ -0.23
SPNS2-202ENST00000570641 ID1P41134 155 aa13.63□□□□□ -0.23
SPNS2-202ENST00000570641 EXOC3-AS1Q8N2X6 119 aa13.63□□□□□ -0.23
SPNS2-202ENST00000570641 GBGT1Q8N5D6 347 aa13.63□□□□□ -0.23
SPNS2-202ENST00000570641 OR2K2Q8NGT1 345 aa13.63□□□□□ -0.23
SPNS2-202ENST00000570641 TENM1Q9UKZ4 2725 aa13.62□□□□□ -0.23
SPNS2-202ENST00000570641 TMEM250H0YL14 139 aa13.62□□□□□ -0.23
SPNS2-202ENST00000570641 SOCS3O14543 225 aa13.62□□□□□ -0.23
SPNS2-202ENST00000570641 CD33P20138 364 aa13.62□□□□□ -0.23
SPNS2-202ENST00000570641 CSN1S1P47710 185 aa13.62□□□□□ -0.23
SPNS2-202ENST00000570641 CD300EQ496F6 205 aaPredicted RBP13.62□□□□□ -0.23
SPNS2-202ENST00000570641 C9orf66Q5T8R8 295 aa13.62□□□□□ -0.23
SPNS2-202ENST00000570641 TMEM61Q8N0U2 210 aa13.62□□□□□ -0.23
SPNS2-202ENST00000570641 ARL6IP6Q8N6S5 226 aa13.62□□□□□ -0.23
SPNS2-202ENST00000570641 MRPL53Q96EL3 112 aaKnown RBP13.62□□□□□ -0.23
SPNS2-202ENST00000570641 MCRIP2Q9BUT9 160 aaKnown RBP13.62□□□□□ -0.23
SPNS2-202ENST00000570641 SLC35B3Q9H1N7 401 aa13.62□□□□□ -0.23
SPNS2-202ENST00000570641 TRAV8-2A0A0B4J237 113 aa13.61□□□□□ -0.23
SPNS2-202ENST00000570641 C9JQL5 133 aa13.61□□□□□ -0.23
SPNS2-202ENST00000570641 K7EQG2 157 aa13.61□□□□□ -0.23
SPNS2-202ENST00000570641 IGLV1-51P01701 117 aa13.61□□□□□ -0.23
SPNS2-202ENST00000570641 INSL3P51460 131 aa13.61□□□□□ -0.23
SPNS2-202ENST00000570641 WFDC3Q8IUB2 231 aa13.61□□□□□ -0.23
SPNS2-202ENST00000570641 DCANP1Q8TF63 244 aa13.61□□□□□ -0.23
SPNS2-202ENST00000570641 HIST1H2BAQ96A08 127 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms