RNA–Protein interactions for RNA: ENST00000569440.5

BBS4-218, Transcript of Bardet-Biedl syndrome 4, human

TSL 4

Gene BBS4, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BBS4-218	ENST00000569440	SUMO4	Q6EEV6	95 aa		3.91	□□□□□ -1.78
BBS4-218	ENST00000569440	HOGA1	Q86XE5	327 aa		3.91	□□□□□ -1.78
BBS4-218	ENST00000569440	NANOGP1	Q8N7R0	232 aa		3.91	□□□□□ -1.78
BBS4-218	ENST00000569440	ZNF738	Q8NE65	137 aa		3.91	□□□□□ -1.78
BBS4-218	ENST00000569440	BEST4	Q8NFU0	473 aa		3.91	□□□□□ -1.78
BBS4-218	ENST00000569440	RNASEH2C	Q8TDP1	164 aa	Known RBP	3.91	□□□□□ -1.78
BBS4-218	ENST00000569440	TXNDC17	Q9BRA2	123 aa		3.91	□□□□□ -1.78
BBS4-218	ENST00000569440	ATG5	Q9H1Y0	275 aa		3.91	□□□□□ -1.78
BBS4-218	ENST00000569440	KLF12	Q9Y4X4	402 aa		3.91	□□□□□ -1.78
BBS4-218	ENST00000569440	COX11	Q9Y6N1	276 aa		3.91	□□□□□ -1.78
BBS4-218	ENST00000569440	TRAV8-6	A0A0B4J262	113 aa		3.9	□□□□□ -1.79
BBS4-218	ENST00000569440		H0YIZ8	118 aa		3.9	□□□□□ -1.79
BBS4-218	ENST00000569440	HTR2B	P41595	481 aa		3.9	□□□□□ -1.79
BBS4-218	ENST00000569440	GNG2	P59768	71 aa		3.9	□□□□□ -1.79
BBS4-218	ENST00000569440	ZNF90	Q03938	601 aa		3.9	□□□□□ -1.79
BBS4-218	ENST00000569440	C2orf83	Q53S99	150 aa		3.9	□□□□□ -1.79
BBS4-218	ENST00000569440	IDNK	Q5T6J7	187 aa		3.9	□□□□□ -1.79
BBS4-218	ENST00000569440	REG3G	Q6UW15	175 aa		3.9	□□□□□ -1.79
BBS4-218	ENST00000569440	DHRS11	Q6UWP2	260 aa		3.9	□□□□□ -1.79
BBS4-218	ENST00000569440	ZNF680	Q8NEM1	530 aa		3.9	□□□□□ -1.79
BBS4-218	ENST00000569440	OR4D5	Q8NGN0	318 aa		3.9	□□□□□ -1.79
BBS4-218	ENST00000569440	ATP6V0E2	Q8NHE4	81 aa		3.9	□□□□□ -1.79
BBS4-218	ENST00000569440	TMEM170A	Q8WVE7	144 aa		3.9	□□□□□ -1.79
BBS4-218	ENST00000569440	PCNP	Q8WW12	178 aa	Known RBP	3.9	□□□□□ -1.79
BBS4-218	ENST00000569440	MRGPRF	Q96AM1	343 aa		3.9	□□□□□ -1.79
BBS4-218	ENST00000569440	ACY3	Q96HD9	319 aa		3.9	□□□□□ -1.79
BBS4-218	ENST00000569440	PYGO2	Q9BRQ0	406 aa		3.9	□□□□□ -1.79
BBS4-218	ENST00000569440	SLC25A31	Q9H0C2	315 aa		3.9	□□□□□ -1.79
BBS4-218	ENST00000569440	KIF25-AS1	Q9Y6Z4	181 aa		3.9	□□□□□ -1.79
BBS4-218	ENST00000569440	IGKV1D-37	A0A075B6S9	117 aa		3.89	□□□□□ -1.79
BBS4-218	ENST00000569440	SNRPGP15	A8MWD9	76 aa		3.89	□□□□□ -1.79
BBS4-218	ENST00000569440	ARL6IP5	O75915	188 aa		3.89	□□□□□ -1.79
BBS4-218	ENST00000569440	IGKV1-5	P01602	117 aa		3.89	□□□□□ -1.79
BBS4-218	ENST00000569440	HSMCR30	P0CW71	290 aa		3.89	□□□□□ -1.79
BBS4-218	ENST00000569440	CXCL3	P19876	107 aa		3.89	□□□□□ -1.79
BBS4-218	ENST00000569440	PSMA1	P25786	263 aa	Known RBP	3.89	□□□□□ -1.79
BBS4-218	ENST00000569440	TCL1A	P56279	114 aa		3.89	□□□□□ -1.79
BBS4-218	ENST00000569440	LYZ	P61626	148 aa		3.89	□□□□□ -1.79
BBS4-218	ENST00000569440	ANXA2R	Q3ZCQ2	193 aa		3.89	□□□□□ -1.79
BBS4-218	ENST00000569440	ETFRF1	Q6IPR1	90 aa		3.89	□□□□□ -1.79
BBS4-218	ENST00000569440	SPINK6	Q6UWN8	80 aa		3.89	□□□□□ -1.79
BBS4-218	ENST00000569440	SDIM1	Q6ZPB5	146 aa		3.89	□□□□□ -1.79
BBS4-218	ENST00000569440	SH2D6	Q7Z4S9	175 aa		3.89	□□□□□ -1.79
BBS4-218	ENST00000569440	OR1B1	Q8NGR6	318 aa		3.89	□□□□□ -1.79
BBS4-218	ENST00000569440	PARD6G	Q9BYG4	376 aa	Predicted RBP	3.89	□□□□□ -1.79
BBS4-218	ENST00000569440	RRP15	Q9Y3B9	282 aa	Known RBP	3.89	□□□□□ -1.79
BBS4-218	ENST00000569440	MUC17	Q685J3	4493 aa		3.88	□□□□□ -1.79
BBS4-218	ENST00000569440	TRAV8-1	A0A0A6YYK1	113 aa		3.88	□□□□□ -1.79
BBS4-218	ENST00000569440	TRAV12-3	A0A0B4J271	114 aa		3.88	□□□□□ -1.79
BBS4-218	ENST00000569440	TRGV4	A0A0C4DH28	118 aa		3.88	□□□□□ -1.79
BBS4-218	ENST00000569440	IFITM5	A6NNB3	132 aa		3.88	□□□□□ -1.79
BBS4-218	ENST00000569440	GPR31	O00270	319 aa		3.88	□□□□□ -1.79
BBS4-218	ENST00000569440	PHOX2A	O14813	284 aa		3.88	□□□□□ -1.79
BBS4-218	ENST00000569440	MYL12B	O14950	172 aa		3.88	□□□□□ -1.79
BBS4-218	ENST00000569440	CBX5	P45973	191 aa		3.88	□□□□□ -1.79
BBS4-218	ENST00000569440	HERV-K104	P61576	105 aa		3.88	□□□□□ -1.79
BBS4-218	ENST00000569440	FOXI1	Q12951	378 aa		3.88	□□□□□ -1.79
BBS4-218	ENST00000569440	SRSF9	Q13242	221 aa	Known RBP eCLIP	3.88	□□□□□ -1.79
BBS4-218	ENST00000569440	KLF9	Q13886	244 aa	Predicted RBP	3.88	□□□□□ -1.79
BBS4-218	ENST00000569440	AARD	Q4LEZ3	155 aa		3.88	□□□□□ -1.79
BBS4-218	ENST00000569440	OR10J3	Q5JRS4	329 aa		3.88	□□□□□ -1.79
BBS4-218	ENST00000569440	C9orf163	Q8N9P6	203 aa		3.88	□□□□□ -1.79
BBS4-218	ENST00000569440	OR5AP2	Q8NGF4	316 aa		3.88	□□□□□ -1.79
BBS4-218	ENST00000569440	ZNF431	Q8TF32	576 aa	Predicted RBP	3.88	□□□□□ -1.79
BBS4-218	ENST00000569440	GPR82	Q96P67	336 aa		3.88	□□□□□ -1.79
BBS4-218	ENST00000569440	CCDC90B	Q9GZT6	254 aa		3.88	□□□□□ -1.79
BBS4-218	ENST00000569440	ENY2	Q9NPA8	101 aa		3.88	□□□□□ -1.79
BBS4-218	ENST00000569440	MRPL16	Q9NX20	251 aa	Known RBP	3.88	□□□□□ -1.79
BBS4-218	ENST00000569440	LOC100131303	A0A0U1RQF7	123 aa		3.87	□□□□□ -1.79
BBS4-218	ENST00000569440	CASQ2	O14958	399 aa	Predicted RBP	3.87	□□□□□ -1.79
BBS4-218	ENST00000569440	GYG2	O15488	501 aa		3.87	□□□□□ -1.79
BBS4-218	ENST00000569440	HRH1	P35367	487 aa		3.87	□□□□□ -1.79
BBS4-218	ENST00000569440	PPT1	P50897	306 aa		3.87	□□□□□ -1.79
BBS4-218	ENST00000569440	TAS2R20	P59543	309 aa		3.87	□□□□□ -1.79
BBS4-218	ENST00000569440	SPCS3	P61009	180 aa		3.87	□□□□□ -1.79
BBS4-218	ENST00000569440	PRR3	P79522	188 aa	Known RBP	3.87	□□□□□ -1.79
BBS4-218	ENST00000569440	DNAL1	Q4LDG9	190 aa		3.87	□□□□□ -1.79
BBS4-218	ENST00000569440	IBA57	Q5T440	356 aa	Known RBP	3.87	□□□□□ -1.79
BBS4-218	ENST00000569440	TBC1D26	Q86UD7	250 aa		3.87	□□□□□ -1.79
BBS4-218	ENST00000569440	NOXA1	Q86UR1	476 aa		3.87	□□□□□ -1.79
BBS4-218	ENST00000569440	ARRDC1	Q8N5I2	433 aa		3.87	□□□□□ -1.79
BBS4-218	ENST00000569440	RPUSD4	Q96CM3	377 aa	Known RBP	3.87	□□□□□ -1.79
BBS4-218	ENST00000569440	ZNF479	Q96JC4	524 aa		3.87	□□□□□ -1.79
BBS4-218	ENST00000569440	ZNF2	Q9BSG1	426 aa	Predicted RBP	3.87	□□□□□ -1.79
BBS4-218	ENST00000569440	PDCD10	Q9BUL8	212 aa		3.87	□□□□□ -1.79
BBS4-218	ENST00000569440	SLC25A22	Q9H936	323 aa		3.87	□□□□□ -1.79
BBS4-218	ENST00000569440	LSM2	Q9Y333	95 aa	Known RBP	3.87	□□□□□ -1.79
BBS4-218	ENST00000569440		A0A087WYN8	130 aa		3.86	□□□□□ -1.79
BBS4-218	ENST00000569440	ZFP92	A6NM28	416 aa		3.86	□□□□□ -1.79
BBS4-218	ENST00000569440	SFTA3	P0C7M3	94 aa		3.86	□□□□□ -1.79
BBS4-218	ENST00000569440	PRR4	Q16378	134 aa		3.86	□□□□□ -1.79
BBS4-218	ENST00000569440	C14orf177	Q52M58	125 aa		3.86	□□□□□ -1.79
BBS4-218	ENST00000569440	PHLDA2	Q53GA4	152 aa		3.86	□□□□□ -1.79
BBS4-218	ENST00000569440	STEAP1B	Q6NZ63	245 aa		3.86	□□□□□ -1.79
BBS4-218	ENST00000569440	DPPA3	Q6W0C5	159 aa		3.86	□□□□□ -1.79
BBS4-218	ENST00000569440	DAZ4	Q86SG3	579 aa	Known RBP	3.86	□□□□□ -1.79
BBS4-218	ENST00000569440	EIF4E3	Q8N5X7	224 aa	Known RBP	3.86	□□□□□ -1.79
BBS4-218	ENST00000569440	OR10G4	Q8NGN3	311 aa		3.86	□□□□□ -1.79
BBS4-218	ENST00000569440	RMI2	Q96E14	147 aa		3.86	□□□□□ -1.79
BBS4-218	ENST00000569440	RNF185	Q96GF1	192 aa		3.86	□□□□□ -1.79

Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms