RNA–Protein interactions for RNA: ENST00000569225.5

CHD9-219, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 2

Gene CHD9, Length 1,862 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-219ENST00000569225 HIST1H1EP10412 219 aaKnown RBP6.78□□□□□ -1.32
CHD9-219ENST00000569225 SPP1P10451 314 aa6.78□□□□□ -1.32
CHD9-219ENST00000569225 CD300CQ08708 224 aa6.78□□□□□ -1.32
CHD9-219ENST00000569225 LGALSLQ3ZCW2 172 aaPredicted RBP6.78□□□□□ -1.32
CHD9-219ENST00000569225 SPATA31B1PQ5VZV4 182 aa6.78□□□□□ -1.32
CHD9-219ENST00000569225 FAM122CQ6P4D5 195 aa6.78□□□□□ -1.32
CHD9-219ENST00000569225 BAP18Q8IXM2 172 aa6.78□□□□□ -1.32
CHD9-219ENST00000569225 FAM24BQ8N5W8 94 aa6.78□□□□□ -1.32
CHD9-219ENST00000569225 PAXXQ9BUH6 204 aa6.78□□□□□ -1.32
CHD9-219ENST00000569225 SLC25A2Q9BXI2 301 aa6.78□□□□□ -1.32
CHD9-219ENST00000569225 ACTR3CQ9C0K3 210 aaPredicted RBP6.78□□□□□ -1.32
CHD9-219ENST00000569225 WFDC10AQ9H1F0 79 aa6.78□□□□□ -1.32
CHD9-219ENST00000569225 OR51M1Q9H341 326 aa6.78□□□□□ -1.32
CHD9-219ENST00000569225 RFNGQ9Y644 331 aa6.78□□□□□ -1.32
CHD9-219ENST00000569225 ZNF253O75346 499 aa6.77□□□□□ -1.33
CHD9-219ENST00000569225 FRMD6-AS1P0C7T7 363 aa6.77□□□□□ -1.33
CHD9-219ENST00000569225 SEC11BP0C7V7 166 aa6.77□□□□□ -1.33
CHD9-219ENST00000569225 CDC34P49427 236 aaPredicted RBP6.77□□□□□ -1.33
CHD9-219ENST00000569225 PDE6HQ13956 83 aa6.77□□□□□ -1.33
CHD9-219ENST00000569225 APRG1Q8IVJ8 170 aa6.77□□□□□ -1.33
CHD9-219ENST00000569225 C9orf62Q8N4C0 152 aa6.77□□□□□ -1.33
CHD9-219ENST00000569225 STOML3Q8TAV4 291 aa6.77□□□□□ -1.33
CHD9-219ENST00000569225 FAM167A-AS1Q96KT0 104 aa6.77□□□□□ -1.33
CHD9-219ENST00000569225 RPRMQ9NS64 109 aa6.77□□□□□ -1.33
CHD9-219ENST00000569225 DNAH3Q8TD57 4116 aa6.77□□□□□ -1.33
CHD9-219ENST00000569225 LOC102724200A0A096LPH7 203 aaPredicted RBP6.77□□□□□ -1.33
CHD9-219ENST00000569225 UMAD1C9J7I0 102 aa6.77□□□□□ -1.33
CHD9-219ENST00000569225 UBE2L3P68036 154 aaKnown RBP6.77□□□□□ -1.33
CHD9-219ENST00000569225 PSG9Q00887 426 aa6.77□□□□□ -1.33
CHD9-219ENST00000569225 PQLC2Q6ZP29 291 aa6.77□□□□□ -1.33
CHD9-219ENST00000569225 SLC51BQ86UW2 128 aa6.77□□□□□ -1.33
CHD9-219ENST00000569225 STHQ8IWL8 128 aa6.77□□□□□ -1.33
CHD9-219ENST00000569225 RNF141Q8WVD5 230 aa6.77□□□□□ -1.33
CHD9-219ENST00000569225 B9D2Q9BPU9 175 aa6.77□□□□□ -1.33
CHD9-219ENST00000569225 TRBV19A0A075B6N1 114 aa6.76□□□□□ -1.33
CHD9-219ENST00000569225 H3BQ15 152 aa6.76□□□□□ -1.33
CHD9-219ENST00000569225 PYYP10082 97 aa6.76□□□□□ -1.33
CHD9-219ENST00000569225 APOC4P55056 127 aa6.76□□□□□ -1.33
CHD9-219ENST00000569225 ACTL10Q5JWF8 245 aa6.76□□□□□ -1.33
CHD9-219ENST00000569225 EBLN2Q6P2I7 272 aa6.76□□□□□ -1.33
CHD9-219ENST00000569225 FOXI2Q6ZQN5 318 aa6.76□□□□□ -1.33
CHD9-219ENST00000569225 RPP25LQ8N5L8 163 aaKnown RBP6.76□□□□□ -1.33
CHD9-219ENST00000569225 ZNF738Q8NE65 137 aa6.76□□□□□ -1.33
CHD9-219ENST00000569225 RAB24Q969Q5 203 aa6.76□□□□□ -1.33
CHD9-219ENST00000569225 C17orf77Q96MU5 243 aa6.76□□□□□ -1.33
CHD9-219ENST00000569225 AAMDCQ9H7C9 122 aa6.76□□□□□ -1.33
CHD9-219ENST00000569225 ZNF331Q9NQX6 463 aaPredicted RBP6.76□□□□□ -1.33
CHD9-219ENST00000569225 ZNF586Q9NXT0 402 aa6.76□□□□□ -1.33
CHD9-219ENST00000569225 TRAV8-2A0A0B4J237 113 aa6.75□□□□□ -1.33
CHD9-219ENST00000569225 CTXND1A0A1B0GTU2 59 aa6.75□□□□□ -1.33
CHD9-219ENST00000569225 OR10J4P0C629 311 aa6.75□□□□□ -1.33
CHD9-219ENST00000569225 NBEAP1P0C6P0 100 aa6.75□□□□□ -1.33
CHD9-219ENST00000569225 DPPA3Q6W0C5 159 aa6.75□□□□□ -1.33
CHD9-219ENST00000569225 BLNKQ8WV28 456 aa6.75□□□□□ -1.33
CHD9-219ENST00000569225 FXYD5Q96DB9 178 aa6.75□□□□□ -1.33
CHD9-219ENST00000569225 KIR2DL5BA0A0G2JN68 375 aa6.75□□□□□ -1.33
CHD9-219ENST00000569225 KIR2DL5BA0A0G2JPC4 375 aa6.75□□□□□ -1.33
CHD9-219ENST00000569225 RBMY1BA6NDE4 496 aaKnown RBP6.75□□□□□ -1.33
CHD9-219ENST00000569225 RBMY1EA6NEQ0 496 aaKnown RBP6.75□□□□□ -1.33
CHD9-219ENST00000569225 KNCNA6PVL3 124 aa6.75□□□□□ -1.33
CHD9-219ENST00000569225 H3BTX0 84 aa6.75□□□□□ -1.33
CHD9-219ENST00000569225 CXorf1O96002 111 aa6.75□□□□□ -1.33
CHD9-219ENST00000569225 SNRPCP09234 159 aaKnown RBP6.75□□□□□ -1.33
CHD9-219ENST00000569225 RBMY1DP0C7P1 496 aaKnown RBP6.75□□□□□ -1.33
CHD9-219ENST00000569225 STAG3L2P0CL84 134 aa6.75□□□□□ -1.33
CHD9-219ENST00000569225 STAG3L3P0CL85 134 aa6.75□□□□□ -1.33
CHD9-219ENST00000569225 ZNF124Q15973 351 aa6.75□□□□□ -1.33
CHD9-219ENST00000569225 PSG3Q16557 428 aa6.75□□□□□ -1.33
CHD9-219ENST00000569225 KIR2DL5AQ8N109 375 aa6.75□□□□□ -1.33
CHD9-219ENST00000569225 RNF182Q8N6D2 247 aa6.75□□□□□ -1.33
CHD9-219ENST00000569225 KIR2DL5BQ8NHK3 375 aa6.75□□□□□ -1.33
CHD9-219ENST00000569225 TMED6Q8WW62 240 aa6.75□□□□□ -1.33
CHD9-219ENST00000569225 SAT2Q96F10 170 aaPredicted RBP6.75□□□□□ -1.33
CHD9-219ENST00000569225 CITED4Q96RK1 184 aa6.75□□□□□ -1.33
CHD9-219ENST00000569225 SAV1Q9H4B6 383 aaPredicted RBP6.75□□□□□ -1.33
CHD9-219ENST00000569225 PRELID1Q9Y255 219 aa6.75□□□□□ -1.33
CHD9-219ENST00000569225 SLC17A3O00476 420 aa6.74□□□□□ -1.33
CHD9-219ENST00000569225 UBE2CO00762 179 aa6.74□□□□□ -1.33
CHD9-219ENST00000569225 HMGB3O15347 200 aaKnown RBP6.74□□□□□ -1.33
CHD9-219ENST00000569225 DUSP14O95147 198 aaKnown RBP6.74□□□□□ -1.33
CHD9-219ENST00000569225 NHLRC4P0CG21 123 aaPredicted RBP6.74□□□□□ -1.33
CHD9-219ENST00000569225 ARL14EPLP0DKL9 152 aa6.74□□□□□ -1.33
CHD9-219ENST00000569225 HLA-DRB4P13762 266 aa6.74□□□□□ -1.33
CHD9-219ENST00000569225 RPL35AP18077 110 aaKnown RBP6.74□□□□□ -1.33
CHD9-219ENST00000569225 RAB5CP51148 216 aa6.74□□□□□ -1.33
CHD9-219ENST00000569225 NUTF2P61970 127 aaKnown RBP6.74□□□□□ -1.33
CHD9-219ENST00000569225 IGFL4Q6B9Z1 124 aa6.74□□□□□ -1.33
CHD9-219ENST00000569225 MORN3Q6PF18 240 aaPredicted RBP6.74□□□□□ -1.33
CHD9-219ENST00000569225 LINC00322Q6ZN03 302 aaPredicted RBP6.74□□□□□ -1.33
CHD9-219ENST00000569225 LYPD1Q8N2G4 141 aa6.74□□□□□ -1.33
CHD9-219ENST00000569225 RPUSD4Q96CM3 377 aaKnown RBP6.74□□□□□ -1.33
CHD9-219ENST00000569225 MRPL53Q96EL3 112 aaKnown RBP6.74□□□□□ -1.33
CHD9-219ENST00000569225 C20orf173Q96LM9 149 aa6.74□□□□□ -1.33
CHD9-219ENST00000569225 TMEM167BQ9NRX6 74 aa6.74□□□□□ -1.33
CHD9-219ENST00000569225 HLA-DRB4X5D2U9 266 aa6.74□□□□□ -1.33
CHD9-219ENST00000569225 NKX2-5P52952 324 aaPredicted RBP6.73□□□□□ -1.33
CHD9-219ENST00000569225 HAGHQ16775 308 aa6.73□□□□□ -1.33
CHD9-219ENST00000569225 FAM74A1Q5RGS3 127 aa6.73□□□□□ -1.33
CHD9-219ENST00000569225 TRPT1Q86TN4 253 aaKnown RBP6.73□□□□□ -1.33
CHD9-219ENST00000569225 FAM213BQ8TBF2 198 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms