RNA–Protein interactions for RNA: ENST00000569066.2

UBR1-208, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 1 (best)

Gene UBR1, Length 2,250 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-208ENST00000569066 MCEEQ96PE7 176 aa3.51□□□□□ -1.85
UBR1-208ENST00000569066 COMMD5Q9GZQ3 224 aa3.51□□□□□ -1.85
UBR1-208ENST00000569066 BANF2Q9H503 90 aa3.51□□□□□ -1.85
UBR1-208ENST00000569066 BCL2L10Q9HD36 194 aa3.51□□□□□ -1.85
UBR1-208ENST00000569066 CISHQ9NSE2 258 aa3.51□□□□□ -1.85
UBR1-208ENST00000569066 TRAPPC1Q9Y5R8 145 aa3.51□□□□□ -1.85
UBR1-208ENST00000569066 KIAA1549Q9HCM3 1950 aa3.51□□□□□ -1.85
UBR1-208ENST00000569066 SLIT1O75093 1534 aa3.51□□□□□ -1.85
UBR1-208ENST00000569066 BORCS7-ASMTA0A0B4J1R7 106 aa3.51□□□□□ -1.85
UBR1-208ENST00000569066 FAM236AA0A1B0GUQ0 79 aa3.51□□□□□ -1.85
UBR1-208ENST00000569066 FAM236BA0A1B0GV22 79 aa3.51□□□□□ -1.85
UBR1-208ENST00000569066 OOSP1A8MZH6 123 aa3.51□□□□□ -1.85
UBR1-208ENST00000569066 PITX3O75364 302 aa3.51□□□□□ -1.85
UBR1-208ENST00000569066 DBIP07108 87 aaKnown RBP3.51□□□□□ -1.85
UBR1-208ENST00000569066 SEC11BP0C7V7 166 aa3.51□□□□□ -1.85
UBR1-208ENST00000569066 CRYBB3P26998 211 aa3.51□□□□□ -1.85
UBR1-208ENST00000569066 FAUP35544 74 aaKnown RBP3.51□□□□□ -1.85
UBR1-208ENST00000569066 PPP1CAP62136 330 aa3.51□□□□□ -1.85
UBR1-208ENST00000569066 SEC11AP67812 179 aa3.51□□□□□ -1.85
UBR1-208ENST00000569066 RPL18AQ02543 176 aaKnown RBP3.51□□□□□ -1.85
UBR1-208ENST00000569066 PMCHL1Q16048 86 aa3.51□□□□□ -1.85
UBR1-208ENST00000569066 ZNF791Q3KP31 576 aaPredicted RBP3.51□□□□□ -1.85
UBR1-208ENST00000569066 SMIM5Q71RC9 77 aa3.51□□□□□ -1.85
UBR1-208ENST00000569066 OR2T10Q8NGZ9 312 aa3.51□□□□□ -1.85
UBR1-208ENST00000569066 STAG3L4Q8TBR4 150 aa3.51□□□□□ -1.85
UBR1-208ENST00000569066 C18orf32Q8TCD1 76 aa3.51□□□□□ -1.85
UBR1-208ENST00000569066 MBD3L1Q8WWY6 194 aa3.51□□□□□ -1.85
UBR1-208ENST00000569066 NMES1Q9C002 83 aa3.51□□□□□ -1.85
UBR1-208ENST00000569066 TMEM222Q9H0R3 208 aa3.51□□□□□ -1.85
UBR1-208ENST00000569066 C21orf62Q9NYP8 219 aa3.51□□□□□ -1.85
UBR1-208ENST00000569066 ALS2Q96Q42 1657 aa3.51□□□□□ -1.85
UBR1-208ENST00000569066 NHSL1Q5SYE7 1610 aa3.5□□□□□ -1.85
UBR1-208ENST00000569066 A0A0A6YYD5 115 aa3.5□□□□□ -1.85
UBR1-208ENST00000569066 MEIS3P1A6NDR6 274 aa3.5□□□□□ -1.85
UBR1-208ENST00000569066 IGLV3-25P01717 112 aa3.5□□□□□ -1.85
UBR1-208ENST00000569066 TRBV12-3P01733 135 aa3.5□□□□□ -1.85
UBR1-208ENST00000569066 PRH1P02810 166 aa3.5□□□□□ -1.85
UBR1-208ENST00000569066 CD3DP04234 171 aa3.5□□□□□ -1.85
UBR1-208ENST00000569066 FABP2P12104 132 aa3.5□□□□□ -1.85
UBR1-208ENST00000569066 STC1P52823 247 aa3.5□□□□□ -1.85
UBR1-208ENST00000569066 LCN6P62502 163 aa3.5□□□□□ -1.85
UBR1-208ENST00000569066 C1orf195Q5TG92 126 aa3.5□□□□□ -1.85
UBR1-208ENST00000569066 Q5W150 140 aa3.5□□□□□ -1.85
UBR1-208ENST00000569066 DRAM1Q8N682 238 aa3.5□□□□□ -1.85
UBR1-208ENST00000569066 KRTCAP2Q8N6L1 136 aa3.5□□□□□ -1.85
UBR1-208ENST00000569066 PPTC7Q8NI37 304 aa3.5□□□□□ -1.85
UBR1-208ENST00000569066 RPS4Y2Q8TD47 263 aa3.5□□□□□ -1.85
UBR1-208ENST00000569066 DDIT4LQ96D03 193 aa3.5□□□□□ -1.85
UBR1-208ENST00000569066 PRELID3AQ96N28 172 aa3.5□□□□□ -1.85
UBR1-208ENST00000569066 SH3BGRL3Q9H299 93 aa3.5□□□□□ -1.85
UBR1-208ENST00000569066 FAM206AQ9NX38 181 aa3.5□□□□□ -1.85
UBR1-208ENST00000569066 KLK5Q9Y337 293 aaPredicted RBP3.5□□□□□ -1.85
UBR1-208ENST00000569066 IER3IP1Q9Y5U9 82 aa3.5□□□□□ -1.85
UBR1-208ENST00000569066 TMEM14AQ9Y6G1 99 aa3.5□□□□□ -1.85
UBR1-208ENST00000569066 MCM3APO60318 1980 aa3.5□□□□□ -1.85
UBR1-208ENST00000569066 NRAPQ86VF7 1730 aa3.5□□□□□ -1.85
UBR1-208ENST00000569066 COL14A1Q05707 1796 aaKnown RBP3.5□□□□□ -1.85
UBR1-208ENST00000569066 ERCC6L2Q5T890 1561 aa3.5□□□□□ -1.85
UBR1-208ENST00000569066 ARRDC5A6NEK1 342 aa3.5□□□□□ -1.85
UBR1-208ENST00000569066 FAM24AA6NFZ4 105 aa3.5□□□□□ -1.85
UBR1-208ENST00000569066 C17orf112F2Z3M2 114 aa3.5□□□□□ -1.85
UBR1-208ENST00000569066 TMEM250H0YL14 139 aa3.5□□□□□ -1.85
UBR1-208ENST00000569066 CXorf1O96002 111 aa3.5□□□□□ -1.85
UBR1-208ENST00000569066 CA2P00918 260 aa3.5□□□□□ -1.85
UBR1-208ENST00000569066 SLC25A5P05141 298 aaKnown RBP3.5□□□□□ -1.85
UBR1-208ENST00000569066 MRPL3P09001 348 aaKnown RBP3.5□□□□□ -1.85
UBR1-208ENST00000569066 CDK2P24941 298 aa3.5□□□□□ -1.85
UBR1-208ENST00000569066 IL3RAP26951 378 aa3.5□□□□□ -1.85
UBR1-208ENST00000569066 SNRPFP62306 86 aaKnown RBP3.5□□□□□ -1.85
UBR1-208ENST00000569066 HERVK_113P63121 156 aa3.5□□□□□ -1.85
UBR1-208ENST00000569066 HLA-DRB5Q30154 266 aa3.5□□□□□ -1.85
UBR1-208ENST00000569066 RNASE13Q5GAN3 156 aaKnown RBP3.5□□□□□ -1.85
UBR1-208ENST00000569066 TTC32Q5I0X7 151 aa3.5□□□□□ -1.85
UBR1-208ENST00000569066 SLC25A34Q6PIV7 304 aa3.5□□□□□ -1.85
UBR1-208ENST00000569066 TCF23Q7RTU1 214 aa3.5□□□□□ -1.85
UBR1-208ENST00000569066 ZNF550Q7Z398 422 aa3.5□□□□□ -1.85
UBR1-208ENST00000569066 TMEM229BQ8NBD8 167 aa3.5□□□□□ -1.85
UBR1-208ENST00000569066 FAM213BQ8TBF2 198 aa3.5□□□□□ -1.85
UBR1-208ENST00000569066 RAB37Q96AX2 223 aa3.5□□□□□ -1.85
UBR1-208ENST00000569066 SLC25A44Q96H78 314 aaPredicted RBP3.5□□□□□ -1.85
UBR1-208ENST00000569066 CMC2Q9NRP2 79 aa3.5□□□□□ -1.85
UBR1-208ENST00000569066 LRRC37A3O60309 1634 aa3.5□□□□□ -1.85
UBR1-208ENST00000569066 BPY2O14599 106 aa3.49□□□□□ -1.85
UBR1-208ENST00000569066 OR2H2O95918 312 aa3.49□□□□□ -1.85
UBR1-208ENST00000569066 HLA-DRB1P01911 266 aa3.49□□□□□ -1.85
UBR1-208ENST00000569066 LAMTOR4Q0VGL1 99 aa3.49□□□□□ -1.85
UBR1-208ENST00000569066 SP6Q3SY56 376 aa3.49□□□□□ -1.85
UBR1-208ENST00000569066 C2orf91Q6ZV80 131 aa3.49□□□□□ -1.85
UBR1-208ENST00000569066 ZCCHC24Q8N2G6 241 aaKnown RBP3.49□□□□□ -1.85
UBR1-208ENST00000569066 OR8S1Q8NH09 359 aa3.49□□□□□ -1.85
UBR1-208ENST00000569066 CLDND2Q8NHS1 167 aa3.49□□□□□ -1.85
UBR1-208ENST00000569066 SLC37A2Q8TED4 501 aa3.49□□□□□ -1.85
UBR1-208ENST00000569066 PRO0461Q9UI25 63 aa3.49□□□□□ -1.85
UBR1-208ENST00000569066 NLRC5Q86WI3 1866 aa3.49□□□□□ -1.85
UBR1-208ENST00000569066 PLXNA1Q9UIW2 1896 aa3.49□□□□□ -1.85
UBR1-208ENST00000569066 KIDINS220Q9ULH0 1771 aa3.49□□□□□ -1.85
UBR1-208ENST00000569066 SLX4Q8IY92 1834 aa3.49□□□□□ -1.85
UBR1-208ENST00000569066 SHROOM3Q8TF72 1996 aa3.49□□□□□ -1.85
UBR1-208ENST00000569066 TRAV4A0A0B4J268 109 aa3.49□□□□□ -1.85
UBR1-208ENST00000569066 ZNF736B4DX44 427 aaPredicted RBP3.49□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms