RNA–Protein interactions for RNA: ENST00000568494.1

ZNRF1-208, Transcript of zinc and ring finger 1, human

TSL 2

Gene ZNRF1, Length 2,046 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ZNRF1-208	ENST00000568494	TCL1A	P56279	114 aa		10.34	□□□□□ -0.75
ZNRF1-208	ENST00000568494	LY6E	Q16553	131 aa		10.34	□□□□□ -0.75
ZNRF1-208	ENST00000568494	KRTAP1-3	Q8IUG1	177 aa		10.34	□□□□□ -0.75
ZNRF1-208	ENST00000568494	LRRC75A-AS1	Q8N1F1	130 aa		10.34	□□□□□ -0.75
ZNRF1-208	ENST00000568494	NUDT10	Q8NFP7	164 aa		10.34	□□□□□ -0.75
ZNRF1-208	ENST00000568494	NUDT11	Q96G61	164 aa		10.34	□□□□□ -0.75
ZNRF1-208	ENST00000568494	ZNF414	Q96IQ9	312 aa		10.34	□□□□□ -0.75
ZNRF1-208	ENST00000568494	MS4A10	Q96PG2	267 aa		10.34	□□□□□ -0.75
ZNRF1-208	ENST00000568494	SMIM27	A0A1W2PRY6	76 aa		10.34	□□□□□ -0.75
ZNRF1-208	ENST00000568494	NUPR1	O60356	82 aa		10.34	□□□□□ -0.75
ZNRF1-208	ENST00000568494	CA1	P00915	261 aa	Predicted RBP	10.34	□□□□□ -0.75
ZNRF1-208	ENST00000568494	GPR183	P32249	361 aa		10.34	□□□□□ -0.75
ZNRF1-208	ENST00000568494	PRR27	Q6MZM9	219 aa		10.34	□□□□□ -0.75
ZNRF1-208	ENST00000568494	FAM231D	Q6ZW35	169 aa		10.34	□□□□□ -0.75
ZNRF1-208	ENST00000568494	CMTM2	Q8TAZ6	248 aa		10.34	□□□□□ -0.75
ZNRF1-208	ENST00000568494	FMC1	Q96HJ9	113 aa		10.34	□□□□□ -0.75
ZNRF1-208	ENST00000568494	GPR82	Q96P67	336 aa		10.34	□□□□□ -0.75
ZNRF1-208	ENST00000568494	ACAN	P16112	2415 aa		10.34	□□□□□ -0.75
ZNRF1-208	ENST00000568494	MAST4	O15021	2626 aa		10.33	□□□□□ -0.76
ZNRF1-208	ENST00000568494	IGHV3-35	A0A0C4DH35	117 aa		10.33	□□□□□ -0.76
ZNRF1-208	ENST00000568494	GRIFIN	A4D1Z8	144 aa		10.33	□□□□□ -0.76
ZNRF1-208	ENST00000568494	SPINK4	O60575	86 aa		10.33	□□□□□ -0.76
ZNRF1-208	ENST00000568494	SCGB2A1	O75556	95 aa		10.33	□□□□□ -0.76
ZNRF1-208	ENST00000568494	CLEC3B	P05452	202 aa		10.33	□□□□□ -0.76
ZNRF1-208	ENST00000568494	SLC25A16	P16260	332 aa		10.33	□□□□□ -0.76
ZNRF1-208	ENST00000568494	RAB4B	P61018	213 aa		10.33	□□□□□ -0.76
ZNRF1-208	ENST00000568494		Q5PR19	223 aa		10.33	□□□□□ -0.76
ZNRF1-208	ENST00000568494	SIGLEC15	Q6ZMC9	328 aa		10.33	□□□□□ -0.76
ZNRF1-208	ENST00000568494	S100A7A	Q86SG5	101 aa		10.33	□□□□□ -0.76
ZNRF1-208	ENST00000568494	NDUFAF3	Q9BU61	184 aa		10.33	□□□□□ -0.76
ZNRF1-208	ENST00000568494	MLST8	Q9BVC4	326 aa		10.33	□□□□□ -0.76
ZNRF1-208	ENST00000568494	LINC00527	Q9UJ94	153 aa		10.33	□□□□□ -0.76
ZNRF1-208	ENST00000568494	RNF24	Q9Y225	148 aa		10.33	□□□□□ -0.76
ZNRF1-208	ENST00000568494	SCGB1D1	O95968	90 aa		10.33	□□□□□ -0.76
ZNRF1-208	ENST00000568494	LTA	P01374	205 aa		10.33	□□□□□ -0.76
ZNRF1-208	ENST00000568494	PRB4	P10163	310 aa	Predicted RBP	10.33	□□□□□ -0.76
ZNRF1-208	ENST00000568494	IER3	P46695	156 aa		10.33	□□□□□ -0.76
ZNRF1-208	ENST00000568494	GOLT1A	Q6ZVE7	132 aa		10.33	□□□□□ -0.76
ZNRF1-208	ENST00000568494	GRAMD2B	Q96HH9	432 aa		10.33	□□□□□ -0.76
ZNRF1-208	ENST00000568494	IGHV3OR16-8	A0A075B7F1	116 aa		10.32	□□□□□ -0.76
ZNRF1-208	ENST00000568494	TRAV8-1	A0A0A6YYK1	113 aa		10.32	□□□□□ -0.76
ZNRF1-208	ENST00000568494		A6NDX4	124 aa		10.32	□□□□□ -0.76
ZNRF1-208	ENST00000568494		H3BUX3	64 aa		10.32	□□□□□ -0.76
ZNRF1-208	ENST00000568494	ESD	P10768	282 aa		10.32	□□□□□ -0.76
ZNRF1-208	ENST00000568494	CRISP2	P16562	243 aa		10.32	□□□□□ -0.76
ZNRF1-208	ENST00000568494	PAFAH1B2	P68402	229 aa		10.32	□□□□□ -0.76
ZNRF1-208	ENST00000568494	SLC35B1	P78383	322 aa		10.32	□□□□□ -0.76
ZNRF1-208	ENST00000568494	RPL19	P84098	196 aa	Known RBP	10.32	□□□□□ -0.76
ZNRF1-208	ENST00000568494	CLEC19A	Q6UXS0	136 aa		10.32	□□□□□ -0.76
ZNRF1-208	ENST00000568494	LINC00322	Q6ZN03	302 aa	Predicted RBP	10.32	□□□□□ -0.76
ZNRF1-208	ENST00000568494	CCDC140	Q96MF4	163 aa		10.32	□□□□□ -0.76
ZNRF1-208	ENST00000568494	FOXC2	Q99958	501 aa		10.32	□□□□□ -0.76
ZNRF1-208	ENST00000568494	GNB1L	Q9BYB4	327 aa		10.32	□□□□□ -0.76
ZNRF1-208	ENST00000568494	RABAC1	Q9UI14	185 aa		10.32	□□□□□ -0.76
ZNRF1-208	ENST00000568494	NAGK	Q9UJ70	344 aa		10.32	□□□□□ -0.76
ZNRF1-208	ENST00000568494	TP53TG3	Q9ULZ0	132 aa		10.32	□□□□□ -0.76
ZNRF1-208	ENST00000568494		A0A096LNT2	108 aa		10.31	□□□□□ -0.76
ZNRF1-208	ENST00000568494	TRAV41	A0A0B4J266	112 aa		10.31	□□□□□ -0.76
ZNRF1-208	ENST00000568494	SNURFL	B1AK76	121 aa		10.31	□□□□□ -0.76
ZNRF1-208	ENST00000568494	IGLV2-11	P01706	119 aa		10.31	□□□□□ -0.76
ZNRF1-208	ENST00000568494	TPPP2	P59282	170 aa		10.31	□□□□□ -0.76
ZNRF1-208	ENST00000568494	LBH	Q53QV2	105 aa	Predicted RBP	10.31	□□□□□ -0.76
ZNRF1-208	ENST00000568494	C19orf54	Q5BKX5	351 aa		10.31	□□□□□ -0.76
ZNRF1-208	ENST00000568494	TOMM20L	Q6UXN7	152 aa		10.31	□□□□□ -0.76
ZNRF1-208	ENST00000568494	LYPD1	Q8N2G4	141 aa		10.31	□□□□□ -0.76
ZNRF1-208	ENST00000568494	WFDC11	Q8NEX6	87 aa		10.31	□□□□□ -0.76
ZNRF1-208	ENST00000568494	SMIM12	Q96EX1	92 aa		10.31	□□□□□ -0.76
ZNRF1-208	ENST00000568494	TLN2	Q9Y4G6	2542 aa		10.31	□□□□□ -0.76
ZNRF1-208	ENST00000568494	WDR73	Q6P4I2	378 aa		10.31	□□□□□ -0.76
ZNRF1-208	ENST00000568494	PRNT	Q86SH4	94 aa		10.31	□□□□□ -0.76
ZNRF1-208	ENST00000568494		Q86TA4	180 aa		10.31	□□□□□ -0.76
ZNRF1-208	ENST00000568494	EEF1AKMT3	Q96AZ1	226 aa		10.31	□□□□□ -0.76
ZNRF1-208	ENST00000568494	GNB4	Q9HAV0	340 aa		10.31	□□□□□ -0.76
ZNRF1-208	ENST00000568494		A0A1B0GV90	55 aa		10.3	□□□□□ -0.76
ZNRF1-208	ENST00000568494	IZUMO1R	A6ND01	250 aa		10.3	□□□□□ -0.76
ZNRF1-208	ENST00000568494	CRIP2	P52943	208 aa	Predicted RBP	10.3	□□□□□ -0.76
ZNRF1-208	ENST00000568494	LINC00310	P59036	64 aa		10.3	□□□□□ -0.76
ZNRF1-208	ENST00000568494	ATP5G2	Q06055	141 aa		10.3	□□□□□ -0.76
ZNRF1-208	ENST00000568494		Q0VG73	95 aa		10.3	□□□□□ -0.76
ZNRF1-208	ENST00000568494	COX19	Q49B96	90 aa		10.3	□□□□□ -0.76
ZNRF1-208	ENST00000568494	PRSS57	Q6UWY2	283 aa		10.3	□□□□□ -0.76
ZNRF1-208	ENST00000568494		Q71RC1	249 aa	Predicted RBP	10.3	□□□□□ -0.76
ZNRF1-208	ENST00000568494	LINC01356	Q8N9X3	169 aa		10.3	□□□□□ -0.76
ZNRF1-208	ENST00000568494		Q96MF0	132 aa		10.3	□□□□□ -0.76
ZNRF1-208	ENST00000568494	C2orf88	Q9BSF0	95 aa		10.3	□□□□□ -0.76
ZNRF1-208	ENST00000568494	SMAD5-AS1	Q9Y6J3	95 aa		10.3	□□□□□ -0.76
ZNRF1-208	ENST00000568494	HIVEP1	P15822	2718 aa		10.3	□□□□□ -0.76
ZNRF1-208	ENST00000568494	SERF1A	O75920	110 aa		10.29	□□□□□ -0.76
ZNRF1-208	ENST00000568494	MT-ND6	P03923	174 aa		10.29	□□□□□ -0.76
ZNRF1-208	ENST00000568494	C1orf194	Q5T5A4	169 aa		10.29	□□□□□ -0.76
ZNRF1-208	ENST00000568494	MRPL54	Q6P161	138 aa	Known RBP	10.29	□□□□□ -0.76
ZNRF1-208	ENST00000568494	BAGE3	Q86Y29	109 aa		10.29	□□□□□ -0.76
ZNRF1-208	ENST00000568494	CIART	Q8N365	385 aa	Predicted RBP	10.29	□□□□□ -0.76
ZNRF1-208	ENST00000568494	MAPK1IP1L	Q8NDC0	245 aa		10.29	□□□□□ -0.76
ZNRF1-208	ENST00000568494	ZFAND3	Q9H8U3	227 aa		10.29	□□□□□ -0.76
ZNRF1-208	ENST00000568494	CSPG4	Q6UVK1	2322 aa		10.29	□□□□□ -0.76
ZNRF1-208	ENST00000568494	TRBV6-1	A0A0K0K1D8	114 aa		10.29	□□□□□ -0.76
ZNRF1-208	ENST00000568494		M0R3E3	92 aa		10.29	□□□□□ -0.76
ZNRF1-208	ENST00000568494	BMPR1B	O00238	502 aa		10.29	□□□□□ -0.76
ZNRF1-208	ENST00000568494	RPL7	P18124	248 aa	Known RBP	10.29	□□□□□ -0.76

Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms