RNA–Protein interactions for RNA: ENST00000568301.1

COMMD4-223, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 666 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-223ENST00000568301 NUDT3O95989 172 aa10.53□□□□□ -0.72
COMMD4-223ENST00000568301 CXCL3P19876 107 aa10.53□□□□□ -0.72
COMMD4-223ENST00000568301 RHOBP62745 196 aa10.53□□□□□ -0.72
COMMD4-223ENST00000568301 FCN2Q15485 313 aa10.53□□□□□ -0.72
COMMD4-223ENST00000568301 PSG3Q16557 428 aa10.53□□□□□ -0.72
COMMD4-223ENST00000568301 PYDC2Q56P42 97 aa10.53□□□□□ -0.72
COMMD4-223ENST00000568301 SRRQ9GZT4 340 aa10.53□□□□□ -0.72
COMMD4-223ENST00000568301 PPP1R14DQ9NXH3 145 aa10.53□□□□□ -0.72
COMMD4-223ENST00000568301 RNF24Q9Y225 148 aa10.53□□□□□ -0.72
COMMD4-223ENST00000568301 OR5G3P0C626 314 aa10.52□□□□□ -0.73
COMMD4-223ENST00000568301 LINC00869P0C866 280 aa10.52□□□□□ -0.73
COMMD4-223ENST00000568301 UBE2MP61081 183 aaKnown RBP10.52□□□□□ -0.73
COMMD4-223ENST00000568301 HIST1H1AQ02539 215 aaPredicted RBP10.52□□□□□ -0.73
COMMD4-223ENST00000568301 ZNF493Q6ZR52 646 aa10.52□□□□□ -0.73
COMMD4-223ENST00000568301 C16orf74Q96GX8 76 aa10.52□□□□□ -0.73
COMMD4-223ENST00000568301 LINC00588Q9Y4M8 146 aa10.52□□□□□ -0.73
COMMD4-223ENST00000568301 TIMM8BQ9Y5J9 83 aaPredicted RBP10.52□□□□□ -0.73
COMMD4-223ENST00000568301 SMCO3A2RU48 225 aa10.51□□□□□ -0.73
COMMD4-223ENST00000568301 PMS2P5A8MQ11 134 aa10.51□□□□□ -0.73
COMMD4-223ENST00000568301 K7EPK0 472 aa10.51□□□□□ -0.73
COMMD4-223ENST00000568301 POLR2GP62487 172 aaKnown RBP eCLIP10.51□□□□□ -0.73
COMMD4-223ENST00000568301 LRRC20Q8TCA0 184 aa10.51□□□□□ -0.73
COMMD4-223ENST00000568301 SMIM8Q96KF7 97 aa10.51□□□□□ -0.73
COMMD4-223ENST00000568301 UHRF2Q96PU4 802 aa10.51□□□□□ -0.73
COMMD4-223ENST00000568301 PSENENQ9NZ42 101 aa10.51□□□□□ -0.73
COMMD4-223ENST00000568301 FNDC10F2Z333 226 aa10.5□□□□□ -0.73
COMMD4-223ENST00000568301 HTN1P15515 57 aa10.5□□□□□ -0.73
COMMD4-223ENST00000568301 CDKN1BP46527 198 aa10.5□□□□□ -0.73
COMMD4-223ENST00000568301 DLK1P80370 383 aa10.5□□□□□ -0.73
COMMD4-223ENST00000568301 Q8N1X5 172 aa10.5□□□□□ -0.73
COMMD4-223ENST00000568301 RNF141Q8WVD5 230 aa10.5□□□□□ -0.73
COMMD4-223ENST00000568301 RPUSD4Q96CM3 377 aaKnown RBP10.5□□□□□ -0.73
COMMD4-223ENST00000568301 NPVFQ9HCQ7 196 aa10.5□□□□□ -0.73
COMMD4-223ENST00000568301 C9orf170A2RU37 121 aa10.49□□□□□ -0.73
COMMD4-223ENST00000568301 H7BYZ3 331 aa10.49□□□□□ -0.73
COMMD4-223ENST00000568301 MRPS12O15235 138 aaKnown RBP10.49□□□□□ -0.73
COMMD4-223ENST00000568301 ADAP1O75689 374 aa10.49□□□□□ -0.73
COMMD4-223ENST00000568301 ANXA7P20073 488 aaKnown RBP10.49□□□□□ -0.73
COMMD4-223ENST00000568301 CLINT1Q14677 625 aa10.49□□□□□ -0.73
COMMD4-223ENST00000568301 C4orf46Q504U0 113 aa10.49□□□□□ -0.73
COMMD4-223ENST00000568301 PXDC1Q5TGL8 231 aa10.49□□□□□ -0.73
COMMD4-223ENST00000568301 PATE2Q6UY27 113 aa10.49□□□□□ -0.73
COMMD4-223ENST00000568301 SSX7Q7RTT5 188 aa10.49□□□□□ -0.73
COMMD4-223ENST00000568301 RNASE8Q8TDE3 154 aaKnown RBP10.49□□□□□ -0.73
COMMD4-223ENST00000568301 TMEM263Q8WUH6 116 aaKnown RBP10.49□□□□□ -0.73
COMMD4-223ENST00000568301 ZNF503Q96F45 646 aa10.49□□□□□ -0.73
COMMD4-223ENST00000568301 SDHCQ99643 169 aaPredicted RBP10.49□□□□□ -0.73
COMMD4-223ENST00000568301 C20orf144Q9BQM9 153 aa10.49□□□□□ -0.73
COMMD4-223ENST00000568301 CCDC32Q9BV29 185 aa10.49□□□□□ -0.73
COMMD4-223ENST00000568301 ARL6Q9H0F7 186 aa10.49□□□□□ -0.73
COMMD4-223ENST00000568301 NOP10Q9NPE3 64 aaKnown RBP10.49□□□□□ -0.73
COMMD4-223ENST00000568301 SCRT2Q9NQ03 307 aa10.49□□□□□ -0.73
COMMD4-223ENST00000568301 CXCL2P19875 107 aa10.48□□□□□ -0.73
COMMD4-223ENST00000568301 ZNF846Q147U1 533 aa10.48□□□□□ -0.73
COMMD4-223ENST00000568301 TEPPQ6URK8 271 aa10.48□□□□□ -0.73
COMMD4-223ENST00000568301 TMEM14EPQ6UXP3 125 aa10.48□□□□□ -0.73
COMMD4-223ENST00000568301 OR10J6PQ8NGY7 276 aa10.48□□□□□ -0.73
COMMD4-223ENST00000568301 ARV1Q9H2C2 271 aa10.48□□□□□ -0.73
COMMD4-223ENST00000568301 Q9H8V8 135 aa10.48□□□□□ -0.73
COMMD4-223ENST00000568301 ZNF331Q9NQX6 463 aaPredicted RBP10.48□□□□□ -0.73
COMMD4-223ENST00000568301 NAP1L6A6NFF2 107 aa10.47□□□□□ -0.73
COMMD4-223ENST00000568301 SSSCA1O60232 199 aa10.47□□□□□ -0.73
COMMD4-223ENST00000568301 BAK1Q16611 211 aa10.47□□□□□ -0.73
COMMD4-223ENST00000568301 LCN15Q6UWW0 184 aa10.47□□□□□ -0.73
COMMD4-223ENST00000568301 LINC00612Q8N6U2 182 aa10.47□□□□□ -0.73
COMMD4-223ENST00000568301 OR10P1Q8NGE3 313 aa10.47□□□□□ -0.73
COMMD4-223ENST00000568301 SLC50A1Q9BRV3 221 aa10.47□□□□□ -0.73
COMMD4-223ENST00000568301 GOSR2O14653 212 aa10.46□□□□□ -0.73
COMMD4-223ENST00000568301 CCNKO75909 580 aa10.46□□□□□ -0.73
COMMD4-223ENST00000568301 METTL15P1P0C7V9 234 aa10.46□□□□□ -0.73
COMMD4-223ENST00000568301 TAS2R30P59541 319 aa10.46□□□□□ -0.73
COMMD4-223ENST00000568301 RRAS2P62070 204 aaPredicted RBP10.46□□□□□ -0.73
COMMD4-223ENST00000568301 OR5I1Q13606 314 aa10.46□□□□□ -0.73
COMMD4-223ENST00000568301 TRIQKQ629K1 86 aa10.46□□□□□ -0.73
COMMD4-223ENST00000568301 RXFP4Q8TDU9 374 aa10.46□□□□□ -0.73
COMMD4-223ENST00000568301 GNPNAT1Q96EK6 184 aaPredicted RBP10.46□□□□□ -0.73
COMMD4-223ENST00000568301 MGAT4CQ9UBM8 478 aa10.46□□□□□ -0.73
COMMD4-223ENST00000568301 TRAV26-1A0A087WT03 109 aa10.45□□□□□ -0.74
COMMD4-223ENST00000568301 CENPXA8MT69 81 aa10.45□□□□□ -0.74
COMMD4-223ENST00000568301 H3BNG1 76 aa10.45□□□□□ -0.74
COMMD4-223ENST00000568301 TSC22D2O75157 780 aa10.45□□□□□ -0.74
COMMD4-223ENST00000568301 NDUFB6O95139 128 aa10.45□□□□□ -0.74
COMMD4-223ENST00000568301 IL7P13232 177 aa10.45□□□□□ -0.74
COMMD4-223ENST00000568301 M6PRP20645 277 aa10.45□□□□□ -0.74
COMMD4-223ENST00000568301 INPP1P49441 399 aa10.45□□□□□ -0.74
COMMD4-223ENST00000568301 SLC38A11Q08AI6 406 aa10.45□□□□□ -0.74
COMMD4-223ENST00000568301 TTC32Q5I0X7 151 aa10.45□□□□□ -0.74
COMMD4-223ENST00000568301 LINC00305Q7Z4B0 112 aa10.45□□□□□ -0.74
COMMD4-223ENST00000568301 SPATA12Q7Z6I5 190 aa10.45□□□□□ -0.74
COMMD4-223ENST00000568301 ZNF546Q86UE3 836 aa10.45□□□□□ -0.74
COMMD4-223ENST00000568301 BPIFA4PQ86YQ2 179 aa10.45□□□□□ -0.74
COMMD4-223ENST00000568301 CCDC28AQ8IWP9 274 aa10.45□□□□□ -0.74
COMMD4-223ENST00000568301 GGACTQ9BVM4 153 aa10.45□□□□□ -0.74
COMMD4-223ENST00000568301 OR4E1P0C645 316 aa10.44□□□□□ -0.74
COMMD4-223ENST00000568301 BTF3P20290 206 aaKnown RBP10.44□□□□□ -0.74
COMMD4-223ENST00000568301 UPK3BQ9BT76 320 aa10.44□□□□□ -0.74
COMMD4-223ENST00000568301 Q9H3A6 140 aa10.44□□□□□ -0.74
COMMD4-223ENST00000568301 A0A1W2PPQ1 181 aa10.43□□□□□ -0.74
COMMD4-223ENST00000568301 AGPAT2O15120 278 aa10.43□□□□□ -0.74
COMMD4-223ENST00000568301 PRB4P10163 310 aaPredicted RBP10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms