RNA–Protein interactions for RNA: ENST00000568205.1

SPG7-218, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 463 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-218ENST00000568205 FHITP49789 147 aa11.72□□□□□ -0.53
SPG7-218ENST00000568205 UBE2L3P68036 154 aaKnown RBP11.72□□□□□ -0.53
SPG7-218ENST00000568205 GUK1Q16774 197 aa11.72□□□□□ -0.53
SPG7-218ENST00000568205 ODF3L2Q3SX64 289 aa11.72□□□□□ -0.53
SPG7-218ENST00000568205 DPPA3Q6W0C5 159 aa11.72□□□□□ -0.53
SPG7-218ENST00000568205 PQLC2Q6ZP29 291 aa11.72□□□□□ -0.53
SPG7-218ENST00000568205 FAM213BQ8TBF2 198 aa11.72□□□□□ -0.53
SPG7-218ENST00000568205 RNF141Q8WVD5 230 aa11.72□□□□□ -0.53
SPG7-218ENST00000568205 FXYD5Q96DB9 178 aa11.72□□□□□ -0.53
SPG7-218ENST00000568205 PHYHIPLQ96FC7 376 aa11.72□□□□□ -0.53
SPG7-218ENST00000568205 C16orf92Q96LL3 132 aa11.72□□□□□ -0.53
SPG7-218ENST00000568205 AURKAIP1Q9NWT8 199 aaPredicted RBP11.72□□□□□ -0.53
SPG7-218ENST00000568205 ZNF586Q9NXT0 402 aa11.72□□□□□ -0.53
SPG7-218ENST00000568205 ISLRO14498 428 aa11.71□□□□□ -0.53
SPG7-218ENST00000568205 OR10J4P0C629 311 aa11.71□□□□□ -0.53
SPG7-218ENST00000568205 ZNF688P0C7X2 276 aa11.71□□□□□ -0.53
SPG7-218ENST00000568205 ARL14EPLP0DKL9 152 aa11.71□□□□□ -0.53
SPG7-218ENST00000568205 ID1P41134 155 aa11.71□□□□□ -0.53
SPG7-218ENST00000568205 PSMB3P49720 205 aa11.71□□□□□ -0.53
SPG7-218ENST00000568205 RAB5CP51148 216 aa11.71□□□□□ -0.53
SPG7-218ENST00000568205 CMC4P56277 68 aaPredicted RBP11.71□□□□□ -0.53
SPG7-218ENST00000568205 SNRPD3P62318 126 aaKnown RBP11.71□□□□□ -0.53
SPG7-218ENST00000568205 Q8N1Y9 231 aa11.71□□□□□ -0.53
SPG7-218ENST00000568205 LRRC20Q8TCA0 184 aa11.71□□□□□ -0.53
SPG7-218ENST00000568205 MAP6D1Q9H9H5 199 aa11.71□□□□□ -0.53
SPG7-218ENST00000568205 C19orf73Q9NVV2 129 aa11.71□□□□□ -0.53
SPG7-218ENST00000568205 UBQLN2Q9UHD9 624 aa11.71□□□□□ -0.53
SPG7-218ENST00000568205 TRBV19A0A075B6N1 114 aa11.7□□□□□ -0.54
SPG7-218ENST00000568205 TRAV8-2A0A0B4J237 113 aa11.7□□□□□ -0.54
SPG7-218ENST00000568205 MAP1LC3B2A6NCE7 125 aa11.7□□□□□ -0.54
SPG7-218ENST00000568205 OR11H12B2RN74 326 aa11.7□□□□□ -0.54
SPG7-218ENST00000568205 SLC17A3O00476 420 aa11.7□□□□□ -0.54
SPG7-218ENST00000568205 NBEAP1P0C6P0 100 aa11.7□□□□□ -0.54
SPG7-218ENST00000568205 SULT1A2P50226 295 aa11.7□□□□□ -0.54
SPG7-218ENST00000568205 PSMG4Q5JS54 123 aa11.7□□□□□ -0.54
SPG7-218ENST00000568205 FAM74A1Q5RGS3 127 aa11.7□□□□□ -0.54
SPG7-218ENST00000568205 ALKAL2Q6UX46 152 aa11.7□□□□□ -0.54
SPG7-218ENST00000568205 SAT2Q96F10 170 aaPredicted RBP11.7□□□□□ -0.54
SPG7-218ENST00000568205 FAM110AQ9BQ89 295 aa11.7□□□□□ -0.54
SPG7-218ENST00000568205 SLC50A1Q9BRV3 221 aa11.7□□□□□ -0.54
SPG7-218ENST00000568205 MAP1LC3BQ9GZQ8 125 aa11.7□□□□□ -0.54
SPG7-218ENST00000568205 ZNF253O75346 499 aa11.69□□□□□ -0.54
SPG7-218ENST00000568205 CXorf1O96002 111 aa11.69□□□□□ -0.54
SPG7-218ENST00000568205 GCHFRP30047 84 aa11.69□□□□□ -0.54
SPG7-218ENST00000568205 DEFB131AP59861 70 aa11.69□□□□□ -0.54
SPG7-218ENST00000568205 PDE6HQ13956 83 aa11.69□□□□□ -0.54
SPG7-218ENST00000568205 IGFL4Q6B9Z1 124 aa11.69□□□□□ -0.54
SPG7-218ENST00000568205 BLNKQ8WV28 456 aa11.69□□□□□ -0.54
SPG7-218ENST00000568205 LINC00052Q96N35 136 aa11.69□□□□□ -0.54
SPG7-218ENST00000568205 WFDC10AQ9H1F0 79 aa11.69□□□□□ -0.54
SPG7-218ENST00000568205 ZNF331Q9NQX6 463 aaPredicted RBP11.69□□□□□ -0.54
SPG7-218ENST00000568205 NDUFB4O95168 129 aa11.68□□□□□ -0.54
SPG7-218ENST00000568205 MBD3L1Q8WWY6 194 aa11.68□□□□□ -0.54
SPG7-218ENST00000568205 C20orf173Q96LM9 149 aa11.68□□□□□ -0.54
SPG7-218ENST00000568205 K7EIL1 84 aa11.67□□□□□ -0.54
SPG7-218ENST00000568205 H2AFB1P0C5Y9 115 aa11.67□□□□□ -0.54
SPG7-218ENST00000568205 FGF8P55075 233 aaPredicted RBP11.67□□□□□ -0.54
SPG7-218ENST00000568205 IQCF2Q8IXL9 164 aa11.67□□□□□ -0.54
SPG7-218ENST00000568205 DEFB125Q8N687 156 aa11.67□□□□□ -0.54
SPG7-218ENST00000568205 RNF182Q8N6D2 247 aa11.67□□□□□ -0.54
SPG7-218ENST00000568205 SFT2D1Q8WV19 159 aa11.67□□□□□ -0.54
SPG7-218ENST00000568205 TMEM167BQ9NRX6 74 aa11.67□□□□□ -0.54
SPG7-218ENST00000568205 MEGF8Q7Z7M0 2845 aa11.66□□□□□ -0.54
SPG7-218ENST00000568205 HLA-DMBP28068 263 aa11.66□□□□□ -0.54
SPG7-218ENST00000568205 PSG9Q00887 426 aa11.66□□□□□ -0.54
SPG7-218ENST00000568205 ZNF124Q15973 351 aa11.66□□□□□ -0.54
SPG7-218ENST00000568205 PSG3Q16557 428 aa11.66□□□□□ -0.54
SPG7-218ENST00000568205 APRG1Q8IVJ8 170 aa11.66□□□□□ -0.54
SPG7-218ENST00000568205 SUN5Q8TC36 379 aa11.66□□□□□ -0.54
SPG7-218ENST00000568205 CLEC5AQ9NY25 188 aa11.66□□□□□ -0.54
SPG7-218ENST00000568205 ZNF705EA8MWA4 302 aaPredicted RBP11.65□□□□□ -0.54
SPG7-218ENST00000568205 RANP62826 216 aaKnown RBP11.65□□□□□ -0.54
SPG7-218ENST00000568205 TMPRSS5Q9H3S3 457 aa11.65□□□□□ -0.54
SPG7-218ENST00000568205 AAMDCQ9H7C9 122 aa11.65□□□□□ -0.54
SPG7-218ENST00000568205 FBN3Q75N90 2809 aa11.65□□□□□ -0.54
SPG7-218ENST00000568205 TRAV1-1A0A0B4J248 108 aa11.64□□□□□ -0.55
SPG7-218ENST00000568205 A0A1B0GV50 99 aa11.64□□□□□ -0.55
SPG7-218ENST00000568205 KNCNA6PVL3 124 aa11.64□□□□□ -0.55
SPG7-218ENST00000568205 IGHV4-30-4P0DP06 118 aa11.64□□□□□ -0.55
SPG7-218ENST00000568205 DEFB1P60022 68 aa11.64□□□□□ -0.55
SPG7-218ENST00000568205 DEFA6Q01524 100 aa11.64□□□□□ -0.55
SPG7-218ENST00000568205 TEX261Q6UWH6 196 aa11.64□□□□□ -0.55
SPG7-218ENST00000568205 LYPD1Q8N2G4 141 aa11.64□□□□□ -0.55
SPG7-218ENST00000568205 EXOC3-AS1Q8N2X6 119 aa11.64□□□□□ -0.55
SPG7-218ENST00000568205 ZNF738Q8NE65 137 aa11.64□□□□□ -0.55
SPG7-218ENST00000568205 CITED4Q96RK1 184 aa11.64□□□□□ -0.55
SPG7-218ENST00000568205 Q9H3A6 140 aa11.64□□□□□ -0.55
SPG7-218ENST00000568205 SRD5A3Q9H8P0 318 aa11.64□□□□□ -0.55
SPG7-218ENST00000568205 ICAM4Q14773 271 aa11.63□□□□□ -0.55
SPG7-218ENST00000568205 FOXI2Q6ZQN5 318 aa11.63□□□□□ -0.55
SPG7-218ENST00000568205 ZNF680Q8NEM1 530 aa11.63□□□□□ -0.55
SPG7-218ENST00000568205 RPUSD4Q96CM3 377 aaKnown RBP11.63□□□□□ -0.55
SPG7-218ENST00000568205 MRPL53Q96EL3 112 aaKnown RBP11.63□□□□□ -0.55
SPG7-218ENST00000568205 TUBA4BQ9H853 241 aa11.63□□□□□ -0.55
SPG7-218ENST00000568205 OTORQ9NRC9 128 aa11.63□□□□□ -0.55
SPG7-218ENST00000568205 PRELID1Q9Y255 219 aa11.63□□□□□ -0.55
SPG7-218ENST00000568205 ZNF705FA8MVS1 300 aaPredicted RBP11.62□□□□□ -0.55
SPG7-218ENST00000568205 A8MZ25 164 aa11.62□□□□□ -0.55
SPG7-218ENST00000568205 TEX46H3BTG2 121 aa11.62□□□□□ -0.55
SPG7-218ENST00000568205 M0R3E3 92 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms