RNA–Protein interactions for RNA: ENST00000567379.5

VPS9D1-206, Transcript of VPS9 domain containing 1, humanhuman

TSL 5

Gene VPS9D1, Length 694 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-206ENST00000567379 BUB3O43684 328 aa8.36□□□□□ -1.07
VPS9D1-206ENST00000567379 TRBV12-3P01733 135 aa8.36□□□□□ -1.07
VPS9D1-206ENST00000567379 CRYBA1P05813 215 aa8.36□□□□□ -1.07
VPS9D1-206ENST00000567379 SRD5A1P18405 259 aa8.36□□□□□ -1.07
VPS9D1-206ENST00000567379 UBE2G1P62253 170 aa8.36□□□□□ -1.07
VPS9D1-206ENST00000567379 GNG5P63218 68 aa8.36□□□□□ -1.07
VPS9D1-206ENST00000567379 FAM106AQ4KMX7 169 aa8.36□□□□□ -1.07
VPS9D1-206ENST00000567379 ZNF418Q8TF45 676 aaPredicted RBP8.36□□□□□ -1.07
VPS9D1-206ENST00000567379 GRAMD2BQ96HH9 432 aa8.36□□□□□ -1.07
VPS9D1-206ENST00000567379 C17orf77Q96MU5 243 aa8.36□□□□□ -1.07
VPS9D1-206ENST00000567379 OR5B12Q96R08 314 aa8.36□□□□□ -1.07
VPS9D1-206ENST00000567379 U3KQE9 123 aa8.36□□□□□ -1.07
VPS9D1-206ENST00000567379 A0A087X0K7 114 aa8.35□□□□□ -1.07
VPS9D1-206ENST00000567379 A0A1W2PS18 150 aa8.35□□□□□ -1.07
VPS9D1-206ENST00000567379 FAM181BA6NEQ2 426 aa8.35□□□□□ -1.07
VPS9D1-206ENST00000567379 PGPEP1LA6NFU8 196 aa8.35□□□□□ -1.07
VPS9D1-206ENST00000567379 K7EQM0 130 aa8.35□□□□□ -1.07
VPS9D1-206ENST00000567379 ZNF207O43670 478 aaKnown RBP8.35□□□□□ -1.07
VPS9D1-206ENST00000567379 ZNF253O75346 499 aa8.35□□□□□ -1.07
VPS9D1-206ENST00000567379 TCRAP04437 139 aa8.35□□□□□ -1.07
VPS9D1-206ENST00000567379 RPLP1P05386 114 aaKnown RBP8.35□□□□□ -1.07
VPS9D1-206ENST00000567379 S100PP25815 95 aa8.35□□□□□ -1.07
VPS9D1-206ENST00000567379 CSN1S1P47710 185 aa8.35□□□□□ -1.07
VPS9D1-206ENST00000567379 MEOX2P50222 304 aa8.35□□□□□ -1.07
VPS9D1-206ENST00000567379 TMEM183BQ1AE95 376 aa8.35□□□□□ -1.07
VPS9D1-206ENST00000567379 C10orf99Q6UWK7 81 aa8.35□□□□□ -1.07
VPS9D1-206ENST00000567379 SIGLEC15Q6ZMC9 328 aa8.35□□□□□ -1.07
VPS9D1-206ENST00000567379 EXOC3-AS1Q8N2X6 119 aa8.35□□□□□ -1.07
VPS9D1-206ENST00000567379 RNF152Q8N8N0 203 aa8.35□□□□□ -1.07
VPS9D1-206ENST00000567379 SFRP2Q96HF1 295 aa8.35□□□□□ -1.07
VPS9D1-206ENST00000567379 FMC1Q96HJ9 113 aa8.35□□□□□ -1.07
VPS9D1-206ENST00000567379 IGF2BP2-AS1Q96M15 143 aa8.35□□□□□ -1.07
VPS9D1-206ENST00000567379 SERTAD4Q9NUC0 356 aa8.35□□□□□ -1.07
VPS9D1-206ENST00000567379 AURKAIP1Q9NWT8 199 aaPredicted RBP8.35□□□□□ -1.07
VPS9D1-206ENST00000567379 KLF12Q9Y4X4 402 aa8.35□□□□□ -1.07
VPS9D1-206ENST00000567379 VPS13CQ709C8 3753 aa8.35□□□□□ -1.07
VPS9D1-206ENST00000567379 TRAV34A0A0B4J273 112 aa8.34□□□□□ -1.07
VPS9D1-206ENST00000567379 ZNF320A2RRD8 509 aa8.34□□□□□ -1.07
VPS9D1-206ENST00000567379 LY6G6DO95868 133 aa8.34□□□□□ -1.07
VPS9D1-206ENST00000567379 LGALS1P09382 135 aaKnown RBP8.34□□□□□ -1.07
VPS9D1-206ENST00000567379 C16orf54Q6UWD8 224 aa8.34□□□□□ -1.07
VPS9D1-206ENST00000567379 Q6ZSV7 163 aa8.34□□□□□ -1.07
VPS9D1-206ENST00000567379 BAGE2Q86Y30 109 aa8.34□□□□□ -1.07
VPS9D1-206ENST00000567379 FAM24BQ8N5W8 94 aa8.34□□□□□ -1.07
VPS9D1-206ENST00000567379 ARL6IP6Q8N6S5 226 aa8.34□□□□□ -1.07
VPS9D1-206ENST00000567379 OR10G8Q8NGN5 311 aa8.34□□□□□ -1.07
VPS9D1-206ENST00000567379 MYOZ3Q8TDC0 251 aa8.34□□□□□ -1.07
VPS9D1-206ENST00000567379 UBE2E2Q96LR5 201 aa8.34□□□□□ -1.07
VPS9D1-206ENST00000567379 SMAD5-AS1Q9Y6J3 95 aa8.34□□□□□ -1.07
VPS9D1-206ENST00000567379 ZANQ9Y493 2812 aa8.33□□□□□ -1.08
VPS9D1-206ENST00000567379 IGHV3-66A0A0C4DH42 116 aa8.33□□□□□ -1.08
VPS9D1-206ENST00000567379 SERTM2A0A1B0GWG4 89 aa8.33□□□□□ -1.08
VPS9D1-206ENST00000567379 K7EMT4 169 aa8.33□□□□□ -1.08
VPS9D1-206ENST00000567379 K7EN84 100 aa8.33□□□□□ -1.08
VPS9D1-206ENST00000567379 SLC17A3O00476 420 aa8.33□□□□□ -1.08
VPS9D1-206ENST00000567379 ISLRO14498 428 aa8.33□□□□□ -1.08
VPS9D1-206ENST00000567379 GCGP01275 180 aa8.33□□□□□ -1.08
VPS9D1-206ENST00000567379 RNASE1P07998 156 aaKnown RBP8.33□□□□□ -1.08
VPS9D1-206ENST00000567379 MGST1P10620 155 aaKnown RBP8.33□□□□□ -1.08
VPS9D1-206ENST00000567379 ELOBQ15370 118 aa8.33□□□□□ -1.08
VPS9D1-206ENST00000567379 RPEL1Q2QD12 228 aa8.33□□□□□ -1.08
VPS9D1-206ENST00000567379 KCNIP4Q6PIL6 250 aa8.33□□□□□ -1.08
VPS9D1-206ENST00000567379 GOLT1AQ6ZVE7 132 aa8.33□□□□□ -1.08
VPS9D1-206ENST00000567379 GPHB5Q86YW7 130 aa8.33□□□□□ -1.08
VPS9D1-206ENST00000567379 KLHDC1Q8N7A1 406 aa8.33□□□□□ -1.08
VPS9D1-206ENST00000567379 SMIM12Q96EX1 92 aa8.33□□□□□ -1.08
VPS9D1-206ENST00000567379 LINC00479Q96M42 142 aa8.33□□□□□ -1.08
VPS9D1-206ENST00000567379 JMJD8Q96S16 334 aa8.33□□□□□ -1.08
VPS9D1-206ENST00000567379 SLC50A1Q9BRV3 221 aa8.33□□□□□ -1.08
VPS9D1-206ENST00000567379 ESM1Q9NQ30 184 aa8.33□□□□□ -1.08
VPS9D1-206ENST00000567379 BIN3Q9NQY0 253 aa8.33□□□□□ -1.08
VPS9D1-206ENST00000567379 UFC1Q9Y3C8 167 aa8.33□□□□□ -1.08
VPS9D1-206ENST00000567379 URGCP-MRPS24S4R325 110 aa8.33□□□□□ -1.08
VPS9D1-206ENST00000567379 IGHV3OR16-13A0A075B7E8 117 aa8.32□□□□□ -1.08
VPS9D1-206ENST00000567379 IGHV3-49A0A0A0MS15 119 aa8.32□□□□□ -1.08
VPS9D1-206ENST00000567379 IGHV3-74A0A0B4J1X5 117 aa8.32□□□□□ -1.08
VPS9D1-206ENST00000567379 TRBV6-1A0A0K0K1D8 114 aa8.32□□□□□ -1.08
VPS9D1-206ENST00000567379 IGLV2-8P01709 118 aa8.32□□□□□ -1.08
VPS9D1-206ENST00000567379 APOHP02749 345 aaPredicted RBP8.32□□□□□ -1.08
VPS9D1-206ENST00000567379 RAB5AP20339 215 aa8.32□□□□□ -1.08
VPS9D1-206ENST00000567379 BMI1P35226 326 aa8.32□□□□□ -1.08
VPS9D1-206ENST00000567379 ERVFC1-1P60608 527 aa8.32□□□□□ -1.08
VPS9D1-206ENST00000567379 UNQ9165/PRO28630Q6UXU0 137 aa8.32□□□□□ -1.08
VPS9D1-206ENST00000567379 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.32□□□□□ -1.08
VPS9D1-206ENST00000567379 GLMPQ8WWB7 406 aa8.32□□□□□ -1.08
VPS9D1-206ENST00000567379 YPEL4Q96NS1 127 aa8.32□□□□□ -1.08
VPS9D1-206ENST00000567379 IMMP2LQ96T52 175 aa8.32□□□□□ -1.08
VPS9D1-206ENST00000567379 SMR3AQ99954 134 aa8.32□□□□□ -1.08
VPS9D1-206ENST00000567379 DAZ1Q9NQZ3 744 aaKnown RBP8.32□□□□□ -1.08
VPS9D1-206ENST00000567379 OSTCQ9NRP0 149 aa8.32□□□□□ -1.08
VPS9D1-206ENST00000567379 IGHV7-4-1A0A0J9YVY3 117 aa8.31□□□□□ -1.08
VPS9D1-206ENST00000567379 FBLL1A6NHQ2 334 aaKnown RBP8.31□□□□□ -1.08
VPS9D1-206ENST00000567379 DIRC3C9JPN6 131 aa8.31□□□□□ -1.08
VPS9D1-206ENST00000567379 PFN1P07737 140 aaKnown RBP8.31□□□□□ -1.08
VPS9D1-206ENST00000567379 FOLR2P14207 255 aa8.31□□□□□ -1.08
VPS9D1-206ENST00000567379 HILS1P60008 231 aa8.31□□□□□ -1.08
VPS9D1-206ENST00000567379 OR5I1Q13606 314 aa8.31□□□□□ -1.08
VPS9D1-206ENST00000567379 Q71RC1 249 aaPredicted RBP8.31□□□□□ -1.08
VPS9D1-206ENST00000567379 TMEM75Q8N9X5 138 aa8.31□□□□□ -1.08
VPS9D1-206ENST00000567379 BTF3L4Q96K17 158 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms