RNA–Protein interactions for RNA: ENST00000567071.5

CAPN3-216, Transcript of calpain 3, humanhuman

TSL 4

Gene CAPN3, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-216ENST00000567071 AGPAT2O15120 278 aa6.95□□□□□ -1.3
CAPN3-216ENST00000567071 SMR3BP02814 79 aaPredicted RBP6.95□□□□□ -1.3
CAPN3-216ENST00000567071 IGLC1P0CG04 106 aa6.95□□□□□ -1.3
CAPN3-216ENST00000567071 TPT1P13693 172 aaKnown RBP6.95□□□□□ -1.3
CAPN3-216ENST00000567071 GATA2P23769 480 aaPredicted RBP6.95□□□□□ -1.3
CAPN3-216ENST00000567071 ARL3P36405 182 aa6.95□□□□□ -1.3
CAPN3-216ENST00000567071 NPBWR1P48145 328 aa6.95□□□□□ -1.3
CAPN3-216ENST00000567071 CAMLGP49069 296 aa6.95□□□□□ -1.3
CAPN3-216ENST00000567071 ELLP55199 621 aaPredicted RBP6.95□□□□□ -1.3
CAPN3-216ENST00000567071 XGP55808 180 aa6.95□□□□□ -1.3
CAPN3-216ENST00000567071 CMC4P56277 68 aaPredicted RBP6.95□□□□□ -1.3
CAPN3-216ENST00000567071 ZNF90Q03938 601 aa6.95□□□□□ -1.3
CAPN3-216ENST00000567071 MIC13Q5XKP0 118 aa6.95□□□□□ -1.3
CAPN3-216ENST00000567071 APRG1Q8IVJ8 170 aa6.95□□□□□ -1.3
CAPN3-216ENST00000567071 STOML3Q8TAV4 291 aa6.95□□□□□ -1.3
CAPN3-216ENST00000567071 TMED6Q8WW62 240 aa6.95□□□□□ -1.3
CAPN3-216ENST00000567071 GINS3Q9BRX5 216 aa6.95□□□□□ -1.3
CAPN3-216ENST00000567071 ATG101Q9BSB4 218 aa6.95□□□□□ -1.3
CAPN3-216ENST00000567071 SLC25A32Q9H2D1 315 aa6.95□□□□□ -1.3
CAPN3-216ENST00000567071 MRPL27Q9P0M9 148 aaKnown RBP6.95□□□□□ -1.3
CAPN3-216ENST00000567071 TRBV7-1A0A0A6YYK4 115 aa6.94□□□□□ -1.3
CAPN3-216ENST00000567071 IGHV3-35A0A0C4DH35 117 aa6.94□□□□□ -1.3
CAPN3-216ENST00000567071 MPDU1O75352 247 aa6.94□□□□□ -1.3
CAPN3-216ENST00000567071 CFDP00746 253 aaPredicted RBP6.94□□□□□ -1.3
CAPN3-216ENST00000567071 IGKV1-17P01599 117 aa6.94□□□□□ -1.3
CAPN3-216ENST00000567071 CLEC3BP05452 202 aa6.94□□□□□ -1.3
CAPN3-216ENST00000567071 EIF5AP63241 154 aaKnown RBP6.94□□□□□ -1.3
CAPN3-216ENST00000567071 RAB31Q13636 194 aa6.94□□□□□ -1.3
CAPN3-216ENST00000567071 TMEM182Q6ZP80 229 aaPredicted RBP6.94□□□□□ -1.3
CAPN3-216ENST00000567071 CYP2G1PQ6ZSU1 146 aa6.94□□□□□ -1.3
CAPN3-216ENST00000567071 BAP18Q8IXM2 172 aa6.94□□□□□ -1.3
CAPN3-216ENST00000567071 ZNF709Q8N972 641 aa6.94□□□□□ -1.3
CAPN3-216ENST00000567071 C15orf53Q8NAA6 179 aa6.94□□□□□ -1.3
CAPN3-216ENST00000567071 BPIFCQ8NFQ6 507 aa6.94□□□□□ -1.3
CAPN3-216ENST00000567071 TRGV9Q99603 122 aa6.94□□□□□ -1.3
CAPN3-216ENST00000567071 TXN2Q99757 166 aa6.94□□□□□ -1.3
CAPN3-216ENST00000567071 PARD6GQ9BYG4 376 aaPredicted RBP6.94□□□□□ -1.3
CAPN3-216ENST00000567071 ARV1Q9H2C2 271 aa6.94□□□□□ -1.3
CAPN3-216ENST00000567071 PXMP4Q9Y6I8 212 aa6.94□□□□□ -1.3
CAPN3-216ENST00000567071 IGHV3OR16-8A0A075B7F1 116 aa6.93□□□□□ -1.3
CAPN3-216ENST00000567071 TRAV30A0A087WSZ9 112 aa6.93□□□□□ -1.3
CAPN3-216ENST00000567071 C17orf112F2Z3M2 114 aa6.93□□□□□ -1.3
CAPN3-216ENST00000567071 NUPL2O15504 423 aaKnown RBP6.93□□□□□ -1.3
CAPN3-216ENST00000567071 SCGB2A1O75556 95 aa6.93□□□□□ -1.3
CAPN3-216ENST00000567071 CTSGP08311 255 aa6.93□□□□□ -1.3
CAPN3-216ENST00000567071 C12orf74Q32Q52 190 aa6.93□□□□□ -1.3
CAPN3-216ENST00000567071 FFAR4Q5NUL3 377 aa6.93□□□□□ -1.3
CAPN3-216ENST00000567071 FAM74A1Q5RGS3 127 aa6.93□□□□□ -1.3
CAPN3-216ENST00000567071 ALKAL2Q6UX46 152 aa6.93□□□□□ -1.3
CAPN3-216ENST00000567071 OR2G3Q8NGZ4 309 aa6.93□□□□□ -1.3
CAPN3-216ENST00000567071 GNPNAT1Q96EK6 184 aaPredicted RBP6.93□□□□□ -1.3
CAPN3-216ENST00000567071 PSMG3Q9BT73 122 aaPredicted RBP6.93□□□□□ -1.3
CAPN3-216ENST00000567071 KCNIP2Q9NS61 270 aa6.93□□□□□ -1.3
CAPN3-216ENST00000567071 DOK5Q9P104 306 aa6.93□□□□□ -1.3
CAPN3-216ENST00000567071 SLC45A2Q9UMX9 530 aa6.93□□□□□ -1.3
CAPN3-216ENST00000567071 UFC1Q9Y3C8 167 aa6.93□□□□□ -1.3
CAPN3-216ENST00000567071 TOMM40O96008 361 aa6.92□□□□□ -1.3
CAPN3-216ENST00000567071 FABP1P07148 127 aa6.92□□□□□ -1.3
CAPN3-216ENST00000567071 LINC00869P0C866 280 aa6.92□□□□□ -1.3
CAPN3-216ENST00000567071 C8orf88P0DMB2 117 aa6.92□□□□□ -1.3
CAPN3-216ENST00000567071 SPP1P10451 314 aa6.92□□□□□ -1.3
CAPN3-216ENST00000567071 PSG1P11464 419 aa6.92□□□□□ -1.3
CAPN3-216ENST00000567071 LYZP61626 148 aa6.92□□□□□ -1.3
CAPN3-216ENST00000567071 B2MP61769 119 aa6.92□□□□□ -1.3
CAPN3-216ENST00000567071 TMEM41BQ5BJD5 291 aa6.92□□□□□ -1.3
CAPN3-216ENST00000567071 GCSAMLQ5JQS6 135 aa6.92□□□□□ -1.3
CAPN3-216ENST00000567071 SPSB3Q6PJ21 355 aa6.92□□□□□ -1.3
CAPN3-216ENST00000567071 VSIRQ9H7M9 311 aa6.92□□□□□ -1.3
CAPN3-216ENST00000567071 SLC39A9Q9NUM3 307 aa6.92□□□□□ -1.3
CAPN3-216ENST00000567071 TIMM9Q9Y5J7 89 aa6.92□□□□□ -1.3
CAPN3-216ENST00000567071 ELOA3CA0A087WX78 387 aaPredicted RBP6.91□□□□□ -1.3
CAPN3-216ENST00000567071 KRTAP9-6A0A140TA67 174 aa6.91□□□□□ -1.3
CAPN3-216ENST00000567071 EIF3GO75821 320 aaKnown RBP eCLIP6.91□□□□□ -1.3
CAPN3-216ENST00000567071 YIF1AO95070 293 aa6.91□□□□□ -1.3
CAPN3-216ENST00000567071 IL4P05112 153 aa6.91□□□□□ -1.3
CAPN3-216ENST00000567071 SEC11BP0C7V7 166 aa6.91□□□□□ -1.3
CAPN3-216ENST00000567071 RD3LP0DJH9 198 aa6.91□□□□□ -1.3
CAPN3-216ENST00000567071 BTF3P20290 206 aaKnown RBP6.91□□□□□ -1.3
CAPN3-216ENST00000567071 RPL29P47914 159 aaKnown RBP6.91□□□□□ -1.3
CAPN3-216ENST00000567071 RAB2AP61019 212 aa6.91□□□□□ -1.3
CAPN3-216ENST00000567071 YPEL3P61236 119 aaPredicted RBP6.91□□□□□ -1.3
CAPN3-216ENST00000567071 SELENOTP62341 195 aa6.91□□□□□ -1.3
CAPN3-216ENST00000567071 IFITM2Q01629 132 aa6.91□□□□□ -1.3
CAPN3-216ENST00000567071 AKR1C8PQ5T2L2 129 aa6.91□□□□□ -1.3
CAPN3-216ENST00000567071 ZNF600Q6ZNG1 722 aa6.91□□□□□ -1.3
CAPN3-216ENST00000567071 OR51G1Q8NGK1 321 aa6.91□□□□□ -1.3
CAPN3-216ENST00000567071 RNF125Q96EQ8 232 aa6.91□□□□□ -1.3
CAPN3-216ENST00000567071 ZNF414Q96IQ9 312 aa6.91□□□□□ -1.3
CAPN3-216ENST00000567071 PBDC1Q9BVG4 233 aa6.91□□□□□ -1.3
CAPN3-216ENST00000567071 SCRT1Q9BWW7 348 aa6.91□□□□□ -1.3
CAPN3-216ENST00000567071 CELA1Q9UNI1 258 aa6.91□□□□□ -1.3
CAPN3-216ENST00000567071 PUS1Q9Y606 427 aaKnown RBP eCLIP6.91□□□□□ -1.3
CAPN3-216ENST00000567071 EREGO14944 169 aa6.9□□□□□ -1.3
CAPN3-216ENST00000567071 ZNF207O43670 478 aaKnown RBP6.9□□□□□ -1.3
CAPN3-216ENST00000567071 COX7A2P2O60397 106 aa6.9□□□□□ -1.3
CAPN3-216ENST00000567071 OR5G3P0C626 314 aa6.9□□□□□ -1.3
CAPN3-216ENST00000567071 ORM2P19652 201 aa6.9□□□□□ -1.3
CAPN3-216ENST00000567071 RELQ04864 619 aaPredicted RBP6.9□□□□□ -1.3
CAPN3-216ENST00000567071 ICAM4Q14773 271 aa6.9□□□□□ -1.3
CAPN3-216ENST00000567071 USF2Q15853 346 aaPredicted RBP6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms