RNA–Protein interactions for RNA: ENST00000565912.1

CX3CL1-204, Transcript of C-X3-C motif chemokine ligand 1, humanhuman

TSL 1 (best) BASIC

Gene CX3CL1, Length 5,796 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1-204ENST00000565912 CEACAM8P31997 349 aaPredicted RBP11.05□□□□□ -0.64
CX3CL1-204ENST00000565912 GAGE2BQ13066 116 aa11.05□□□□□ -0.64
CX3CL1-204ENST00000565912 FAM90A2PQ658T7 463 aa11.05□□□□□ -0.64
CX3CL1-204ENST00000565912 PNRC2Q9NPJ4 139 aaKnown RBP11.05□□□□□ -0.64
CX3CL1-204ENST00000565912 DKK1O94907 266 aa11.05□□□□□ -0.64
CX3CL1-204ENST00000565912 C1orf122Q6ZSJ8 110 aa11.05□□□□□ -0.64
CX3CL1-204ENST00000565912 HIST3H2BBQ8N257 126 aa11.05□□□□□ -0.64
CX3CL1-204ENST00000565912 E7EQL1 145 aa11.04□□□□□ -0.64
CX3CL1-204ENST00000565912 RASL11AQ6T310 242 aa11.04□□□□□ -0.64
CX3CL1-204ENST00000565912 AMN1Q8IY45 258 aa11.04□□□□□ -0.64
CX3CL1-204ENST00000565912 LY6G5BQ8NDX9 201 aa11.04□□□□□ -0.64
CX3CL1-204ENST00000565912 CYTL1Q9NRR1 136 aa11.04□□□□□ -0.64
CX3CL1-204ENST00000565912 LOC105371267A0A1B0GV96 52 aa11.04□□□□□ -0.64
CX3CL1-204ENST00000565912 Q6ZS92 163 aa11.04□□□□□ -0.64
CX3CL1-204ENST00000565912 RNF144BQ7Z419 303 aa11.04□□□□□ -0.64
CX3CL1-204ENST00000565912 LYPD1Q8N2G4 141 aa11.04□□□□□ -0.64
CX3CL1-204ENST00000565912 UBE2CO00762 179 aa11.04□□□□□ -0.64
CX3CL1-204ENST00000565912 TRAV1-1A0A0B4J248 108 aa11.03□□□□□ -0.64
CX3CL1-204ENST00000565912 A0A087X0K7 114 aa11.03□□□□□ -0.64
CX3CL1-204ENST00000565912 GAGE12JA6NER3 117 aa11.03□□□□□ -0.64
CX3CL1-204ENST00000565912 CLPSP04118 112 aa11.03□□□□□ -0.64
CX3CL1-204ENST00000565912 MSMBP08118 114 aa11.03□□□□□ -0.64
CX3CL1-204ENST00000565912 GAGE1Q13065 139 aa11.03□□□□□ -0.64
CX3CL1-204ENST00000565912 GAGE4Q13068 117 aa11.03□□□□□ -0.64
CX3CL1-204ENST00000565912 GAGE5Q13069 117 aa11.03□□□□□ -0.64
CX3CL1-204ENST00000565912 ZNF581Q9P0T4 197 aa11.03□□□□□ -0.64
CX3CL1-204ENST00000565912 ANK1P16157 1881 aa11.03□□□□□ -0.64
CX3CL1-204ENST00000565912 TNFRSF6BO95407 300 aa11.03□□□□□ -0.64
CX3CL1-204ENST00000565912 KLF12Q9Y4X4 402 aa11.03□□□□□ -0.64
CX3CL1-204ENST00000565912 ZNF561-AS1K7EIQ3 104 aa11.03□□□□□ -0.64
CX3CL1-204ENST00000565912 ARMS2P0C7Q2 107 aa11.03□□□□□ -0.64
CX3CL1-204ENST00000565912 RNASE2P10153 161 aaKnown RBP11.03□□□□□ -0.64
CX3CL1-204ENST00000565912 DAD1P61803 113 aa11.03□□□□□ -0.64
CX3CL1-204ENST00000565912 C17orf82Q86X59 251 aaPredicted RBP11.03□□□□□ -0.64
CX3CL1-204ENST00000565912 EDA2RQ9HAV5 297 aa11.03□□□□□ -0.64
CX3CL1-204ENST00000565912 IGKV1-16P04430 117 aa11.03□□□□□ -0.64
CX3CL1-204ENST00000565912 ESDP10768 282 aa11.03□□□□□ -0.64
CX3CL1-204ENST00000565912 IGHV3-16A0A0C4DH30 117 aa11.02□□□□□ -0.64
CX3CL1-204ENST00000565912 TMEM256Q8N2U0 113 aa11.02□□□□□ -0.64
CX3CL1-204ENST00000565912 DOCK6Q96HP0 2047 aa11.02□□□□□ -0.64
CX3CL1-204ENST00000565912 CACNA1DQ01668 2161 aa11.02□□□□□ -0.64
CX3CL1-204ENST00000565912 ZC2HC1BQ5TFG8 222 aa11.02□□□□□ -0.65
CX3CL1-204ENST00000565912 NEUROG3Q9Y4Z2 214 aa11.02□□□□□ -0.65
CX3CL1-204ENST00000565912 SPTBN2O15020 2390 aa11.02□□□□□ -0.65
CX3CL1-204ENST00000565912 GATA4P43694 442 aa11.02□□□□□ -0.65
CX3CL1-204ENST00000565912 PRR30Q53SZ7 412 aaPredicted RBP11.02□□□□□ -0.65
CX3CL1-204ENST00000565912 IL17RELQ6ZVW7 336 aa11.02□□□□□ -0.65
CX3CL1-204ENST00000565912 MCRIP2Q9BUT9 160 aaKnown RBP11.02□□□□□ -0.65
CX3CL1-204ENST00000565912 C15orf62A8K5M9 175 aa11.02□□□□□ -0.65
CX3CL1-204ENST00000565912 GAS1P54826 345 aa11.02□□□□□ -0.65
CX3CL1-204ENST00000565912 ZFAND6Q6FIF0 208 aa11.01□□□□□ -0.65
CX3CL1-204ENST00000565912 DNAJC30Q96LL9 226 aa11.01□□□□□ -0.65
CX3CL1-204ENST00000565912 ZNRD1Q9P1U0 126 aa11.01□□□□□ -0.65
CX3CL1-204ENST00000565912 ATP6V0E1O15342 81 aa11.01□□□□□ -0.65
CX3CL1-204ENST00000565912 GAGE2AQ6NT46 116 aa11.01□□□□□ -0.65
CX3CL1-204ENST00000565912 OVOL2Q9BRP0 275 aa11.01□□□□□ -0.65
CX3CL1-204ENST00000565912 B3GALT5-AS1P59052 145 aa11.01□□□□□ -0.65
CX3CL1-204ENST00000565912 LINC01619G3V211 115 aa11.01□□□□□ -0.65
CX3CL1-204ENST00000565912 NDUFS8O00217 210 aa11.01□□□□□ -0.65
CX3CL1-204ENST00000565912 IGHG3P01860 377 aa11.01□□□□□ -0.65
CX3CL1-204ENST00000565912 SPINK13Q1W4C9 94 aa11.01□□□□□ -0.65
CX3CL1-204ENST00000565912 Q71RC1 249 aaPredicted RBP11.01□□□□□ -0.65
CX3CL1-204ENST00000565912 TRPT1Q86TN4 253 aaKnown RBP11.01□□□□□ -0.65
CX3CL1-204ENST00000565912 Q96MF0 132 aa11.01□□□□□ -0.65
CX3CL1-204ENST00000565912 DOCK4Q8N1I0 1966 aa11.01□□□□□ -0.65
CX3CL1-204ENST00000565912 Q86TA4 180 aa11.01□□□□□ -0.65
CX3CL1-204ENST00000565912 ZNF114Q8NC26 417 aa11.01□□□□□ -0.65
CX3CL1-204ENST00000565912 SHANK2-AS3Q9BTD1 123 aa11.01□□□□□ -0.65
CX3CL1-204ENST00000565912 TRBV6-6A0A0A6YYG2 114 aa11□□□□□ -0.65
CX3CL1-204ENST00000565912 KLK9Q9UKQ9 250 aa11□□□□□ -0.65
CX3CL1-204ENST00000565912 COLCA2A8K830 154 aa11□□□□□ -0.65
CX3CL1-204ENST00000565912 C3orf79P0CE67 100 aa11□□□□□ -0.65
CX3CL1-204ENST00000565912 DLX4Q92988 240 aaPredicted RBP11□□□□□ -0.65
CX3CL1-204ENST00000565912 COL4A6Q14031 1691 aa11□□□□□ -0.65
CX3CL1-204ENST00000565912 LINC00479Q96M42 142 aa11□□□□□ -0.65
CX3CL1-204ENST00000565912 SNHG12Q9BXW3 62 aa11□□□□□ -0.65
CX3CL1-204ENST00000565912 TMEM126AQ9H061 195 aa11□□□□□ -0.65
CX3CL1-204ENST00000565912 SIP14410 1827 aa11□□□□□ -0.65
CX3CL1-204ENST00000565912 SYS1-DBNDD2H3BUS1 97 aa11□□□□□ -0.65
CX3CL1-204ENST00000565912 FAM110DQ8TAY7 271 aaPredicted RBP11□□□□□ -0.65
CX3CL1-204ENST00000565912 CGB3P0DN86 165 aa10.99□□□□□ -0.65
CX3CL1-204ENST00000565912 A0A1B0GW64 132 aa10.99□□□□□ -0.65
CX3CL1-204ENST00000565912 LY96Q9Y6Y9 160 aa10.99□□□□□ -0.65
CX3CL1-204ENST00000565912 ZSWIM8A7E2V4 1837 aa10.99□□□□□ -0.65
CX3CL1-204ENST00000565912 A0A0G2JRQ6 117 aa10.99□□□□□ -0.65
CX3CL1-204ENST00000565912 A0A1W2PPI3 338 aa10.99□□□□□ -0.65
CX3CL1-204ENST00000565912 UBE2E1P51965 193 aa10.99□□□□□ -0.65
CX3CL1-204ENST00000565912 PMVKQ15126 192 aa10.98□□□□□ -0.65
CX3CL1-204ENST00000565912 MPV17L2Q567V2 206 aa10.98□□□□□ -0.65
CX3CL1-204ENST00000565912 SUMO4Q6EEV6 95 aa10.98□□□□□ -0.65
CX3CL1-204ENST00000565912 SPTBN1Q01082 2364 aaKnown RBP10.98□□□□□ -0.65
CX3CL1-204ENST00000565912 GATA3P23771 443 aa10.98□□□□□ -0.65
CX3CL1-204ENST00000565912 PFN2P35080 140 aa10.98□□□□□ -0.65
CX3CL1-204ENST00000565912 TRBV25-1A0A075B6N4 114 aa10.97□□□□□ -0.65
CX3CL1-204ENST00000565912 NDUFB8O95169 186 aa10.97□□□□□ -0.65
CX3CL1-204ENST00000565912 NKAPP1Q8N9T2 125 aa10.97□□□□□ -0.65
CX3CL1-204ENST00000565912 SRSF8Q9BRL6 282 aaKnown RBP10.97□□□□□ -0.65
CX3CL1-204ENST00000565912 CNOT1A5YKK6 2376 aaKnown RBP10.97□□□□□ -0.65
CX3CL1-204ENST00000565912 IGHV1-69DA0A0B4J2H0 117 aa10.97□□□□□ -0.65
CX3CL1-204ENST00000565912 G3V318 75 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms