RNA–Protein interactions for RNA: ENST00000565511.5

RAB40C-209, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 783 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-209ENST00000565511 MORN5Q5VZ52 161 aa16.76■□□□□ 0.27
RAB40C-209ENST00000565511 Q6ZR54 194 aa16.76■□□□□ 0.27
RAB40C-209ENST00000565511 OR8A1Q8NGG7 326 aa16.76■□□□□ 0.27
RAB40C-209ENST00000565511 ARV1Q9H2C2 271 aa16.76■□□□□ 0.27
RAB40C-209ENST00000565511 NPVFQ9HCQ7 196 aa16.76■□□□□ 0.27
RAB40C-209ENST00000565511 PCLOQ9Y6V0 5065 aa16.75■□□□□ 0.27
RAB40C-209ENST00000565511 C7orf66A4D0T2 115 aa16.75■□□□□ 0.27
RAB40C-209ENST00000565511 FNDC10F2Z333 226 aa16.75■□□□□ 0.27
RAB40C-209ENST00000565511 FCN2Q15485 313 aa16.75■□□□□ 0.27
RAB40C-209ENST00000565511 PSG3Q16557 428 aa16.75■□□□□ 0.27
RAB40C-209ENST00000565511 UBE2DNLQ8IWF7 75 aa16.75■□□□□ 0.27
RAB40C-209ENST00000565511 OR10P1Q8NGE3 313 aa16.75■□□□□ 0.27
RAB40C-209ENST00000565511 C20orf85Q9H1P6 137 aa16.75■□□□□ 0.27
RAB40C-209ENST00000565511 S100A7P31151 101 aa16.74■□□□□ 0.27
RAB40C-209ENST00000565511 TAS2R30P59541 319 aa16.74■□□□□ 0.27
RAB40C-209ENST00000565511 LGALS9BQ3B8N2 356 aa16.74■□□□□ 0.27
RAB40C-209ENST00000565511 TEPPQ6URK8 271 aa16.74■□□□□ 0.27
RAB40C-209ENST00000565511 MGST2Q99735 147 aa16.74■□□□□ 0.27
RAB40C-209ENST00000565511 MGAT4CQ9UBM8 478 aa16.74■□□□□ 0.27
RAB40C-209ENST00000565511 PRSS29PA6NIE9 313 aa16.73■□□□□ 0.27
RAB40C-209ENST00000565511 H3BTX0 84 aa16.73■□□□□ 0.27
RAB40C-209ENST00000565511 AGPAT2O15120 278 aa16.73■□□□□ 0.27
RAB40C-209ENST00000565511 C11orf1Q9H5F2 150 aa16.73■□□□□ 0.27
RAB40C-209ENST00000565511 CENPXA8MT69 81 aa16.72■□□□□ 0.27
RAB40C-209ENST00000565511 SLC17A3O00476 420 aa16.72■□□□□ 0.27
RAB40C-209ENST00000565511 KIR3DS1Q14943 382 aa16.72■□□□□ 0.27
RAB40C-209ENST00000565511 TMEM37Q8WXS4 190 aa16.72■□□□□ 0.27
RAB40C-209ENST00000565511 SEC22CQ9BRL7 303 aa16.72■□□□□ 0.27
RAB40C-209ENST00000565511 PARD6GQ9BYG4 376 aaPredicted RBP16.72■□□□□ 0.27
RAB40C-209ENST00000565511 PRAC2D3DTV9 90 aa16.71■□□□□ 0.27
RAB40C-209ENST00000565511 DEFB130BP0DP73 79 aa16.71■□□□□ 0.27
RAB40C-209ENST00000565511 DEFB130AP0DP74 79 aa16.71■□□□□ 0.27
RAB40C-209ENST00000565511 RHOBP62745 196 aa16.71■□□□□ 0.27
RAB40C-209ENST00000565511 LINC00305Q7Z4B0 112 aa16.71■□□□□ 0.27
RAB40C-209ENST00000565511 ZNF546Q86UE3 836 aa16.71■□□□□ 0.27
RAB40C-209ENST00000565511 RPUSD4Q96CM3 377 aaKnown RBP16.71■□□□□ 0.27
RAB40C-209ENST00000565511 LYRM9A8MSI8 78 aa16.7■□□□□ 0.26
RAB40C-209ENST00000565511 TSPOP30536 169 aa16.7■□□□□ 0.26
RAB40C-209ENST00000565511 OPCMLQ14982 345 aa16.7■□□□□ 0.26
RAB40C-209ENST00000565511 ZNF331Q9NQX6 463 aaPredicted RBP16.7■□□□□ 0.26
RAB40C-209ENST00000565511 LSM5Q9Y4Y9 91 aaKnown RBP16.7■□□□□ 0.26
RAB40C-209ENST00000565511 TRAV6A0A075B6T7 132 aa16.69■□□□□ 0.26
RAB40C-209ENST00000565511 GOSR2O14653 212 aa16.69■□□□□ 0.26
RAB40C-209ENST00000565511 LYRM1O43325 122 aa16.69■□□□□ 0.26
RAB40C-209ENST00000565511 LRRC20Q8TCA0 184 aa16.69■□□□□ 0.26
RAB40C-209ENST00000565511 RNF212Q495C1 297 aa16.68■□□□□ 0.26
RAB40C-209ENST00000565511 LINC01587Q99440 93 aa16.68■□□□□ 0.26
RAB40C-209ENST00000565511 GGACTQ9BVM4 153 aa16.68■□□□□ 0.26
RAB40C-209ENST00000565511 RYR1P21817 5038 aa16.67■□□□□ 0.26
RAB40C-209ENST00000565511 H3BQ15 152 aa16.67■□□□□ 0.26
RAB40C-209ENST00000565511 COX7A2P2O60397 106 aa16.67■□□□□ 0.26
RAB40C-209ENST00000565511 TCRBP04435 133 aa16.67■□□□□ 0.26
RAB40C-209ENST00000565511 PXDC1Q5TGL8 231 aa16.67■□□□□ 0.26
RAB40C-209ENST00000565511 LCN15Q6UWW0 184 aa16.67■□□□□ 0.26
RAB40C-209ENST00000565511 TRAV5A0A0B4J249 113 aa16.66■□□□□ 0.26
RAB40C-209ENST00000565511 FAM24AA6NFZ4 105 aa16.66■□□□□ 0.26
RAB40C-209ENST00000565511 FAM25EA8MYX2 175 aa16.66■□□□□ 0.26
RAB40C-209ENST00000565511 CST7O76096 145 aa16.66■□□□□ 0.26
RAB40C-209ENST00000565511 IGLC2P0DOY2 106 aa16.66■□□□□ 0.26
RAB40C-209ENST00000565511 CXCL2P19875 107 aa16.66■□□□□ 0.26
RAB40C-209ENST00000565511 B2MP61769 119 aa16.66■□□□□ 0.26
RAB40C-209ENST00000565511 MIC13Q5XKP0 118 aa16.66■□□□□ 0.26
RAB40C-209ENST00000565511 HTN1P15515 57 aa16.65■□□□□ 0.26
RAB40C-209ENST00000565511 TAS2R60P59551 318 aa16.65■□□□□ 0.26
RAB40C-209ENST00000565511 ZNF431Q8TF32 576 aaPredicted RBP16.65■□□□□ 0.26
RAB40C-209ENST00000565511 NUDT15Q9NV35 164 aa16.65■□□□□ 0.26
RAB40C-209ENST00000565511 PPP1R14DQ9NXH3 145 aa16.65■□□□□ 0.26
RAB40C-209ENST00000565511 F5H768 121 aa16.64■□□□□ 0.25
RAB40C-209ENST00000565511 L7N2F9 121 aa16.64■□□□□ 0.25
RAB40C-209ENST00000565511 CDKN1BP46527 198 aa16.64■□□□□ 0.25
RAB40C-209ENST00000565511 VAMP2P63027 116 aa16.64■□□□□ 0.25
RAB40C-209ENST00000565511 CNPY1Q3B7I2 92 aa16.64■□□□□ 0.25
RAB40C-209ENST00000565511 C10orf113Q5VZT2 155 aa16.64■□□□□ 0.25
RAB40C-209ENST00000565511 NRARPQ7Z6K4 114 aa16.64■□□□□ 0.25
RAB40C-209ENST00000565511 TMEM256Q8N2U0 113 aa16.64■□□□□ 0.25
RAB40C-209ENST00000565511 C15orf53Q8NAA6 179 aa16.64■□□□□ 0.25
RAB40C-209ENST00000565511 RNASE8Q8TDE3 154 aaKnown RBP16.64■□□□□ 0.25
RAB40C-209ENST00000565511 SAT2Q96F10 170 aaPredicted RBP16.64■□□□□ 0.25
RAB40C-209ENST00000565511 SLC50A1Q9BRV3 221 aa16.64■□□□□ 0.25
RAB40C-209ENST00000565511 IGSF23A1L1A6 192 aa16.63■□□□□ 0.25
RAB40C-209ENST00000565511 CAMLGP49069 296 aa16.63■□□□□ 0.25
RAB40C-209ENST00000565511 BCAP31P51572 246 aa16.63■□□□□ 0.25
RAB40C-209ENST00000565511 CAV2P51636 162 aa16.63■□□□□ 0.25
RAB40C-209ENST00000565511 ZNF846Q147U1 533 aa16.63■□□□□ 0.25
RAB40C-209ENST00000565511 GFI1BQ5VTD9 330 aa16.63■□□□□ 0.25
RAB40C-209ENST00000565511 S100A7AQ86SG5 101 aa16.63■□□□□ 0.25
RAB40C-209ENST00000565511 BPIFA4PQ86YQ2 179 aa16.63■□□□□ 0.25
RAB40C-209ENST00000565511 C5orf51A6NDU8 294 aa16.62■□□□□ 0.25
RAB40C-209ENST00000565511 IL15RAQ13261 267 aa16.62■□□□□ 0.25
RAB40C-209ENST00000565511 C16orf74Q96GX8 76 aa16.62■□□□□ 0.25
RAB40C-209ENST00000565511 NOP10Q9NPE3 64 aaKnown RBP16.62■□□□□ 0.25
RAB40C-209ENST00000565511 WDR83OSQ9Y284 106 aa16.62■□□□□ 0.25
RAB40C-209ENST00000565511 MUC4Q99102 2169 aa16.62■□□□□ 0.25
RAB40C-209ENST00000565511 VWC2Q2TAL6 325 aa16.61■□□□□ 0.25
RAB40C-209ENST00000565511 C12orf45Q8N5I9 185 aaPredicted RBP16.61■□□□□ 0.25
RAB40C-209ENST00000565511 C2orf50Q96LR7 162 aa16.61■□□□□ 0.25
RAB40C-209ENST00000565511 UBE2L5PA0A1B0GUS4 154 aa16.6■□□□□ 0.25
RAB40C-209ENST00000565511 NUDT3O95989 172 aa16.6■□□□□ 0.25
RAB40C-209ENST00000565511 ATP5G1P05496 136 aa16.6■□□□□ 0.25
RAB40C-209ENST00000565511 ATP5G3P48201 142 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 78.2 ms