RNA–Protein interactions for RNA: ENST00000565393.2

TCF4-228, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 314 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-228ENST00000565393 PATE2Q6UY27 113 aa4.56□□□□□ -1.68
TCF4-228ENST00000565393 Q6ZRG5 221 aa4.56□□□□□ -1.68
TCF4-228ENST00000565393 LINC00336Q6ZUF6 198 aa4.56□□□□□ -1.68
TCF4-228ENST00000565393 LINC00305Q7Z4B0 112 aa4.56□□□□□ -1.68
TCF4-228ENST00000565393 BPIFA4PQ86YQ2 179 aa4.56□□□□□ -1.68
TCF4-228ENST00000565393 BAP18Q8IXM2 172 aa4.56□□□□□ -1.68
TCF4-228ENST00000565393 OR8A1Q8NGG7 326 aa4.56□□□□□ -1.68
TCF4-228ENST00000565393 RPUSD4Q96CM3 377 aaKnown RBP4.56□□□□□ -1.68
TCF4-228ENST00000565393 SDHCQ99643 169 aaPredicted RBP4.56□□□□□ -1.68
TCF4-228ENST00000565393 ATG101Q9BSB4 218 aa4.56□□□□□ -1.68
TCF4-228ENST00000565393 GGACTQ9BVM4 153 aa4.56□□□□□ -1.68
TCF4-228ENST00000565393 DNAJC4Q9NNZ3 241 aa4.56□□□□□ -1.68
TCF4-228ENST00000565393 NDUFA13Q9P0J0 144 aa4.56□□□□□ -1.68
TCF4-228ENST00000565393 EPPK1P58107 5090 aaKnown RBP4.55□□□□□ -1.68
TCF4-228ENST00000565393 FAM24AA6NFZ4 105 aa4.55□□□□□ -1.68
TCF4-228ENST00000565393 CBY3A6NI87 242 aa4.55□□□□□ -1.68
TCF4-228ENST00000565393 LYRM9A8MSI8 78 aa4.55□□□□□ -1.68
TCF4-228ENST00000565393 H3BTX0 84 aa4.55□□□□□ -1.68
TCF4-228ENST00000565393 BOLA2-SMG1P6H3BVE0 249 aa4.55□□□□□ -1.68
TCF4-228ENST00000565393 CRXO43186 299 aaPredicted RBP4.55□□□□□ -1.68
TCF4-228ENST00000565393 LYRM1O43325 122 aa4.55□□□□□ -1.68
TCF4-228ENST00000565393 CST7O76096 145 aa4.55□□□□□ -1.68
TCF4-228ENST00000565393 NUDT3O95989 172 aa4.55□□□□□ -1.68
TCF4-228ENST00000565393 H2AFB2P0C5Z0 115 aa4.55□□□□□ -1.68
TCF4-228ENST00000565393 PVALBP20472 110 aaPredicted RBP4.55□□□□□ -1.68
TCF4-228ENST00000565393 BTCP35070 178 aa4.55□□□□□ -1.68
TCF4-228ENST00000565393 CAMLGP49069 296 aa4.55□□□□□ -1.68
TCF4-228ENST00000565393 TAS2R60P59551 318 aa4.55□□□□□ -1.68
TCF4-228ENST00000565393 RNF212Q495C1 297 aa4.55□□□□□ -1.68
TCF4-228ENST00000565393 NRARPQ7Z6K4 114 aa4.55□□□□□ -1.68
TCF4-228ENST00000565393 ZNF546Q86UE3 836 aa4.55□□□□□ -1.68
TCF4-228ENST00000565393 CCDC28AQ8IWP9 274 aa4.55□□□□□ -1.68
TCF4-228ENST00000565393 C12orf45Q8N5I9 185 aaPredicted RBP4.55□□□□□ -1.68
TCF4-228ENST00000565393 OR10J6PQ8NGY7 276 aa4.55□□□□□ -1.68
TCF4-228ENST00000565393 ZNF431Q8TF32 576 aaPredicted RBP4.55□□□□□ -1.68
TCF4-228ENST00000565393 ARPC5LQ9BPX5 153 aa4.55□□□□□ -1.68
TCF4-228ENST00000565393 SEC22CQ9BRL7 303 aa4.55□□□□□ -1.68
TCF4-228ENST00000565393 C20orf85Q9H1P6 137 aa4.55□□□□□ -1.68
TCF4-228ENST00000565393 A0A087X0K7 114 aa4.54□□□□□ -1.68
TCF4-228ENST00000565393 TRAV5A0A0B4J249 113 aa4.54□□□□□ -1.68
TCF4-228ENST00000565393 A8MTW9 85 aa4.54□□□□□ -1.68
TCF4-228ENST00000565393 K7EPK0 472 aa4.54□□□□□ -1.68
TCF4-228ENST00000565393 TSPOP30536 169 aa4.54□□□□□ -1.68
TCF4-228ENST00000565393 S100A11P31949 105 aa4.54□□□□□ -1.68
TCF4-228ENST00000565393 CDKN1BP46527 198 aa4.54□□□□□ -1.68
TCF4-228ENST00000565393 S100A10P60903 97 aa4.54□□□□□ -1.68
TCF4-228ENST00000565393 OR5I1Q13606 314 aa4.54□□□□□ -1.68
TCF4-228ENST00000565393 LGALS9BQ3B8N2 356 aa4.54□□□□□ -1.68
TCF4-228ENST00000565393 SOHLH1Q5JUK2 328 aa4.54□□□□□ -1.68
TCF4-228ENST00000565393 MIC13Q5XKP0 118 aa4.54□□□□□ -1.68
TCF4-228ENST00000565393 TMEM256Q8N2U0 113 aa4.54□□□□□ -1.68
TCF4-228ENST00000565393 OR1L4Q8NGR5 311 aa4.54□□□□□ -1.68
TCF4-228ENST00000565393 TMEM37Q8WXS4 190 aa4.54□□□□□ -1.68
TCF4-228ENST00000565393 C2orf50Q96LR7 162 aa4.54□□□□□ -1.68
TCF4-228ENST00000565393 MGST2Q99735 147 aa4.54□□□□□ -1.68
TCF4-228ENST00000565393 NOP10Q9NPE3 64 aaKnown RBP4.54□□□□□ -1.68
TCF4-228ENST00000565393 ZNF331Q9NQX6 463 aaPredicted RBP4.54□□□□□ -1.68
TCF4-228ENST00000565393 BATF3Q9NR55 127 aa4.54□□□□□ -1.68
TCF4-228ENST00000565393 NUDT15Q9NV35 164 aa4.54□□□□□ -1.68
TCF4-228ENST00000565393 UQCC1Q9NVA1 299 aa4.54□□□□□ -1.68
TCF4-228ENST00000565393 TIMM8BQ9Y5J9 83 aaPredicted RBP4.54□□□□□ -1.68
TCF4-228ENST00000565393 FAM240BA0A1B0GVZ2 78 aa4.53□□□□□ -1.68
TCF4-228ENST00000565393 PRAC2D3DTV9 90 aa4.53□□□□□ -1.68
TCF4-228ENST00000565393 H3BQ15 152 aa4.53□□□□□ -1.68
TCF4-228ENST00000565393 H7BYZ3 331 aa4.53□□□□□ -1.68
TCF4-228ENST00000565393 J3KRW8 73 aa4.53□□□□□ -1.68
TCF4-228ENST00000565393 MRPS12O15235 138 aaKnown RBP4.53□□□□□ -1.68
TCF4-228ENST00000565393 RLN2P04090 185 aa4.53□□□□□ -1.68
TCF4-228ENST00000565393 ATP5G1P05496 136 aa4.53□□□□□ -1.68
TCF4-228ENST00000565393 ATP5G3P48201 142 aa4.53□□□□□ -1.68
TCF4-228ENST00000565393 BAXQ07812 192 aa4.53□□□□□ -1.68
TCF4-228ENST00000565393 CLINT1Q14677 625 aa4.53□□□□□ -1.68
TCF4-228ENST00000565393 OPCMLQ14982 345 aa4.53□□□□□ -1.68
TCF4-228ENST00000565393 C1orf134Q5TEV5 83 aa4.53□□□□□ -1.68
TCF4-228ENST00000565393 MORN5Q5VZ52 161 aa4.53□□□□□ -1.68
TCF4-228ENST00000565393 MZT2BQ6NZ67 158 aa4.53□□□□□ -1.68
TCF4-228ENST00000565393 LCN15Q6UWW0 184 aa4.53□□□□□ -1.68
TCF4-228ENST00000565393 C15orf53Q8NAA6 179 aa4.53□□□□□ -1.68
TCF4-228ENST00000565393 SLC50A1Q9BRV3 221 aa4.53□□□□□ -1.68
TCF4-228ENST00000565393 TIMM9Q9Y5J7 89 aa4.53□□□□□ -1.68
TCF4-228ENST00000565393 TRAV12-3A0A0B4J271 114 aa4.52□□□□□ -1.69
TCF4-228ENST00000565393 RTL8CO15255 209 aa4.52□□□□□ -1.69
TCF4-228ENST00000565393 CXCL2P19875 107 aa4.52□□□□□ -1.69
TCF4-228ENST00000565393 LEPP41159 167 aa4.52□□□□□ -1.69
TCF4-228ENST00000565393 RPL29P47914 159 aaKnown RBP4.52□□□□□ -1.69
TCF4-228ENST00000565393 SULT1A1P50225 295 aa4.52□□□□□ -1.69
TCF4-228ENST00000565393 CCL18P55774 89 aa4.52□□□□□ -1.69
TCF4-228ENST00000565393 HBG1P69891 147 aa4.52□□□□□ -1.69
TCF4-228ENST00000565393 HBG2P69892 147 aa4.52□□□□□ -1.69
TCF4-228ENST00000565393 RAB32Q13637 225 aa4.52□□□□□ -1.69
TCF4-228ENST00000565393 GUK1Q16774 197 aa4.52□□□□□ -1.69
TCF4-228ENST00000565393 ATP6V1FQ16864 119 aa4.52□□□□□ -1.69
TCF4-228ENST00000565393 ZNF493Q6ZR52 646 aa4.52□□□□□ -1.69
TCF4-228ENST00000565393 STX12Q86Y82 276 aa4.52□□□□□ -1.69
TCF4-228ENST00000565393 TMEM252Q8N6L7 170 aa4.52□□□□□ -1.69
TCF4-228ENST00000565393 SAT2Q96F10 170 aaPredicted RBP4.52□□□□□ -1.69
TCF4-228ENST00000565393 C16orf74Q96GX8 76 aa4.52□□□□□ -1.69
TCF4-228ENST00000565393 PFDN5Q99471 154 aa4.52□□□□□ -1.69
TCF4-228ENST00000565393 CCDC32Q9BV29 185 aa4.52□□□□□ -1.69
TCF4-228ENST00000565393 PARD6GQ9BYG4 376 aaPredicted RBP4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms