RNA–Protein interactions for RNA: ENST00000565038.1

PALB2-203, Transcript of partner and localizer of BRCA2, humanhuman

TSL 3

Gene PALB2, Length 344 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-203ENST00000565038 DIRAS2Q96HU8 199 aa1.12□□□□□ -2.23
PALB2-203ENST00000565038 SLC35G5Q96KT7 338 aa1.12□□□□□ -2.23
PALB2-203ENST00000565038 PPP1R2P1Q96PQ5 205 aa1.12□□□□□ -2.23
PALB2-203ENST00000565038 WFDC6Q9BQY6 131 aa1.12□□□□□ -2.23
PALB2-203ENST00000565038 DOHHQ9BU89 302 aa1.12□□□□□ -2.23
PALB2-203ENST00000565038 C20orf27Q9GZN8 174 aa1.12□□□□□ -2.23
PALB2-203ENST00000565038 PCBD2Q9H0N5 130 aa1.12□□□□□ -2.23
PALB2-203ENST00000565038 OR51I1Q9H343 314 aa1.12□□□□□ -2.23
PALB2-203ENST00000565038 OPTCQ9UBM4 332 aa1.12□□□□□ -2.23
PALB2-203ENST00000565038 PCTPQ9UKL6 214 aa1.12□□□□□ -2.23
PALB2-203ENST00000565038 ANAPC10Q9UM13 185 aa1.12□□□□□ -2.23
PALB2-203ENST00000565038 PXMP4Q9Y6I8 212 aa1.12□□□□□ -2.23
PALB2-203ENST00000565038 INTS1Q8N201 2190 aaKnown RBP1.12□□□□□ -2.23
PALB2-203ENST00000565038 NINQ8N4C6 2090 aa1.12□□□□□ -2.23
PALB2-203ENST00000565038 DNAH7Q8WXX0 4024 aa1.12□□□□□ -2.23
PALB2-203ENST00000565038 DNAJC13O75165 2243 aa1.12□□□□□ -2.23
PALB2-203ENST00000565038 CADP27708 2225 aa1.11□□□□□ -2.23
PALB2-203ENST00000565038 KIAA1109Q2LD37 5005 aa1.11□□□□□ -2.23
PALB2-203ENST00000565038 PKD1L1Q8TDX9 2849 aa1.11□□□□□ -2.23
PALB2-203ENST00000565038 A0A1W2PQD3 144 aa1.11□□□□□ -2.23
PALB2-203ENST00000565038 TMEM235A6NFC5 223 aa1.11□□□□□ -2.23
PALB2-203ENST00000565038 SMIM23A6NLE4 172 aa1.11□□□□□ -2.23
PALB2-203ENST00000565038 EEF1E1-BLOC1S5C9J1V9 151 aa1.11□□□□□ -2.23
PALB2-203ENST00000565038 TGOLN2O43493 480 aa1.11□□□□□ -2.23
PALB2-203ENST00000565038 RPS17P08708 135 aaKnown RBP1.11□□□□□ -2.23
PALB2-203ENST00000565038 C8orf88P0DMB2 117 aa1.11□□□□□ -2.23
PALB2-203ENST00000565038 MYL12AP19105 171 aa1.11□□□□□ -2.23
PALB2-203ENST00000565038 ALDH3A1P30838 453 aa1.11□□□□□ -2.23
PALB2-203ENST00000565038 MAGEA12P43365 314 aa1.11□□□□□ -2.23
PALB2-203ENST00000565038 XCL1P47992 114 aa1.11□□□□□ -2.23
PALB2-203ENST00000565038 RAP1GDS1P52306 607 aa1.11□□□□□ -2.23
PALB2-203ENST00000565038 ERHP84090 104 aaKnown RBP1.11□□□□□ -2.23
PALB2-203ENST00000565038 HOXC5Q00444 222 aa1.11□□□□□ -2.23
PALB2-203ENST00000565038 FABP9Q0Z7S8 132 aa1.11□□□□□ -2.23
PALB2-203ENST00000565038 BATFQ16520 125 aa1.11□□□□□ -2.23
PALB2-203ENST00000565038 PLPPR5Q32ZL2 321 aa1.11□□□□□ -2.23
PALB2-203ENST00000565038 SPRNQ5BIV9 151 aa1.11□□□□□ -2.23
PALB2-203ENST00000565038 HIST2H3PS2Q5TEC6 136 aa1.11□□□□□ -2.23
PALB2-203ENST00000565038 C5orf46Q6UWT4 87 aa1.11□□□□□ -2.23
PALB2-203ENST00000565038 LHFPL1Q86WI0 220 aa1.11□□□□□ -2.23
PALB2-203ENST00000565038 C10orf67Q8IYJ2 551 aa1.11□□□□□ -2.23
PALB2-203ENST00000565038 CLECL1Q8IZS7 167 aa1.11□□□□□ -2.23
PALB2-203ENST00000565038 C4orf33Q8N1A6 199 aa1.11□□□□□ -2.23
PALB2-203ENST00000565038 MMGT1Q8N4V1 131 aa1.11□□□□□ -2.23
PALB2-203ENST00000565038 TBC1D19Q8N5T2 526 aa1.11□□□□□ -2.23
PALB2-203ENST00000565038 MNS1Q8NEH6 495 aa1.11□□□□□ -2.23
PALB2-203ENST00000565038 OR51T1Q8NGJ9 327 aa1.11□□□□□ -2.23
PALB2-203ENST00000565038 CDC26Q8NHZ8 85 aa1.11□□□□□ -2.23
PALB2-203ENST00000565038 RNF133Q8WVZ7 376 aa1.11□□□□□ -2.23
PALB2-203ENST00000565038 ANKRD7Q92527 254 aa1.11□□□□□ -2.23
PALB2-203ENST00000565038 PTH2Q96A98 100 aa1.11□□□□□ -2.23
PALB2-203ENST00000565038 PPP1R14BQ96C90 147 aa1.11□□□□□ -2.23
PALB2-203ENST00000565038 GNPNAT1Q96EK6 184 aaPredicted RBP1.11□□□□□ -2.23
PALB2-203ENST00000565038 TEX37Q96LM6 180 aa1.11□□□□□ -2.23
PALB2-203ENST00000565038 SERPINI1Q99574 410 aa1.11□□□□□ -2.23
PALB2-203ENST00000565038 CCL13Q99616 98 aa1.11□□□□□ -2.23
PALB2-203ENST00000565038 EFCAB11Q9BUY7 163 aa1.11□□□□□ -2.23
PALB2-203ENST00000565038 REG4Q9BYZ8 158 aa1.11□□□□□ -2.23
PALB2-203ENST00000565038 OR51I2Q9H344 312 aa1.11□□□□□ -2.23
PALB2-203ENST00000565038 POPDC3Q9HBV1 291 aa1.11□□□□□ -2.23
PALB2-203ENST00000565038 NDUFB11Q9NX14 153 aa1.11□□□□□ -2.23
PALB2-203ENST00000565038 VPS29Q9UBQ0 182 aa1.11□□□□□ -2.23
PALB2-203ENST00000565038 LSM5Q9Y4Y9 91 aaKnown RBP1.11□□□□□ -2.23
PALB2-203ENST00000565038 DSCAMO60469 2012 aa1.11□□□□□ -2.23
PALB2-203ENST00000565038 TGP01266 2768 aa1.11□□□□□ -2.23
PALB2-203ENST00000565038 NBEAL2Q6ZNJ1 2754 aa1.11□□□□□ -2.23
PALB2-203ENST00000565038 MGAM2Q2M2H8 2515 aa1.11□□□□□ -2.23
PALB2-203ENST00000565038 NSD1Q96L73 2696 aaPredicted RBP1.11□□□□□ -2.23
PALB2-203ENST00000565038 EML6Q6ZMW3 1958 aa1.1□□□□□ -2.23
PALB2-203ENST00000565038 DNAH8Q96JB1 4490 aa1.1□□□□□ -2.23
PALB2-203ENST00000565038 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP1.1□□□□□ -2.231e-15■■■■■ 58.2
PALB2-203ENST00000565038 A0A096LNT2 108 aa1.1□□□□□ -2.23
PALB2-203ENST00000565038 A0A1B0GVG6 124 aa1.1□□□□□ -2.23
PALB2-203ENST00000565038 ACOX3O15254 700 aa1.1□□□□□ -2.23
PALB2-203ENST00000565038 TPST1O60507 370 aa1.1□□□□□ -2.23
PALB2-203ENST00000565038 SMIM24O75264 130 aa1.1□□□□□ -2.23
PALB2-203ENST00000565038 LYZL6O75951 148 aa1.1□□□□□ -2.23
PALB2-203ENST00000565038 IFNA5P01569 189 aa1.1□□□□□ -2.23
PALB2-203ENST00000565038 ISG15P05161 165 aa1.1□□□□□ -2.23
PALB2-203ENST00000565038 HMGN2P05204 90 aaKnown RBP1.1□□□□□ -2.23
PALB2-203ENST00000565038 RBP1P09455 135 aa1.1□□□□□ -2.23
PALB2-203ENST00000565038 CRYGSP22914 178 aa1.1□□□□□ -2.23
PALB2-203ENST00000565038 CDKN2CP42773 168 aa1.1□□□□□ -2.23
PALB2-203ENST00000565038 RAB13P51153 203 aa1.1□□□□□ -2.23
PALB2-203ENST00000565038 DSCR4P56555 118 aaPredicted RBP1.1□□□□□ -2.23
PALB2-203ENST00000565038 TAS2R20P59543 309 aa1.1□□□□□ -2.23
PALB2-203ENST00000565038 NAA20P61599 178 aa1.1□□□□□ -2.23
PALB2-203ENST00000565038 RPL30P62888 115 aaKnown RBP1.1□□□□□ -2.23
PALB2-203ENST00000565038 PLCXD2Q0VAA5 305 aa1.1□□□□□ -2.23
PALB2-203ENST00000565038 ACSM3Q53FZ2 586 aa1.1□□□□□ -2.23
PALB2-203ENST00000565038 NCMAPQ5T1S8 102 aa1.1□□□□□ -2.23
PALB2-203ENST00000565038 C1orf194Q5T5A4 169 aa1.1□□□□□ -2.23
PALB2-203ENST00000565038 LPCAT4Q643R3 524 aa1.1□□□□□ -2.23
PALB2-203ENST00000565038 CD200R1LQ6Q8B3 271 aa1.1□□□□□ -2.23
PALB2-203ENST00000565038 ZNF705AQ6ZN79 300 aaPredicted RBP1.1□□□□□ -2.23
PALB2-203ENST00000565038 LRRC28Q86X40 367 aaPredicted RBP1.1□□□□□ -2.23
PALB2-203ENST00000565038 GPHB5Q86YW7 130 aa1.1□□□□□ -2.23
PALB2-203ENST00000565038 C10orf111Q8N326 155 aa1.1□□□□□ -2.23
PALB2-203ENST00000565038 OR5D16Q8NGK9 328 aa1.1□□□□□ -2.23
PALB2-203ENST00000565038 OR5J2Q8NH18 312 aa1.1□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms