RNA–Protein interactions for RNA: ENST00000564841.1

LINC00554-201, long intergenic non-protein coding RNA 554, humanhuman

BASIC

Gene LINC00554, Length 3,011 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00554-201ENST00000564841 A0A1B0GV72 72 aa12.99□□□□□ -0.33
LINC00554-201ENST00000564841 SERTM2A0A1B0GWG4 89 aa12.99□□□□□ -0.33
LINC00554-201ENST00000564841 CKS1BP61024 79 aa12.99□□□□□ -0.33
LINC00554-201ENST00000564841 CR1LQ2VPA4 569 aa12.99□□□□□ -0.33
LINC00554-201ENST00000564841 C2orf83Q53S99 150 aa12.99□□□□□ -0.33
LINC00554-201ENST00000564841 BCL6BQ8N143 479 aaPredicted RBP12.99□□□□□ -0.33
LINC00554-201ENST00000564841 SRSF12Q8WXF0 261 aaKnown RBP12.99□□□□□ -0.33
LINC00554-201ENST00000564841 DSCAMO60469 2012 aa12.99□□□□□ -0.33
LINC00554-201ENST00000564841 CSN1S1P47710 185 aa12.99□□□□□ -0.33
LINC00554-201ENST00000564841 CRYBA4P53673 196 aa12.99□□□□□ -0.33
LINC00554-201ENST00000564841 C17orf58Q2M2W7 97 aa12.99□□□□□ -0.33
LINC00554-201ENST00000564841 PRNDQ9UKY0 176 aa12.99□□□□□ -0.33
LINC00554-201ENST00000564841 ZNF785A8K8V0 405 aa12.98□□□□□ -0.33
LINC00554-201ENST00000564841 CD300EQ496F6 205 aaPredicted RBP12.98□□□□□ -0.33
LINC00554-201ENST00000564841 EXOC3-AS1Q8N2X6 119 aa12.98□□□□□ -0.33
LINC00554-201ENST00000564841 MED13LQ71F56 2210 aa12.98□□□□□ -0.33
LINC00554-201ENST00000564841 SMIM17P0DL12 118 aa12.98□□□□□ -0.33
LINC00554-201ENST00000564841 IGFL3Q6UXB1 125 aa12.98□□□□□ -0.33
LINC00554-201ENST00000564841 SMIM13P0DJ93 91 aa12.97□□□□□ -0.33
LINC00554-201ENST00000564841 CT45A6P0DMU7 189 aa12.97□□□□□ -0.33
LINC00554-201ENST00000564841 CT45A5P0DMU8 189 aa12.97□□□□□ -0.33
LINC00554-201ENST00000564841 CT45A7P0DMV0 189 aa12.97□□□□□ -0.33
LINC00554-201ENST00000564841 GFRALQ6UXV0 394 aa12.97□□□□□ -0.33
LINC00554-201ENST00000564841 GCSAMQ8N6F7 178 aa12.97□□□□□ -0.33
LINC00554-201ENST00000564841 SPAG8Q99932 426 aaPredicted RBP12.97□□□□□ -0.33
LINC00554-201ENST00000564841 TMSB15BA0A087X1C1 80 aa12.97□□□□□ -0.33
LINC00554-201ENST00000564841 SMKR1H3BMG3 65 aa12.97□□□□□ -0.33
LINC00554-201ENST00000564841 H3BMG7 143 aa12.97□□□□□ -0.33
LINC00554-201ENST00000564841 NHP2Q9NX24 153 aaKnown RBP12.97□□□□□ -0.33
LINC00554-201ENST00000564841 KLF12Q9Y4X4 402 aa12.97□□□□□ -0.33
LINC00554-201ENST00000564841 ANKHD1Q8IWZ3 2542 aaKnown RBP12.97□□□□□ -0.33
LINC00554-201ENST00000564841 MBD3L4A6NDZ8 208 aaPredicted RBP12.97□□□□□ -0.33
LINC00554-201ENST00000564841 MBD3L3A6NE82 208 aaPredicted RBP12.97□□□□□ -0.33
LINC00554-201ENST00000564841 MBD3L5A6NJ08 208 aaPredicted RBP12.97□□□□□ -0.33
LINC00554-201ENST00000564841 TCRAP04437 139 aa12.97□□□□□ -0.33
LINC00554-201ENST00000564841 WT1-ASQ06250 92 aa12.97□□□□□ -0.33
LINC00554-201ENST00000564841 MBD3L2Q8NHZ7 208 aaPredicted RBP12.97□□□□□ -0.33
LINC00554-201ENST00000564841 SIGLEC8Q9NYZ4 499 aa12.97□□□□□ -0.33
LINC00554-201ENST00000564841 D6R8Y8 96 aa12.96□□□□□ -0.33
LINC00554-201ENST00000564841 NDUFS8O00217 210 aa12.96□□□□□ -0.33
LINC00554-201ENST00000564841 PPIFP30405 207 aaKnown RBP12.96□□□□□ -0.33
LINC00554-201ENST00000564841 KIR2DS2P43631 304 aa12.96□□□□□ -0.33
LINC00554-201ENST00000564841 GOLT1AQ6ZVE7 132 aa12.96□□□□□ -0.33
LINC00554-201ENST00000564841 ZNF714Q96N38 554 aa12.96□□□□□ -0.33
LINC00554-201ENST00000564841 VGLL1Q99990 258 aa12.96□□□□□ -0.33
LINC00554-201ENST00000564841 Q9H3A6 140 aa12.96□□□□□ -0.33
LINC00554-201ENST00000564841 C16orf97H3BN30 126 aa12.96□□□□□ -0.34
LINC00554-201ENST00000564841 SCGB2A2Q13296 93 aa12.96□□□□□ -0.34
LINC00554-201ENST00000564841 LCNL1Q6ZST4 164 aa12.96□□□□□ -0.34
LINC00554-201ENST00000564841 CCL13Q99616 98 aa12.96□□□□□ -0.34
LINC00554-201ENST00000564841 SPANXB1Q9NS25 103 aaPredicted RBP12.96□□□□□ -0.34
LINC00554-201ENST00000564841 SLC25A15Q9Y619 301 aa12.96□□□□□ -0.34
LINC00554-201ENST00000564841 AGRNO00468 2067 aa12.95□□□□□ -0.34
LINC00554-201ENST00000564841 HAX1O00165 279 aa12.95□□□□□ -0.34
LINC00554-201ENST00000564841 PRRG2O14669 202 aa12.95□□□□□ -0.34
LINC00554-201ENST00000564841 A0A1B0GUT8 65 aa12.95□□□□□ -0.34
LINC00554-201ENST00000564841 TMEM213A2RRL7 107 aa12.95□□□□□ -0.34
LINC00554-201ENST00000564841 DLL1O00548 723 aa12.95□□□□□ -0.34
LINC00554-201ENST00000564841 HCP5Q6MZN7 132 aa12.95□□□□□ -0.34
LINC00554-201ENST00000564841 FAM216BQ8N7L0 139 aa12.95□□□□□ -0.34
LINC00554-201ENST00000564841 STXBP6Q8NFX7 210 aa12.95□□□□□ -0.34
LINC00554-201ENST00000564841 A0A1W2PRD5 423 aa12.94□□□□□ -0.34
LINC00554-201ENST00000564841 A0A1W2PRF3 423 aa12.94□□□□□ -0.34
LINC00554-201ENST00000564841 A0A1W2PRM7 423 aa12.94□□□□□ -0.34
LINC00554-201ENST00000564841 TCRBV4S1A1TA0A5B7 111 aa12.94□□□□□ -0.34
LINC00554-201ENST00000564841 AMN1Q8IY45 258 aa12.94□□□□□ -0.34
LINC00554-201ENST00000564841 OR5AN1Q8NGI8 311 aa12.94□□□□□ -0.34
LINC00554-201ENST00000564841 OR1L8Q8NGR8 309 aa12.94□□□□□ -0.34
LINC00554-201ENST00000564841 RAXQ9Y2V3 346 aa12.94□□□□□ -0.34
LINC00554-201ENST00000564841 DLX1P56177 255 aa12.94□□□□□ -0.34
LINC00554-201ENST00000564841 OR1L4Q8NGR5 311 aa12.94□□□□□ -0.34
LINC00554-201ENST00000564841 ZNF414Q96IQ9 312 aa12.94□□□□□ -0.34
LINC00554-201ENST00000564841 DCHS2Q6V1P9 2916 aa12.93□□□□□ -0.34
LINC00554-201ENST00000564841 Q8NA96 180 aa12.93□□□□□ -0.34
LINC00554-201ENST00000564841 OR9G4Q8NGQ1 327 aa12.93□□□□□ -0.34
LINC00554-201ENST00000564841 SOX21Q9Y651 276 aaPredicted RBP12.93□□□□□ -0.34
LINC00554-201ENST00000564841 OR4X2Q8NGF9 303 aa12.93□□□□□ -0.34
LINC00554-201ENST00000564841 FAM57AQ8TBR7 257 aa12.93□□□□□ -0.34
LINC00554-201ENST00000564841 RALYQ9UKM9 306 aaKnown RBP12.93□□□□□ -0.34
LINC00554-201ENST00000564841 A0A0G2JNJ9 132 aa12.92□□□□□ -0.34
LINC00554-201ENST00000564841 TMEM189A5PLL7 270 aa12.92□□□□□ -0.34
LINC00554-201ENST00000564841 CGB1A6NKQ9 187 aa12.92□□□□□ -0.34
LINC00554-201ENST00000564841 DIAPH2-AS1Q14236 149 aa12.92□□□□□ -0.34
LINC00554-201ENST00000564841 Q9UFV3 132 aa12.92□□□□□ -0.34
LINC00554-201ENST00000564841 NPIPB6E9PJ23 425 aa12.92□□□□□ -0.34
LINC00554-201ENST00000564841 K7EQM0 130 aa12.92□□□□□ -0.34
LINC00554-201ENST00000564841 GATA3P23771 443 aa12.92□□□□□ -0.34
LINC00554-201ENST00000564841 ERHP84090 104 aaKnown RBP12.92□□□□□ -0.34
LINC00554-201ENST00000564841 CT83Q5H943 113 aa12.92□□□□□ -0.34
LINC00554-201ENST00000564841 Q86TA4 180 aa12.92□□□□□ -0.34
LINC00554-201ENST00000564841 HARBI1Q96MB7 349 aa12.92□□□□□ -0.34
LINC00554-201ENST00000564841 C17orf77Q96MU5 243 aa12.92□□□□□ -0.34
LINC00554-201ENST00000564841 C20orf78Q9BR46 151 aa12.92□□□□□ -0.34
LINC00554-201ENST00000564841 NDUFA4L2Q9NRX3 87 aa12.92□□□□□ -0.34
LINC00554-201ENST00000564841 C1orf162Q8NEQ5 155 aaPredicted RBP12.91□□□□□ -0.34
LINC00554-201ENST00000564841 FMC1Q96HJ9 113 aa12.91□□□□□ -0.34
LINC00554-201ENST00000564841 ZNF492Q9P255 531 aa12.91□□□□□ -0.34
LINC00554-201ENST00000564841 IGLV2-11P01706 119 aa12.91□□□□□ -0.34
LINC00554-201ENST00000564841 CCL8P80075 99 aa12.91□□□□□ -0.34
LINC00554-201ENST00000564841 LGALS9BQ3B8N2 356 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms