RNA–Protein interactions for RNA: ENST00000564353.5

CLK3-215, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 2,847 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-215ENST00000564353 RBPJQ06330 500 aa10.66□□□□□ -0.7
CLK3-215ENST00000564353 FAM71F2Q6NXP2 309 aa10.66□□□□□ -0.7
CLK3-215ENST00000564353 URB1-AS1Q96HZ7 61 aa10.66□□□□□ -0.7
CLK3-215ENST00000564353 K7ENP7 123 aa10.66□□□□□ -0.7
CLK3-215ENST00000564353 TCTAP57738 103 aa10.66□□□□□ -0.7
CLK3-215ENST00000564353 FAM231DQ6ZW35 169 aa10.66□□□□□ -0.7
CLK3-215ENST00000564353 ZNF738Q8NE65 137 aa10.66□□□□□ -0.7
CLK3-215ENST00000564353 MLST8Q9BVC4 326 aa10.66□□□□□ -0.7
CLK3-215ENST00000564353 MEGF9Q9H1U4 602 aa10.66□□□□□ -0.7
CLK3-215ENST00000564353 HBBP68871 147 aa10.66□□□□□ -0.7
CLK3-215ENST00000564353 VAMP3Q15836 100 aa10.66□□□□□ -0.7
CLK3-215ENST00000564353 K7EIM0 57 aa10.65□□□□□ -0.7
CLK3-215ENST00000564353 LTAP01374 205 aa10.65□□□□□ -0.7
CLK3-215ENST00000564353 HINT1P49773 126 aaPredicted RBP10.65□□□□□ -0.7
CLK3-215ENST00000564353 DYNAPQ8N1N2 210 aa10.65□□□□□ -0.7
CLK3-215ENST00000564353 STXBP6Q8NFX7 210 aa10.65□□□□□ -0.7
CLK3-215ENST00000564353 OR8B3Q8NGG8 313 aa10.65□□□□□ -0.7
CLK3-215ENST00000564353 SMIM12Q96EX1 92 aa10.65□□□□□ -0.7
CLK3-215ENST00000564353 TOMM40O96008 361 aa10.65□□□□□ -0.71
CLK3-215ENST00000564353 PRSS57Q6UWY2 283 aa10.65□□□□□ -0.71
CLK3-215ENST00000564353 Q86TA4 180 aa10.65□□□□□ -0.71
CLK3-215ENST00000564353 C8orf31Q8N9H6 132 aa10.65□□□□□ -0.71
CLK3-215ENST00000564353 ZC2HC1AQ96GY0 325 aa10.65□□□□□ -0.71
CLK3-215ENST00000564353 RAXQ9Y2V3 346 aa10.65□□□□□ -0.71
CLK3-215ENST00000564353 IGHV2-70DA0A0C4DH43 119 aa10.64□□□□□ -0.71
CLK3-215ENST00000564353 CHEK1O14757 476 aa10.64□□□□□ -0.71
CLK3-215ENST00000564353 FXYD7P58549 80 aa10.64□□□□□ -0.71
CLK3-215ENST00000564353 OR4B1Q8NGF8 309 aa10.64□□□□□ -0.71
CLK3-215ENST00000564353 C8orf49Q96NF6 230 aa10.64□□□□□ -0.71
CLK3-215ENST00000564353 VKORC1Q9BQB6 163 aa10.64□□□□□ -0.71
CLK3-215ENST00000564353 COX11Q9Y6N1 276 aa10.64□□□□□ -0.71
CLK3-215ENST00000564353 HTR1DP28221 377 aa10.64□□□□□ -0.71
CLK3-215ENST00000564353 C1orf122Q6ZSJ8 110 aa10.64□□□□□ -0.71
CLK3-215ENST00000564353 IGHV3OR16-13A0A075B7E8 117 aa10.63□□□□□ -0.71
CLK3-215ENST00000564353 IGHV3-74A0A0B4J1X5 117 aa10.63□□□□□ -0.71
CLK3-215ENST00000564353 ZNF785A8K8V0 405 aa10.63□□□□□ -0.71
CLK3-215ENST00000564353 A8MWL6 223 aa10.63□□□□□ -0.71
CLK3-215ENST00000564353 IGLV2-11P01706 119 aa10.63□□□□□ -0.71
CLK3-215ENST00000564353 ARMS2P0C7Q2 107 aa10.63□□□□□ -0.71
CLK3-215ENST00000564353 CTRLP40313 264 aa10.63□□□□□ -0.71
CLK3-215ENST00000564353 NDPQ00604 133 aa10.63□□□□□ -0.71
CLK3-215ENST00000564353 FMC1Q96HJ9 113 aa10.63□□□□□ -0.71
CLK3-215ENST00000564353 KLF12Q9Y4X4 402 aa10.63□□□□□ -0.71
CLK3-215ENST00000564353 A0A1B0GXF2 115 aa10.63□□□□□ -0.71
CLK3-215ENST00000564353 OR2T8A6NH00 312 aa10.63□□□□□ -0.71
CLK3-215ENST00000564353 LIPFP07098 398 aa10.63□□□□□ -0.71
CLK3-215ENST00000564353 IGLC2P0DOY2 106 aa10.63□□□□□ -0.71
CLK3-215ENST00000564353 IGLC3P0DOY3 106 aa10.63□□□□□ -0.71
CLK3-215ENST00000564353 HNRNPA3P51991 378 aaKnown RBP10.63□□□□□ -0.71
CLK3-215ENST00000564353 SCGB2A2Q13296 93 aa10.63□□□□□ -0.71
CLK3-215ENST00000564353 hDV102S1A0JD36 115 aa10.62□□□□□ -0.71
CLK3-215ENST00000564353 C19orf71A6NCJ1 209 aa10.62□□□□□ -0.71
CLK3-215ENST00000564353 GNG7O60262 68 aa10.62□□□□□ -0.71
CLK3-215ENST00000564353 CSMD2Q7Z408 3487 aa10.62□□□□□ -0.71
CLK3-215ENST00000564353 IGHV3-66A0A0C4DH42 116 aa10.62□□□□□ -0.71
CLK3-215ENST00000564353 NBR2O15453 112 aa10.62□□□□□ -0.71
CLK3-215ENST00000564353 OR2J3O76001 311 aa10.62□□□□□ -0.71
CLK3-215ENST00000564353 HLA-DMBP28068 263 aa10.62□□□□□ -0.71
CLK3-215ENST00000564353 COX19Q49B96 90 aa10.62□□□□□ -0.71
CLK3-215ENST00000564353 WIPF2Q8TF74 440 aaPredicted RBP10.62□□□□□ -0.71
CLK3-215ENST00000564353 RNF125Q96EQ8 232 aa10.62□□□□□ -0.71
CLK3-215ENST00000564353 CA7P43166 264 aa10.62□□□□□ -0.71
CLK3-215ENST00000564353 ZNF491Q8N8L2 437 aa10.62□□□□□ -0.71
CLK3-215ENST00000564353 Q8TAT8 98 aa10.62□□□□□ -0.71
CLK3-215ENST00000564353 PRSS22Q9GZN4 317 aa10.62□□□□□ -0.71
CLK3-215ENST00000564353 IGKV2-40A0A087WW87 121 aaPredicted RBP10.61□□□□□ -0.71
CLK3-215ENST00000564353 LY6LH3BQJ8 138 aa10.61□□□□□ -0.71
CLK3-215ENST00000564353 SAP30O75446 220 aa10.61□□□□□ -0.71
CLK3-215ENST00000564353 IGKV2D-40P01614 121 aaPredicted RBP10.61□□□□□ -0.71
CLK3-215ENST00000564353 HLA-DRB1P01911 266 aa10.61□□□□□ -0.71
CLK3-215ENST00000564353 IGLL1P15814 213 aa10.61□□□□□ -0.71
CLK3-215ENST00000564353 DPM3Q9P2X0 92 aa10.61□□□□□ -0.71
CLK3-215ENST00000564353 LAMTOR2Q9Y2Q5 125 aa10.61□□□□□ -0.71
CLK3-215ENST00000564353 ITPR1Q14643 2758 aa10.61□□□□□ -0.71
CLK3-215ENST00000564353 TRBV19A0A075B6N1 114 aa10.61□□□□□ -0.71
CLK3-215ENST00000564353 IGHV1-24A0A0C4DH33 117 aa10.61□□□□□ -0.71
CLK3-215ENST00000564353 LOC389332A0A1B0GUA5 103 aa10.61□□□□□ -0.71
CLK3-215ENST00000564353 C2orf70A6NJV1 201 aa10.61□□□□□ -0.71
CLK3-215ENST00000564353 K7ERU9 68 aa10.61□□□□□ -0.71
CLK3-215ENST00000564353 CRIP1P50238 77 aa10.61□□□□□ -0.71
CLK3-215ENST00000564353 RBPMS2Q6ZRY4 209 aaKnown RBP10.61□□□□□ -0.71
CLK3-215ENST00000564353 BPIFA4PQ86YQ2 179 aa10.61□□□□□ -0.71
CLK3-215ENST00000564353 OR4F17Q8NGA8 305 aa10.61□□□□□ -0.71
CLK3-215ENST00000564353 OTORQ9NRC9 128 aa10.61□□□□□ -0.71
CLK3-215ENST00000564353 MRPL27Q9P0M9 148 aaKnown RBP10.61□□□□□ -0.71
CLK3-215ENST00000564353 IGHV3-49A0A0A0MS15 119 aa10.6□□□□□ -0.71
CLK3-215ENST00000564353 ADORA2A-AS1P86434 159 aa10.6□□□□□ -0.71
CLK3-215ENST00000564353 MSRB2Q9Y3D2 182 aa10.6□□□□□ -0.71
CLK3-215ENST00000564353 SNAI2O43623 268 aa10.59□□□□□ -0.71
CLK3-215ENST00000564353 FAM106CPP0CH98 169 aa10.59□□□□□ -0.71
CLK3-215ENST00000564353 FAM106AQ4KMX7 169 aa10.59□□□□□ -0.71
CLK3-215ENST00000564353 SIGLEC15Q6ZMC9 328 aa10.59□□□□□ -0.71
CLK3-215ENST00000564353 CHRDL1Q9BU40 450 aa10.59□□□□□ -0.71
CLK3-215ENST00000564353 TMUB1Q9BVT8 246 aa10.59□□□□□ -0.71
CLK3-215ENST00000564353 UQCR10Q9UDW1 63 aa10.59□□□□□ -0.71
CLK3-215ENST00000564353 PSG8Q9UQ74 426 aa10.59□□□□□ -0.71
CLK3-215ENST00000564353 A0A1W2PPR1 153 aa10.59□□□□□ -0.71
CLK3-215ENST00000564353 ZFP36P26651 326 aaKnown RBP10.59□□□□□ -0.71
CLK3-215ENST00000564353 PVRIGQ6DKI7 326 aa10.59□□□□□ -0.71
CLK3-215ENST00000564353 CFHR4Q92496 578 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms