RNA–Protein interactions for RNA: ENST00000563683.5

RNF40-204, Transcript of ring finger protein 40, humanhuman

TSL 5 BASIC

Gene RNF40, Length 4,063 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-204ENST00000563683 FNDC4Q9H6D8 234 aaPredicted RBP8.39□□□□□ -1.07
RNF40-204ENST00000563683 SOX21Q9Y651 276 aaPredicted RBP8.39□□□□□ -1.07
RNF40-204ENST00000563683 SEC11AP67812 179 aa8.39□□□□□ -1.07
RNF40-204ENST00000563683 RBPMS2Q6ZRY4 209 aaKnown RBP8.39□□□□□ -1.07
RNF40-204ENST00000563683 IGFBPL1Q8WX77 278 aa8.39□□□□□ -1.07
RNF40-204ENST00000563683 FAM168AQ92567 244 aa8.39□□□□□ -1.07
RNF40-204ENST00000563683 SLC25A39Q9BZJ4 359 aaPredicted RBP8.39□□□□□ -1.07
RNF40-204ENST00000563683 CTSZQ9UBR2 303 aa8.39□□□□□ -1.07
RNF40-204ENST00000563683 USP34Q70CQ2 3546 aa8.38□□□□□ -1.07
RNF40-204ENST00000563683 hDV102S1A0JD36 115 aa8.38□□□□□ -1.07
RNF40-204ENST00000563683 PF4V1P10720 104 aa8.38□□□□□ -1.07
RNF40-204ENST00000563683 TNFRSF14Q92956 283 aa8.38□□□□□ -1.07
RNF40-204ENST00000563683 AP5S1Q9NUS5 200 aa8.38□□□□□ -1.07
RNF40-204ENST00000563683 LINC00527Q9UJ94 153 aa8.38□□□□□ -1.07
RNF40-204ENST00000563683 F11RQ9Y624 299 aaKnown RBP8.38□□□□□ -1.07
RNF40-204ENST00000563683 M0R3E3 92 aa8.38□□□□□ -1.07
RNF40-204ENST00000563683 SPANXN1Q5VSR9 72 aa8.38□□□□□ -1.07
RNF40-204ENST00000563683 GRNP28799 593 aaKnown RBP8.38□□□□□ -1.07
RNF40-204ENST00000563683 TMEM78Q5T7P6 136 aa8.38□□□□□ -1.07
RNF40-204ENST00000563683 NEU4Q8WWR8 484 aaPredicted RBP8.38□□□□□ -1.07
RNF40-204ENST00000563683 ZNF503Q96F45 646 aa8.38□□□□□ -1.07
RNF40-204ENST00000563683 C16orf92Q96LL3 132 aa8.38□□□□□ -1.07
RNF40-204ENST00000563683 SCRT2Q9NQ03 307 aa8.38□□□□□ -1.07
RNF40-204ENST00000563683 DYSFO75923 2080 aa8.37□□□□□ -1.07
RNF40-204ENST00000563683 SNAI2O43623 268 aa8.37□□□□□ -1.07
RNF40-204ENST00000563683 TCRAP04437 139 aa8.37□□□□□ -1.07
RNF40-204ENST00000563683 BMI1P35226 326 aa8.37□□□□□ -1.07
RNF40-204ENST00000563683 CLEC2AQ6UVW9 174 aa8.37□□□□□ -1.07
RNF40-204ENST00000563683 DDB2Q92466 427 aa8.37□□□□□ -1.07
RNF40-204ENST00000563683 OTORQ9NRC9 128 aa8.37□□□□□ -1.07
RNF40-204ENST00000563683 F5H697 171 aa8.37□□□□□ -1.07
RNF40-204ENST00000563683 CEACAM4O75871 244 aa8.37□□□□□ -1.07
RNF40-204ENST00000563683 GDF5OSQ5U4N7 250 aa8.37□□□□□ -1.07
RNF40-204ENST00000563683 C1orf229Q6ZS94 237 aaPredicted RBP8.37□□□□□ -1.07
RNF40-204ENST00000563683 PSG8Q9UQ74 426 aa8.37□□□□□ -1.07
RNF40-204ENST00000563683 PTPN13Q12923 2485 aa8.37□□□□□ -1.07
RNF40-204ENST00000563683 C7orf71A4D174 169 aa8.37□□□□□ -1.07
RNF40-204ENST00000563683 THBDP07204 575 aa8.37□□□□□ -1.07
RNF40-204ENST00000563683 CLEC19AQ6UXS0 136 aa8.37□□□□□ -1.07
RNF40-204ENST00000563683 PRSS33Q8NF86 280 aa8.37□□□□□ -1.07
RNF40-204ENST00000563683 METTL26Q96S19 204 aa8.37□□□□□ -1.07
RNF40-204ENST00000563683 TRGV9Q99603 122 aa8.37□□□□□ -1.07
RNF40-204ENST00000563683 LOC102724200A0A096LPH7 203 aaPredicted RBP8.36□□□□□ -1.07
RNF40-204ENST00000563683 IGHV1-24A0A0C4DH33 117 aa8.36□□□□□ -1.07
RNF40-204ENST00000563683 APOHP02749 345 aaPredicted RBP8.36□□□□□ -1.07
RNF40-204ENST00000563683 IGLC1P0CG04 106 aa8.36□□□□□ -1.07
RNF40-204ENST00000563683 POU2AF1Q16633 256 aa8.36□□□□□ -1.07
RNF40-204ENST00000563683 C3orf36Q3SXR2 165 aa8.36□□□□□ -1.07
RNF40-204ENST00000563683 SPATA12Q7Z6I5 190 aa8.36□□□□□ -1.07
RNF40-204ENST00000563683 ZNF329Q86UD4 541 aa8.36□□□□□ -1.07
RNF40-204ENST00000563683 IGKV1OR2-108A0A075B7D4 117 aa8.36□□□□□ -1.07
RNF40-204ENST00000563683 A6NDN8 102 aa8.36□□□□□ -1.07
RNF40-204ENST00000563683 SMIM17P0DL12 118 aa8.36□□□□□ -1.07
RNF40-204ENST00000563683 NMUP48645 174 aa8.36□□□□□ -1.07
RNF40-204ENST00000563683 ATP5J2P56134 94 aa8.36□□□□□ -1.07
RNF40-204ENST00000563683 GUSBP1Q15486 140 aa8.36□□□□□ -1.07
RNF40-204ENST00000563683 MORN5Q5VZ52 161 aa8.36□□□□□ -1.07
RNF40-204ENST00000563683 IGFL4Q6B9Z1 124 aa8.36□□□□□ -1.07
RNF40-204ENST00000563683 REV3LO60673 3130 aa8.36□□□□□ -1.07
RNF40-204ENST00000563683 SH2D7A6NKC9 451 aaPredicted RBP8.36□□□□□ -1.07
RNF40-204ENST00000563683 E7EUB6 86 aa8.36□□□□□ -1.07
RNF40-204ENST00000563683 K7ENP7 123 aa8.36□□□□□ -1.07
RNF40-204ENST00000563683 ZNF138P52744 262 aa8.36□□□□□ -1.07
RNF40-204ENST00000563683 DLX6P56179 175 aa8.36□□□□□ -1.07
RNF40-204ENST00000563683 TCF15Q12870 199 aa8.36□□□□□ -1.07
RNF40-204ENST00000563683 SLC25A2Q9BXI2 301 aa8.36□□□□□ -1.07
RNF40-204ENST00000563683 TRAV8-6A0A0B4J262 113 aa8.35□□□□□ -1.07
RNF40-204ENST00000563683 A0A1B0GXF2 115 aa8.35□□□□□ -1.07
RNF40-204ENST00000563683 HTN1P15515 57 aa8.35□□□□□ -1.07
RNF40-204ENST00000563683 PAX2Q02962 417 aa8.35□□□□□ -1.07
RNF40-204ENST00000563683 FER1L6-AS1Q8NA97 138 aa8.35□□□□□ -1.07
RNF40-204ENST00000563683 RITA1Q96K30 269 aa8.35□□□□□ -1.07
RNF40-204ENST00000563683 NPIPB5A8MRT5 1133 aa8.35□□□□□ -1.07
RNF40-204ENST00000563683 PPIFP30405 207 aaKnown RBP8.35□□□□□ -1.07
RNF40-204ENST00000563683 FAM120AOSQ5T036 256 aa8.35□□□□□ -1.07
RNF40-204ENST00000563683 C18orf15Q96N68 181 aa8.35□□□□□ -1.07
RNF40-204ENST00000563683 A0A087X0K7 114 aa8.35□□□□□ -1.07
RNF40-204ENST00000563683 TMEM116Q8NCL8 245 aa8.35□□□□□ -1.07
RNF40-204ENST00000563683 OR10AG1Q8NH19 301 aa8.35□□□□□ -1.07
RNF40-204ENST00000563683 SELENOKQ9Y6D0 94 aa8.34□□□□□ -1.07
RNF40-204ENST00000563683 COX8AP10176 69 aa8.34□□□□□ -1.07
RNF40-204ENST00000563683 RIPPLY3P57055 190 aa8.34□□□□□ -1.07
RNF40-204ENST00000563683 TMEM97Q5BJF2 176 aa8.34□□□□□ -1.07
RNF40-204ENST00000563683 ARHGAP32A7KAX9 2087 aa8.34□□□□□ -1.07
RNF40-204ENST00000563683 MGPP08493 103 aa8.34□□□□□ -1.07
RNF40-204ENST00000563683 UQCRFS1P47985 274 aa8.34□□□□□ -1.07
RNF40-204ENST00000563683 C5orf64Q2M2E5 130 aa8.34□□□□□ -1.07
RNF40-204ENST00000563683 CT83Q5H943 113 aa8.34□□□□□ -1.07
RNF40-204ENST00000563683 PVRIGQ6DKI7 326 aa8.34□□□□□ -1.07
RNF40-204ENST00000563683 ZNF841Q6ZN19 808 aa8.34□□□□□ -1.07
RNF40-204ENST00000563683 VMO1Q7Z5L0 202 aa8.34□□□□□ -1.07
RNF40-204ENST00000563683 URB1-AS1Q96HZ7 61 aa8.34□□□□□ -1.07
RNF40-204ENST00000563683 MCRIP2Q9BUT9 160 aaKnown RBP8.34□□□□□ -1.07
RNF40-204ENST00000563683 MYO15AQ9UKN7 3530 aa8.34□□□□□ -1.07
RNF40-204ENST00000563683 IGHV3-11P01762 117 aa8.34□□□□□ -1.08
RNF40-204ENST00000563683 IGKV2-40A0A087WW87 121 aaPredicted RBP8.33□□□□□ -1.08
RNF40-204ENST00000563683 IGKV2D-40P01614 121 aaPredicted RBP8.33□□□□□ -1.08
RNF40-204ENST00000563683 TRGV3P03979 118 aa8.33□□□□□ -1.08
RNF40-204ENST00000563683 TMEM219Q86XT9 240 aa8.33□□□□□ -1.08
RNF40-204ENST00000563683 PRELID3AQ96N28 172 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms