RNA–Protein interactions for RNA: ENST00000563590.2

CCDC187-201, Transcript of coiled-coil domain containing 187, humanhuman

TSL 1 (best)

Gene CCDC187, Length 3,543 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187-201ENST00000563590 ATP5L2Q7Z4Y8 100 aa10.25□□□□□ -0.77
CCDC187-201ENST00000563590 PRR7Q8TB68 274 aa10.25□□□□□ -0.77
CCDC187-201ENST00000563590 MBD6Q96DN6 1003 aa10.25□□□□□ -0.77
CCDC187-201ENST00000563590 A0A1W2PPM0 123 aa10.25□□□□□ -0.77
CCDC187-201ENST00000563590 H3BRM9 83 aa10.25□□□□□ -0.77
CCDC187-201ENST00000563590 CKS2P33552 79 aa10.25□□□□□ -0.77
CCDC187-201ENST00000563590 FOXA2Q9Y261 457 aaPredicted RBP10.25□□□□□ -0.77
CCDC187-201ENST00000563590 IGKV1D-17A0A075B6S4 117 aa10.25□□□□□ -0.77
CCDC187-201ENST00000563590 RAB9AP51151 201 aa10.25□□□□□ -0.77
CCDC187-201ENST00000563590 LOXL1Q08397 574 aaPredicted RBP10.25□□□□□ -0.77
CCDC187-201ENST00000563590 NPFFR1Q9GZQ6 430 aa10.25□□□□□ -0.77
CCDC187-201ENST00000563590 TMEM14BQ9NUH8 114 aa10.25□□□□□ -0.77
CCDC187-201ENST00000563590 TGFAP01135 160 aa10.24□□□□□ -0.77
CCDC187-201ENST00000563590 Q6ZT83 130 aa10.24□□□□□ -0.77
CCDC187-201ENST00000563590 FAM90A1Q86YD7 464 aa10.24□□□□□ -0.77
CCDC187-201ENST00000563590 PRELID3AQ96N28 172 aa10.24□□□□□ -0.77
CCDC187-201ENST00000563590 C19orf24Q9BVV8 132 aa10.24□□□□□ -0.77
CCDC187-201ENST00000563590 CHTOPQ9Y3Y2 248 aaKnown RBP10.24□□□□□ -0.77
CCDC187-201ENST00000563590 RNASE2P10153 161 aaKnown RBP10.24□□□□□ -0.77
CCDC187-201ENST00000563590 BMI1P35226 326 aa10.24□□□□□ -0.77
CCDC187-201ENST00000563590 GFRALQ6UXV0 394 aa10.24□□□□□ -0.77
CCDC187-201ENST00000563590 MRPL20Q9BYC9 149 aaKnown RBP10.24□□□□□ -0.77
CCDC187-201ENST00000563590 A0A1B0GWB2 263 aa10.24□□□□□ -0.77
CCDC187-201ENST00000563590 SMAD7O15105 426 aaKnown RBP10.24□□□□□ -0.77
CCDC187-201ENST00000563590 C2orf91Q6ZV80 131 aa10.24□□□□□ -0.77
CCDC187-201ENST00000563590 GTSCR1Q86UQ5 136 aa10.24□□□□□ -0.77
CCDC187-201ENST00000563590 AMN1Q8IY45 258 aa10.24□□□□□ -0.77
CCDC187-201ENST00000563590 WIPF2Q8TF74 440 aaPredicted RBP10.24□□□□□ -0.77
CCDC187-201ENST00000563590 ARPC1AQ92747 370 aa10.24□□□□□ -0.77
CCDC187-201ENST00000563590 FAM167A-AS1Q96KT0 104 aa10.24□□□□□ -0.77
CCDC187-201ENST00000563590 TMEM160Q9NX00 188 aa10.24□□□□□ -0.77
CCDC187-201ENST00000563590 CEACAM3P40198 252 aa10.23□□□□□ -0.77
CCDC187-201ENST00000563590 TWIST1Q15672 202 aa10.23□□□□□ -0.77
CCDC187-201ENST00000563590 FAM120AOSQ5T036 256 aa10.23□□□□□ -0.77
CCDC187-201ENST00000563590 ZNF747Q9BV97 191 aa10.23□□□□□ -0.77
CCDC187-201ENST00000563590 H3BMG7 143 aa10.23□□□□□ -0.77
CCDC187-201ENST00000563590 NDUFS8O00217 210 aa10.23□□□□□ -0.77
CCDC187-201ENST00000563590 LOXL3P58215 753 aa10.23□□□□□ -0.77
CCDC187-201ENST00000563590 WFDC2Q14508 124 aa10.23□□□□□ -0.77
CCDC187-201ENST00000563590 OR5A1Q8NGJ0 315 aa10.23□□□□□ -0.77
CCDC187-201ENST00000563590 CNIH1O95406 144 aa10.23□□□□□ -0.77
CCDC187-201ENST00000563590 RPS20P60866 119 aaKnown RBP10.23□□□□□ -0.77
CCDC187-201ENST00000563590 MBNL2Q5VZF2 373 aaKnown RBP10.23□□□□□ -0.77
CCDC187-201ENST00000563590 DDB2Q92466 427 aa10.23□□□□□ -0.77
CCDC187-201ENST00000563590 DKK2Q9UBU2 259 aa10.23□□□□□ -0.77
CCDC187-201ENST00000563590 IGHV1-18A0A0C4DH31 117 aa10.22□□□□□ -0.77
CCDC187-201ENST00000563590 TMEM213A2RRL7 107 aa10.22□□□□□ -0.77
CCDC187-201ENST00000563590 ARL3P36405 182 aa10.22□□□□□ -0.77
CCDC187-201ENST00000563590 GAGE12HA6NDE8 117 aa10.22□□□□□ -0.77
CCDC187-201ENST00000563590 TCRAP04437 139 aa10.22□□□□□ -0.77
CCDC187-201ENST00000563590 NBL1P41271 181 aa10.22□□□□□ -0.77
CCDC187-201ENST00000563590 C16orf54Q6UWD8 224 aa10.22□□□□□ -0.77
CCDC187-201ENST00000563590 FAM231DQ6ZW35 169 aa10.22□□□□□ -0.77
CCDC187-201ENST00000563590 Q71RC1 249 aaPredicted RBP10.22□□□□□ -0.77
CCDC187-201ENST00000563590 IFI27L1Q96BM0 104 aa10.22□□□□□ -0.77
CCDC187-201ENST00000563590 FXYD5Q96DB9 178 aa10.22□□□□□ -0.77
CCDC187-201ENST00000563590 ABHD17AQ96GS6 310 aa10.22□□□□□ -0.77
CCDC187-201ENST00000563590 RAB9BQ9NP90 201 aa10.22□□□□□ -0.77
CCDC187-201ENST00000563590 LOC107984156A0A0G2JMH3 177 aa10.21□□□□□ -0.77
CCDC187-201ENST00000563590 KBTBD11-OT1A0A1B0GTJ5 212 aa10.21□□□□□ -0.77
CCDC187-201ENST00000563590 PRRG2O14669 202 aa10.21□□□□□ -0.77
CCDC187-201ENST00000563590 EVI2AP22794 236 aa10.21□□□□□ -0.77
CCDC187-201ENST00000563590 ATP5G2Q06055 141 aa10.21□□□□□ -0.77
CCDC187-201ENST00000563590 PATE2Q6UY27 113 aa10.21□□□□□ -0.77
CCDC187-201ENST00000563590 ARL17AQ8IVW1 177 aa10.21□□□□□ -0.77
CCDC187-201ENST00000563590 MRPL36Q9P0J6 103 aaKnown RBP10.21□□□□□ -0.77
CCDC187-201ENST00000563590 TCRBV4S1A1TA0A5B7 111 aa10.21□□□□□ -0.77
CCDC187-201ENST00000563590 E7EUB6 86 aa10.21□□□□□ -0.77
CCDC187-201ENST00000563590 LGALS7P47929 136 aa10.21□□□□□ -0.77
CCDC187-201ENST00000563590 NEU4Q8WWR8 484 aaPredicted RBP10.21□□□□□ -0.77
CCDC187-201ENST00000563590 HIST1H4GQ99525 98 aa10.21□□□□□ -0.77
CCDC187-201ENST00000563590 KLK15Q9H2R5 256 aa10.21□□□□□ -0.77
CCDC187-201ENST00000563590 LRBAP50851 2863 aa10.21□□□□□ -0.78
CCDC187-201ENST00000563590 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.21□□□□□ -0.78
CCDC187-201ENST00000563590 STXBP6Q8NFX7 210 aa10.21□□□□□ -0.78
CCDC187-201ENST00000563590 ZNF418Q8TF45 676 aaPredicted RBP10.21□□□□□ -0.78
CCDC187-201ENST00000563590 TNFRSF1AP19438 455 aa10.2□□□□□ -0.78
CCDC187-201ENST00000563590 FXYD2P54710 66 aa10.2□□□□□ -0.78
CCDC187-201ENST00000563590 MZT1Q08AG7 82 aa10.2□□□□□ -0.78
CCDC187-201ENST00000563590 LINC01560Q8TB33 94 aa10.2□□□□□ -0.78
CCDC187-201ENST00000563590 H3BVH4 76 aa10.2□□□□□ -0.78
CCDC187-201ENST00000563590 M0R3E3 92 aa10.2□□□□□ -0.78
CCDC187-201ENST00000563590 F2RL2O00254 374 aa10.2□□□□□ -0.78
CCDC187-201ENST00000563590 TM4SF5O14894 197 aa10.2□□□□□ -0.78
CCDC187-201ENST00000563590 PRR30Q53SZ7 412 aaPredicted RBP10.2□□□□□ -0.78
CCDC187-201ENST00000563590 LINC01545Q5VT33 79 aa10.2□□□□□ -0.78
CCDC187-201ENST00000563590 GCSAMQ8N6F7 178 aa10.2□□□□□ -0.78
CCDC187-201ENST00000563590 MDS2Q8NDY4 140 aa10.2□□□□□ -0.78
CCDC187-201ENST00000563590 ATP6V0BQ99437 205 aa10.2□□□□□ -0.78
CCDC187-201ENST00000563590 FOXC2Q99958 501 aa10.2□□□□□ -0.78
CCDC187-201ENST00000563590 ASH1LQ9NR48 2969 aaKnown RBP10.2□□□□□ -0.78
CCDC187-201ENST00000563590 TRAV26-1A0A087WT03 109 aa10.2□□□□□ -0.78
CCDC187-201ENST00000563590 ORM1P02763 201 aa10.2□□□□□ -0.78
CCDC187-201ENST00000563590 C2orf83Q53S99 150 aa10.2□□□□□ -0.78
CCDC187-201ENST00000563590 OR5AN1Q8NGI8 311 aa10.2□□□□□ -0.78
CCDC187-201ENST00000563590 SRSF8Q9BRL6 282 aaKnown RBP10.2□□□□□ -0.78
CCDC187-201ENST00000563590 RPUSD1Q9UJJ7 312 aaKnown RBP10.2□□□□□ -0.78
CCDC187-201ENST00000563590 HIGD1AQ9Y241 93 aa10.2□□□□□ -0.78
CCDC187-201ENST00000563590 SMG1Q96Q15 3661 aaKnown RBP10.19□□□□□ -0.78
CCDC187-201ENST00000563590 MSMPQ1L6U9 139 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms