RNA–Protein interactions for RNA: ENST00000562118.1

CDH1-204, Transcript of cadherin 1, humanhuman

TSL 2

Gene CDH1, Length 952 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-204ENST00000562118 SPATA31B1PQ5VZV4 182 aa9.86□□□□□ -0.83
CDH1-204ENST00000562118 FOXI2Q6ZQN5 318 aa9.86□□□□□ -0.83
CDH1-204ENST00000562118 ZNF503Q96F45 646 aa9.86□□□□□ -0.83
CDH1-204ENST00000562118 SLC50A1Q9BRV3 221 aa9.86□□□□□ -0.83
CDH1-204ENST00000562118 SAV1Q9H4B6 383 aaPredicted RBP9.86□□□□□ -0.83
CDH1-204ENST00000562118 TP53TG1Q9Y2A0 90 aa9.86□□□□□ -0.83
CDH1-204ENST00000562118 CSMD3Q7Z407 3707 aa9.86□□□□□ -0.83
CDH1-204ENST00000562118 TRBV19A0A075B6N1 114 aa9.85□□□□□ -0.83
CDH1-204ENST00000562118 JTBO76095 146 aa9.85□□□□□ -0.83
CDH1-204ENST00000562118 C1QBP02746 253 aa9.85□□□□□ -0.83
CDH1-204ENST00000562118 APOC4P55056 127 aa9.85□□□□□ -0.83
CDH1-204ENST00000562118 Q6ZWC4 215 aa9.85□□□□□ -0.83
CDH1-204ENST00000562118 MIR17HGQ75NE6 70 aa9.85□□□□□ -0.83
CDH1-204ENST00000562118 GNPNAT1Q96EK6 184 aaPredicted RBP9.85□□□□□ -0.83
CDH1-204ENST00000562118 ASCL2Q99929 193 aa9.85□□□□□ -0.83
CDH1-204ENST00000562118 SPATA25Q9BR10 227 aa9.85□□□□□ -0.83
CDH1-204ENST00000562118 ZNF586Q9NXT0 402 aa9.85□□□□□ -0.83
CDH1-204ENST00000562118 A0A0D9SG52 128 aa9.84□□□□□ -0.83
CDH1-204ENST00000562118 A0A0J9YX75 114 aa9.84□□□□□ -0.83
CDH1-204ENST00000562118 A0A1B0GVG6 124 aa9.84□□□□□ -0.83
CDH1-204ENST00000562118 SLC17A3O00476 420 aa9.84□□□□□ -0.83
CDH1-204ENST00000562118 NDUFB4O95168 129 aa9.84□□□□□ -0.83
CDH1-204ENST00000562118 HIST1H1EP10412 219 aaKnown RBP9.84□□□□□ -0.83
CDH1-204ENST00000562118 SPP1P10451 314 aa9.84□□□□□ -0.83
CDH1-204ENST00000562118 GDF5OSQ5U4N7 250 aa9.84□□□□□ -0.83
CDH1-204ENST00000562118 HSD17B11Q8NBQ5 300 aa9.84□□□□□ -0.83
CDH1-204ENST00000562118 FXYD5Q96DB9 178 aa9.84□□□□□ -0.83
CDH1-204ENST00000562118 C16orf92Q96LL3 132 aa9.84□□□□□ -0.83
CDH1-204ENST00000562118 SH3BGRL3Q9H299 93 aa9.84□□□□□ -0.83
CDH1-204ENST00000562118 CLEC5AQ9NY25 188 aa9.84□□□□□ -0.83
CDH1-204ENST00000562118 BORCS7-ASMTA0A0B4J1R7 106 aa9.83□□□□□ -0.84
CDH1-204ENST00000562118 KNCNA6PVL3 124 aa9.83□□□□□ -0.84
CDH1-204ENST00000562118 RHOBP62745 196 aa9.83□□□□□ -0.84
CDH1-204ENST00000562118 ACOT6Q3I5F7 207 aaPredicted RBP9.83□□□□□ -0.84
CDH1-204ENST00000562118 TMEM41BQ5BJD5 291 aa9.83□□□□□ -0.84
CDH1-204ENST00000562118 MORN3Q6PF18 240 aaPredicted RBP9.83□□□□□ -0.84
CDH1-204ENST00000562118 STHQ8IWL8 128 aa9.83□□□□□ -0.84
CDH1-204ENST00000562118 RPP25LQ8N5L8 163 aaKnown RBP9.83□□□□□ -0.84
CDH1-204ENST00000562118 SUN5Q8TC36 379 aa9.83□□□□□ -0.84
CDH1-204ENST00000562118 MRPL53Q96EL3 112 aaKnown RBP9.83□□□□□ -0.84
CDH1-204ENST00000562118 ARPC5LQ9BPX5 153 aa9.83□□□□□ -0.84
CDH1-204ENST00000562118 CSTL1Q9H114 145 aa9.83□□□□□ -0.84
CDH1-204ENST00000562118 RPRMQ9NS64 109 aa9.83□□□□□ -0.84
CDH1-204ENST00000562118 BCL2L11O43521 198 aa9.82□□□□□ -0.84
CDH1-204ENST00000562118 MBP02144 154 aa9.82□□□□□ -0.84
CDH1-204ENST00000562118 PYYP10082 97 aa9.82□□□□□ -0.84
CDH1-204ENST00000562118 C4BPBP20851 252 aa9.82□□□□□ -0.84
CDH1-204ENST00000562118 RAB2AP61019 212 aa9.82□□□□□ -0.84
CDH1-204ENST00000562118 PSG3Q16557 428 aa9.82□□□□□ -0.84
CDH1-204ENST00000562118 ACTL10Q5JWF8 245 aa9.82□□□□□ -0.84
CDH1-204ENST00000562118 AMTNQ6UX39 209 aa9.82□□□□□ -0.84
CDH1-204ENST00000562118 AKAP14Q86UN6 197 aa9.82□□□□□ -0.84
CDH1-204ENST00000562118 CSNK1G2-AS1Q8NCQ2 148 aa9.82□□□□□ -0.84
CDH1-204ENST00000562118 STOML3Q8TAV4 291 aa9.82□□□□□ -0.84
CDH1-204ENST00000562118 RNF183Q96D59 192 aa9.82□□□□□ -0.84
CDH1-204ENST00000562118 OVOL2Q9BRP0 275 aa9.82□□□□□ -0.84
CDH1-204ENST00000562118 ZMAT4Q9H898 229 aa9.82□□□□□ -0.84
CDH1-204ENST00000562118 U3KQK5 164 aa9.82□□□□□ -0.84
CDH1-204ENST00000562118 STAG3L2P0CL84 134 aa9.81□□□□□ -0.84
CDH1-204ENST00000562118 STAG3L3P0CL85 134 aa9.81□□□□□ -0.84
CDH1-204ENST00000562118 RPL35AP18077 110 aaKnown RBP9.81□□□□□ -0.84
CDH1-204ENST00000562118 HLA-DMBP28068 263 aa9.81□□□□□ -0.84
CDH1-204ENST00000562118 DEFB1P60022 68 aa9.81□□□□□ -0.84
CDH1-204ENST00000562118 LGALSLQ3ZCW2 172 aaPredicted RBP9.81□□□□□ -0.84
CDH1-204ENST00000562118 KHDC3LQ587J8 217 aa9.81□□□□□ -0.84
CDH1-204ENST00000562118 PQLC2Q6ZP29 291 aa9.81□□□□□ -0.84
CDH1-204ENST00000562118 RNF182Q8N6D2 247 aa9.81□□□□□ -0.84
CDH1-204ENST00000562118 OR10G4Q8NGN3 311 aa9.81□□□□□ -0.84
CDH1-204ENST00000562118 OR10G9Q8NGN4 311 aa9.81□□□□□ -0.84
CDH1-204ENST00000562118 OR10G7Q8NGN6 311 aa9.81□□□□□ -0.84
CDH1-204ENST00000562118 RCHY1Q96PM5 261 aa9.81□□□□□ -0.84
CDH1-204ENST00000562118 OR51M1Q9H341 326 aa9.81□□□□□ -0.84
CDH1-204ENST00000562118 TAS2R45P59539 299 aa9.8□□□□□ -0.84
CDH1-204ENST00000562118 CD300CQ08708 224 aa9.8□□□□□ -0.84
CDH1-204ENST00000562118 IGFL4Q6B9Z1 124 aa9.8□□□□□ -0.84
CDH1-204ENST00000562118 TMUB2Q71RG4 321 aa9.8□□□□□ -0.84
CDH1-204ENST00000562118 HYLS1Q96M11 299 aa9.8□□□□□ -0.84
CDH1-204ENST00000562118 LINC00052Q96N35 136 aa9.8□□□□□ -0.84
CDH1-204ENST00000562118 PAXXQ9BUH6 204 aa9.8□□□□□ -0.84
CDH1-204ENST00000562118 EDA2RQ9HAV5 297 aa9.8□□□□□ -0.84
CDH1-204ENST00000562118 DYNC2H1Q8NCM8 4307 aaKnown RBP9.79□□□□□ -0.84
CDH1-204ENST00000562118 hCG_2014768A0A024R1R8 64 aa9.79□□□□□ -0.84
CDH1-204ENST00000562118 F6UB75 175 aa9.79□□□□□ -0.84
CDH1-204ENST00000562118 NBEAP1P0C6P0 100 aa9.79□□□□□ -0.84
CDH1-204ENST00000562118 SEC11BP0C7V7 166 aa9.79□□□□□ -0.84
CDH1-204ENST00000562118 CDC34P49427 236 aaPredicted RBP9.79□□□□□ -0.84
CDH1-204ENST00000562118 PSG9Q00887 426 aa9.79□□□□□ -0.84
CDH1-204ENST00000562118 LYPD1Q8N2G4 141 aa9.79□□□□□ -0.84
CDH1-204ENST00000562118 OR8A1Q8NGG7 326 aa9.79□□□□□ -0.84
CDH1-204ENST00000562118 RNF141Q8WVD5 230 aa9.79□□□□□ -0.84
CDH1-204ENST00000562118 RETNQ9HD89 108 aa9.79□□□□□ -0.84
CDH1-204ENST00000562118 PLA2G2EQ9NZK7 142 aa9.79□□□□□ -0.84
CDH1-204ENST00000562118 PRELID1Q9Y255 219 aa9.79□□□□□ -0.84
CDH1-204ENST00000562118 STARD9Q9P2P6 4700 aa9.79□□□□□ -0.84
CDH1-204ENST00000562118 ZNF705EA8MWA4 302 aaPredicted RBP9.78□□□□□ -0.84
CDH1-204ENST00000562118 H3BTX0 84 aa9.78□□□□□ -0.84
CDH1-204ENST00000562118 CA1P00915 261 aaPredicted RBP9.78□□□□□ -0.84
CDH1-204ENST00000562118 ZNF726P1Q15940 193 aa9.78□□□□□ -0.84
CDH1-204ENST00000562118 DEFB135Q30KP9 77 aa9.78□□□□□ -0.84
CDH1-204ENST00000562118 EBLN2Q6P2I7 272 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms