RNA–Protein interactions for RNA: ENST00000562028.1

DENND4A-204, Transcript of DENN domain containing 4A, humanhuman

TSL 3

Gene DENND4A, Length 481 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND4A-204ENST00000562028 XPNPEP1Q9NQW7 623 aa1.32□□□□□ -2.2
DENND4A-204ENST00000562028 ATPIF1Q9UII2 106 aa1.32□□□□□ -2.2
DENND4A-204ENST00000562028 SLC22A13Q9Y226 551 aa1.32□□□□□ -2.2
DENND4A-204ENST00000562028 PTPRFP10586 1907 aa1.32□□□□□ -2.2
DENND4A-204ENST00000562028 IBTKQ9P2D0 1353 aaPredicted RBP1.32□□□□□ -2.2
DENND4A-204ENST00000562028 TACC2O95359 2948 aa1.32□□□□□ -2.2
DENND4A-204ENST00000562028 HERC1Q15751 4861 aa1.32□□□□□ -2.2
DENND4A-204ENST00000562028 ANKRD36CQ5JPF3 1778 aa1.31□□□□□ -2.2
DENND4A-204ENST00000562028 NUP98P52948 1817 aa1.31□□□□□ -2.2
DENND4A-204ENST00000562028 MAP1AP78559 2803 aaPredicted RBP1.31□□□□□ -2.2
DENND4A-204ENST00000562028 DOCK1Q14185 1865 aa1.31□□□□□ -2.2
DENND4A-204ENST00000562028 NSD1Q96L73 2696 aaPredicted RBP1.31□□□□□ -2.2
DENND4A-204ENST00000562028 CSPG4Q6UVK1 2322 aa1.31□□□□□ -2.2
DENND4A-204ENST00000562028 ZFC3H1O60293 1989 aaKnown RBP1.31□□□□□ -2.2
DENND4A-204ENST00000562028 SCN10AQ9Y5Y9 1956 aa1.31□□□□□ -2.2
DENND4A-204ENST00000562028 TRBV20OR9-2A0A075B6H5 130 aa1.31□□□□□ -2.2
DENND4A-204ENST00000562028 A0A0J9YY10 115 aa1.31□□□□□ -2.2
DENND4A-204ENST00000562028 A0A1B0GX78 115 aa1.31□□□□□ -2.2
DENND4A-204ENST00000562028 KCNK1O00180 336 aa1.31□□□□□ -2.2
DENND4A-204ENST00000562028 HCRTO43612 131 aa1.31□□□□□ -2.2
DENND4A-204ENST00000562028 IFNA5P01569 189 aa1.31□□□□□ -2.2
DENND4A-204ENST00000562028 UBBP0CG47 229 aa1.31□□□□□ -2.2
DENND4A-204ENST00000562028 NKX2-5P52952 324 aaPredicted RBP1.31□□□□□ -2.2
DENND4A-204ENST00000562028 AP3S2P59780 193 aa1.31□□□□□ -2.2
DENND4A-204ENST00000562028 VBP1P61758 197 aa1.31□□□□□ -2.2
DENND4A-204ENST00000562028 DR1Q01658 176 aa1.31□□□□□ -2.2
DENND4A-204ENST00000562028 SPA17Q15506 151 aa1.31□□□□□ -2.2
DENND4A-204ENST00000562028 GUK1Q16774 197 aa1.31□□□□□ -2.2
DENND4A-204ENST00000562028 TET1Q8NFU7 2136 aa1.31□□□□□ -2.2
DENND4A-204ENST00000562028 MED23Q9ULK4 1368 aa1.31□□□□□ -2.2
DENND4A-204ENST00000562028 POLEQ07864 2286 aa1.31□□□□□ -2.2
DENND4A-204ENST00000562028 PLXNA4Q9HCM2 1894 aa1.31□□□□□ -2.2
DENND4A-204ENST00000562028 ROS1P08922 2347 aa1.31□□□□□ -2.2
DENND4A-204ENST00000562028 ACACAQ13085 2346 aa1.31□□□□□ -2.2
DENND4A-204ENST00000562028 MED12LQ86YW9 2145 aa1.3□□□□□ -2.2
DENND4A-204ENST00000562028 IGKV2D-26A0A0A0MRZ7 120 aa1.3□□□□□ -2.2
DENND4A-204ENST00000562028 E5RI56 91 aa1.3□□□□□ -2.2
DENND4A-204ENST00000562028 C5orf67F2Z3F1 127 aa1.3□□□□□ -2.2
DENND4A-204ENST00000562028 TGOLN2O43493 480 aa1.3□□□□□ -2.2
DENND4A-204ENST00000562028 CALB1P05937 261 aa1.3□□□□□ -2.2
DENND4A-204ENST00000562028 CTXN2P0C2S0 81 aa1.3□□□□□ -2.2
DENND4A-204ENST00000562028 RPS4Y1P22090 263 aaKnown RBP1.3□□□□□ -2.2
DENND4A-204ENST00000562028 OMPP47874 163 aa1.3□□□□□ -2.2
DENND4A-204ENST00000562028 EIF2B2P49770 351 aaKnown RBP1.3□□□□□ -2.2
DENND4A-204ENST00000562028 TCL1AP56279 114 aa1.3□□□□□ -2.2
DENND4A-204ENST00000562028 CCL7P80098 99 aa1.3□□□□□ -2.2
DENND4A-204ENST00000562028 GRK1Q15835 563 aa1.3□□□□□ -2.2
DENND4A-204ENST00000562028 CDC26Q8NHZ8 85 aa1.3□□□□□ -2.2
DENND4A-204ENST00000562028 PTH2Q96A98 100 aa1.3□□□□□ -2.2
DENND4A-204ENST00000562028 CCDC42Q96M95 316 aa1.3□□□□□ -2.2
DENND4A-204ENST00000562028 C9orf16Q9BUW7 83 aa1.3□□□□□ -2.2
DENND4A-204ENST00000562028 REG4Q9BYZ8 158 aa1.3□□□□□ -2.2
DENND4A-204ENST00000562028 CISHQ9NSE2 258 aa1.3□□□□□ -2.2
DENND4A-204ENST00000562028 STOML2Q9UJZ1 356 aa1.3□□□□□ -2.2
DENND4A-204ENST00000562028 GUCA1BQ9UMX6 200 aa1.3□□□□□ -2.2
DENND4A-204ENST00000562028 LSM5Q9Y4Y9 91 aaKnown RBP1.3□□□□□ -2.2
DENND4A-204ENST00000562028 MXRA5Q9NR99 2828 aa1.3□□□□□ -2.2
DENND4A-204ENST00000562028 ZNF236Q9UL36 1845 aa1.29□□□□□ -2.2
DENND4A-204ENST00000562028 TMEM114B3SHH9 223 aa1.29□□□□□ -2.2
DENND4A-204ENST00000562028 OR5F1O95221 314 aa1.29□□□□□ -2.2
DENND4A-204ENST00000562028 CLPSP04118 112 aa1.29□□□□□ -2.2
DENND4A-204ENST00000562028 IFNA6P05013 189 aa1.29□□□□□ -2.2
DENND4A-204ENST00000562028 OR5G3P0C626 314 aa1.29□□□□□ -2.2
DENND4A-204ENST00000562028 PRB4P10163 310 aaPredicted RBP1.29□□□□□ -2.2
DENND4A-204ENST00000562028 PMAIP1Q13794 54 aa1.29□□□□□ -2.2
DENND4A-204ENST00000562028 SNCBQ16143 134 aa1.29□□□□□ -2.2
DENND4A-204ENST00000562028 HIST3H3Q16695 136 aa1.29□□□□□ -2.2
DENND4A-204ENST00000562028 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP1.29□□□□□ -2.2
DENND4A-204ENST00000562028 TRAPPC5Q8IUR0 188 aa1.29□□□□□ -2.2
DENND4A-204ENST00000562028 C12orf29Q8N999 325 aa1.29□□□□□ -2.2
DENND4A-204ENST00000562028 SREK1IP1Q8N9Q2 155 aaPredicted RBP1.29□□□□□ -2.2
DENND4A-204ENST00000562028 SELENOSQ9BQE4 189 aa1.29□□□□□ -2.2
DENND4A-204ENST00000562028 WDR61Q9GZS3 305 aaKnown RBP1.29□□□□□ -2.2
DENND4A-204ENST00000562028 V9GYQ6 96 aa1.29□□□□□ -2.2
DENND4A-204ENST00000562028 SPTBN1Q01082 2364 aaKnown RBP1.29□□□□□ -2.2
DENND4A-204ENST00000562028 MGAM2Q2M2H8 2515 aa1.29□□□□□ -2.2
DENND4A-204ENST00000562028 TENM2Q9NT68 2774 aa1.29□□□□□ -2.2
DENND4A-204ENST00000562028 ACANP16112 2415 aa1.28□□□□□ -2.2
DENND4A-204ENST00000562028 VPS13CQ709C8 3753 aa1.28□□□□□ -2.2
DENND4A-204ENST00000562028 TMEM212A6NML5 194 aa1.28□□□□□ -2.2
DENND4A-204ENST00000562028 IFNA16P05015 189 aa1.28□□□□□ -2.2
DENND4A-204ENST00000562028 RNASE3P12724 160 aaKnown RBP1.28□□□□□ -2.2
DENND4A-204ENST00000562028 HSD11B1P28845 292 aa1.28□□□□□ -2.2
DENND4A-204ENST00000562028 SULT1A1P50225 295 aa1.28□□□□□ -2.2
DENND4A-204ENST00000562028 B2MP61769 119 aa1.28□□□□□ -2.2
DENND4A-204ENST00000562028 RUNX1Q01196 453 aa1.28□□□□□ -2.2
DENND4A-204ENST00000562028 IFITM2Q01629 132 aa1.28□□□□□ -2.2
DENND4A-204ENST00000562028 HIST2H3PS2Q5TEC6 136 aa1.28□□□□□ -2.2
DENND4A-204ENST00000562028 Q6ZS49 121 aa1.28□□□□□ -2.2
DENND4A-204ENST00000562028 C1orf158Q8N1D5 194 aa1.28□□□□□ -2.2
DENND4A-204ENST00000562028 RASSF5Q8WWW0 418 aa1.28□□□□□ -2.2
DENND4A-204ENST00000562028 IMP4Q96G21 291 aaKnown RBP1.28□□□□□ -2.2
DENND4A-204ENST00000562028 SERPINI1Q99574 410 aa1.28□□□□□ -2.2
DENND4A-204ENST00000562028 ARL2BPQ9Y2Y0 163 aa1.28□□□□□ -2.2
DENND4A-204ENST00000562028 MICAL3Q7RTP6 2002 aa1.28□□□□□ -2.2
DENND4A-204ENST00000562028 RP1P56715 2156 aa1.27□□□□□ -2.21
DENND4A-204ENST00000562028 ALPK2Q86TB3 2170 aa1.27□□□□□ -2.21
DENND4A-204ENST00000562028 ROBO3Q96MS0 1386 aa1.27□□□□□ -2.21
DENND4A-204ENST00000562028 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP1.27□□□□□ -2.21
DENND4A-204ENST00000562028 OR2B3O76000 313 aa1.27□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms