RNA–Protein interactions for RNA: ENST00000561076.1

RTF1-207, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 3

Gene RTF1, Length 314 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-207ENST00000561076 CKS2P33552 79 aa1.32□□□□□ -2.2
RTF1-207ENST00000561076 RNASE4P34096 147 aaKnown RBP1.32□□□□□ -2.2
RTF1-207ENST00000561076 FUSP35637 526 aaKnown RBP eCLIP1.32□□□□□ -2.2
RTF1-207ENST00000561076 QRFPP83859 136 aa1.32□□□□□ -2.2
RTF1-207ENST00000561076 NDPQ00604 133 aa1.32□□□□□ -2.2
RTF1-207ENST00000561076 PLGLB1Q02325 96 aa1.32□□□□□ -2.2
RTF1-207ENST00000561076 CDK5R1Q15078 307 aa1.32□□□□□ -2.2
RTF1-207ENST00000561076 KISS1Q15726 138 aa1.32□□□□□ -2.2
RTF1-207ENST00000561076 CCSMST1Q4G0I0 132 aa1.32□□□□□ -2.2
RTF1-207ENST00000561076 PYDC2Q56P42 97 aa1.32□□□□□ -2.2
RTF1-207ENST00000561076 MEIG1Q5JSS6 88 aa1.32□□□□□ -2.2
RTF1-207ENST00000561076 CLLU1Q5K131 121 aa1.32□□□□□ -2.2
RTF1-207ENST00000561076 LINC01545Q5VT33 79 aa1.32□□□□□ -2.2
RTF1-207ENST00000561076 SCIMPQ6UWF3 145 aa1.32□□□□□ -2.2
RTF1-207ENST00000561076 GLIPR1L1Q6UWM5 242 aa1.32□□□□□ -2.2
RTF1-207ENST00000561076 LCN15Q6UWW0 184 aa1.32□□□□□ -2.2
RTF1-207ENST00000561076 ABCA7Q8IZY2 2146 aa1.32□□□□□ -2.2
RTF1-207ENST00000561076 ACBD7Q8N6N7 88 aa1.32□□□□□ -2.2
RTF1-207ENST00000561076 LINC00301Q8NCQ3 95 aa1.32□□□□□ -2.2
RTF1-207ENST00000561076 MORN4Q8NDC4 146 aa1.32□□□□□ -2.2
RTF1-207ENST00000561076 OR2T35Q8NGX2 323 aa1.32□□□□□ -2.2
RTF1-207ENST00000561076 CMTM2Q8TAZ6 248 aa1.32□□□□□ -2.2
RTF1-207ENST00000561076 NAT14Q8WUY8 206 aa1.32□□□□□ -2.2
RTF1-207ENST00000561076 PSMF1Q92530 271 aa1.32□□□□□ -2.2
RTF1-207ENST00000561076 OR4C12Q96R67 309 aa1.32□□□□□ -2.2
RTF1-207ENST00000561076 Q9H521 79 aa1.32□□□□□ -2.2
RTF1-207ENST00000561076 C14orf132Q9NPU4 83 aa1.32□□□□□ -2.2
RTF1-207ENST00000561076 NIT2Q9NQR4 276 aa1.32□□□□□ -2.2
RTF1-207ENST00000561076 NDUFB11Q9NX14 153 aa1.32□□□□□ -2.2
RTF1-207ENST00000561076 TAS2R4Q9NYW5 299 aa1.32□□□□□ -2.2
RTF1-207ENST00000561076 TP53TG3Q9ULZ0 132 aa1.32□□□□□ -2.2
RTF1-207ENST00000561076 ZNF443Q9Y2A4 671 aaPredicted RBP1.32□□□□□ -2.2
RTF1-207ENST00000561076 S4R3C0 116 aa1.32□□□□□ -2.2
RTF1-207ENST00000561076 ADGRB2O60241 1585 aa1.32□□□□□ -2.2
RTF1-207ENST00000561076 PLXNC1O60486 1568 aa1.32□□□□□ -2.2
RTF1-207ENST00000561076 DIP2AQ14689 1571 aa1.32□□□□□ -2.2
RTF1-207ENST00000561076 MYH3P11055 1940 aa1.32□□□□□ -2.2
RTF1-207ENST00000561076 YLPM1P49750 1951 aaKnown RBP1.32□□□□□ -2.2
RTF1-207ENST00000561076 TET3O43151 1660 aa1.32□□□□□ -2.2
RTF1-207ENST00000561076 KDM5AP29375 1690 aaKnown RBP1.32□□□□□ -2.2
RTF1-207ENST00000561076 TNKS1BP1Q9C0C2 1729 aaKnown RBP1.32□□□□□ -2.2
RTF1-207ENST00000561076 ABCC5O15440 1437 aa1.32□□□□□ -2.2
RTF1-207ENST00000561076 TNS3Q68CZ2 1445 aa1.32□□□□□ -2.2
RTF1-207ENST00000561076 MYOM2P54296 1465 aa1.31□□□□□ -2.2
RTF1-207ENST00000561076 CCDC141Q6ZP82 1450 aa1.31□□□□□ -2.2
RTF1-207ENST00000561076 MYH2Q9UKX2 1941 aa1.31□□□□□ -2.2
RTF1-207ENST00000561076 IGHV3-64A0A075B6Q5 118 aa1.31□□□□□ -2.2
RTF1-207ENST00000561076 A0A0J9YX75 114 aa1.31□□□□□ -2.2
RTF1-207ENST00000561076 C9orf170A2RU37 121 aa1.31□□□□□ -2.2
RTF1-207ENST00000561076 C17orf98A8MV24 154 aa1.31□□□□□ -2.2
RTF1-207ENST00000561076 ZNF705FA8MVS1 300 aaPredicted RBP1.31□□□□□ -2.2
RTF1-207ENST00000561076 CGAP01215 116 aa1.31□□□□□ -2.2
RTF1-207ENST00000561076 IGKV1-16P04430 117 aa1.31□□□□□ -2.2
RTF1-207ENST00000561076 SLC25A5P05141 298 aaKnown RBP1.31□□□□□ -2.2
RTF1-207ENST00000561076 DNAH10OSP0CZ25 163 aa1.31□□□□□ -2.2
RTF1-207ENST00000561076 CRYGAP11844 174 aa1.31□□□□□ -2.2
RTF1-207ENST00000561076 HIST1H1DP16402 221 aaKnown RBP1.31□□□□□ -2.2
RTF1-207ENST00000561076 MDKP21741 143 aaPredicted RBP1.31□□□□□ -2.2
RTF1-207ENST00000561076 COL8A2P25067 703 aa1.31□□□□□ -2.2
RTF1-207ENST00000561076 PEBP1P30086 187 aaKnown RBP1.31□□□□□ -2.2
RTF1-207ENST00000561076 FOXA1P55317 472 aa1.31□□□□□ -2.2
RTF1-207ENST00000561076 FOXA3P55318 350 aaPredicted RBP1.31□□□□□ -2.2
RTF1-207ENST00000561076 PKIAP61925 76 aa1.31□□□□□ -2.2
RTF1-207ENST00000561076 SNRPD3P62318 126 aaKnown RBP1.31□□□□□ -2.2
RTF1-207ENST00000561076 BLCAPP62952 87 aa1.31□□□□□ -2.2
RTF1-207ENST00000561076 ESRGQ1W209 222 aa1.31□□□□□ -2.2
RTF1-207ENST00000561076 FAM229BQ4G0N7 80 aa1.31□□□□□ -2.2
RTF1-207ENST00000561076 FAM27BQ5VT28 67 aa1.31□□□□□ -2.2
RTF1-207ENST00000561076 KRTAP7-1Q8IUC3 87 aa1.31□□□□□ -2.2
RTF1-207ENST00000561076 DYNAPQ8N1N2 210 aa1.31□□□□□ -2.2
RTF1-207ENST00000561076 SVBPQ8N300 66 aa1.31□□□□□ -2.2
RTF1-207ENST00000561076 C10orf111Q8N326 155 aa1.31□□□□□ -2.2
RTF1-207ENST00000561076 LINC00612Q8N6U2 182 aa1.31□□□□□ -2.2
RTF1-207ENST00000561076 Q8N9L7 120 aa1.31□□□□□ -2.2
RTF1-207ENST00000561076 C9orf106Q8NAJ2 232 aa1.31□□□□□ -2.2
RTF1-207ENST00000561076 PLPP5Q8NEB5 264 aa1.31□□□□□ -2.2
RTF1-207ENST00000561076 C1orf64Q8NEQ6 169 aa1.31□□□□□ -2.2
RTF1-207ENST00000561076 OR4X2Q8NGF9 303 aa1.31□□□□□ -2.2
RTF1-207ENST00000561076 TMEM254Q8TBM7 123 aa1.31□□□□□ -2.2
RTF1-207ENST00000561076 ZNF431Q8TF32 576 aaPredicted RBP1.31□□□□□ -2.2
RTF1-207ENST00000561076 PP6455Q8WZ26 134 aa1.31□□□□□ -2.2
RTF1-207ENST00000561076 ZC2HC1AQ96GY0 325 aa1.31□□□□□ -2.2
RTF1-207ENST00000561076 C14orf144Q96I85 54 aa1.31□□□□□ -2.2
RTF1-207ENST00000561076 PKMYT1Q99640 499 aa1.31□□□□□ -2.2
RTF1-207ENST00000561076 SMIM7Q9BQ49 75 aa1.31□□□□□ -2.2
RTF1-207ENST00000561076 CST11Q9H112 138 aa1.31□□□□□ -2.2
RTF1-207ENST00000561076 SLC35B3Q9H1N7 401 aa1.31□□□□□ -2.2
RTF1-207ENST00000561076 CST9LQ9H4G1 147 aa1.31□□□□□ -2.2
RTF1-207ENST00000561076 NAA60Q9H7X0 242 aa1.31□□□□□ -2.2
RTF1-207ENST00000561076 SCN3BQ9NY72 215 aa1.31□□□□□ -2.2
RTF1-207ENST00000561076 COA4Q9NYJ1 87 aa1.31□□□□□ -2.2
RTF1-207ENST00000561076 KLK12Q9UKR0 248 aa1.31□□□□□ -2.2
RTF1-207ENST00000561076 KIF25-AS1Q9Y6Z4 181 aa1.31□□□□□ -2.2
RTF1-207ENST00000561076 MINOS1-NBL1R4GNA1 71 aa1.31□□□□□ -2.2
RTF1-207ENST00000561076 ZC3H13Q5T200 1668 aaKnown RBP1.31□□□□□ -2.2
RTF1-207ENST00000561076 ADGBQ8N7X0 1667 aa1.31□□□□□ -2.2
RTF1-207ENST00000561076 ATG2BQ96BY7 2078 aa1.31□□□□□ -2.2
RTF1-207ENST00000561076 KTN1Q86UP2 1357 aaKnown RBP1.31□□□□□ -2.2
RTF1-207ENST00000561076 EEA1Q15075 1411 aa1.31□□□□□ -2.2
RTF1-207ENST00000561076 ADGRL2O95490 1459 aa1.31□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 100.3 ms