RNA–Protein interactions for RNA: ENST00000560861.1

SNX1-212, Transcript of sorting nexin 1, humanhuman

TSL 3

Gene SNX1, Length 850 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-212ENST00000560861 SCO2A0A1W2PP80 73 aa8.58□□□□□ -1.04
SNX1-212ENST00000560861 LINC01619G3V211 115 aa8.58□□□□□ -1.04
SNX1-212ENST00000560861 ZNF253O75346 499 aa8.58□□□□□ -1.04
SNX1-212ENST00000560861 SUMO1P63165 101 aaKnown RBP8.58□□□□□ -1.04
SNX1-212ENST00000560861 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.58□□□□□ -1.04
SNX1-212ENST00000560861 C8orf86Q6ZUL3 223 aa8.58□□□□□ -1.04
SNX1-212ENST00000560861 OR8I2Q8N0Y5 310 aa8.58□□□□□ -1.04
SNX1-212ENST00000560861 LYPD1Q8N2G4 141 aa8.58□□□□□ -1.04
SNX1-212ENST00000560861 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.58□□□□□ -1.04
SNX1-212ENST00000560861 KLHL30-AS1Q8NEE0 82 aa8.58□□□□□ -1.04
SNX1-212ENST00000560861 OR1N2Q8NGR9 330 aa8.58□□□□□ -1.04
SNX1-212ENST00000560861 C2CD4CQ8TF44 421 aa8.58□□□□□ -1.04
SNX1-212ENST00000560861 BLNKQ8WV28 456 aa8.58□□□□□ -1.04
SNX1-212ENST00000560861 RAX2Q96IS3 184 aa8.58□□□□□ -1.04
SNX1-212ENST00000560861 TCEAL7Q9BRU2 100 aa8.58□□□□□ -1.04
SNX1-212ENST00000560861 PARLQ9H300 379 aa8.58□□□□□ -1.04
SNX1-212ENST00000560861 Q9H3A6 140 aa8.58□□□□□ -1.04
SNX1-212ENST00000560861 OTORQ9NRC9 128 aa8.58□□□□□ -1.04
SNX1-212ENST00000560861 UFC1Q9Y3C8 167 aa8.58□□□□□ -1.04
SNX1-212ENST00000560861 TSSC4Q9Y5U2 329 aaPredicted RBP8.58□□□□□ -1.04
SNX1-212ENST00000560861 WNK1Q9H4A3 2382 aa8.57□□□□□ -1.04
SNX1-212ENST00000560861 IGHV3-66A0A0C4DH42 116 aa8.57□□□□□ -1.04
SNX1-212ENST00000560861 ZNF320A2RRD8 509 aa8.57□□□□□ -1.04
SNX1-212ENST00000560861 CHEK1O14757 476 aa8.57□□□□□ -1.04
SNX1-212ENST00000560861 APOC3P02656 99 aa8.57□□□□□ -1.04
SNX1-212ENST00000560861 SLURP1P55000 103 aa8.57□□□□□ -1.04
SNX1-212ENST00000560861 RANP62826 216 aaKnown RBP8.57□□□□□ -1.04
SNX1-212ENST00000560861 ADAMTSL5Q6ZMM2 481 aa8.57□□□□□ -1.04
SNX1-212ENST00000560861 C11orf44Q8N8P7 122 aa8.57□□□□□ -1.04
SNX1-212ENST00000560861 OR11H1Q8NG94 326 aa8.57□□□□□ -1.04
SNX1-212ENST00000560861 DERL1Q9BUN8 251 aa8.57□□□□□ -1.04
SNX1-212ENST00000560861 TRBV20OR9-2A0A075B6H5 130 aa8.56□□□□□ -1.04
SNX1-212ENST00000560861 TRAV8-2A0A0B4J237 113 aa8.56□□□□□ -1.04
SNX1-212ENST00000560861 PGPA6NDG6 321 aa8.56□□□□□ -1.04
SNX1-212ENST00000560861 C2orf70A6NJV1 201 aa8.56□□□□□ -1.04
SNX1-212ENST00000560861 SOCS3O14543 225 aa8.56□□□□□ -1.04
SNX1-212ENST00000560861 GALR1P47211 349 aa8.56□□□□□ -1.04
SNX1-212ENST00000560861 SYNJ2BPP57105 145 aa8.56□□□□□ -1.04
SNX1-212ENST00000560861 FAM74A3Q4VXF1 159 aa8.56□□□□□ -1.04
SNX1-212ENST00000560861 KHDC1LQ5JSQ8 128 aa8.56□□□□□ -1.04
SNX1-212ENST00000560861 ATRAIDQ6UW56 229 aa8.56□□□□□ -1.04
SNX1-212ENST00000560861 C5orf17Q8NAS9 161 aa8.56□□□□□ -1.04
SNX1-212ENST00000560861 DUX3Q96PT4 197 aa8.56□□□□□ -1.04
SNX1-212ENST00000560861 RHPN1-AS1Q9BWJ2 59 aa8.56□□□□□ -1.04
SNX1-212ENST00000560861 ZNF331Q9NQX6 463 aaPredicted RBP8.56□□□□□ -1.04
SNX1-212ENST00000560861 A0A1W2PS18 150 aa8.55□□□□□ -1.04
SNX1-212ENST00000560861 PEX7O00628 323 aa8.55□□□□□ -1.04
SNX1-212ENST00000560861 ATF4P18848 351 aaPredicted RBP8.55□□□□□ -1.04
SNX1-212ENST00000560861 MEOX2P50222 304 aa8.55□□□□□ -1.04
SNX1-212ENST00000560861 GNG5P63218 68 aa8.55□□□□□ -1.04
SNX1-212ENST00000560861 EXOC3-AS1Q8N2X6 119 aa8.55□□□□□ -1.04
SNX1-212ENST00000560861 ARL6IP6Q8N6S5 226 aa8.55□□□□□ -1.04
SNX1-212ENST00000560861 DLX4Q92988 240 aaPredicted RBP8.55□□□□□ -1.04
SNX1-212ENST00000560861 RPUSD4Q96CM3 377 aaKnown RBP8.55□□□□□ -1.04
SNX1-212ENST00000560861 GRAMD2BQ96HH9 432 aa8.55□□□□□ -1.04
SNX1-212ENST00000560861 SDF2L1Q9HCN8 221 aa8.55□□□□□ -1.04
SNX1-212ENST00000560861 EPDR1Q9UM22 224 aa8.55□□□□□ -1.04
SNX1-212ENST00000560861 KLF12Q9Y4X4 402 aa8.55□□□□□ -1.04
SNX1-212ENST00000560861 ZNF727A8MUV8 499 aa8.54□□□□□ -1.04
SNX1-212ENST00000560861 TCRAP04437 139 aa8.54□□□□□ -1.04
SNX1-212ENST00000560861 SLC25A5P05141 298 aaKnown RBP8.54□□□□□ -1.04
SNX1-212ENST00000560861 CEBPGP53567 150 aa8.54□□□□□ -1.04
SNX1-212ENST00000560861 PSG9Q00887 426 aa8.54□□□□□ -1.04
SNX1-212ENST00000560861 SVBPQ8N300 66 aa8.54□□□□□ -1.04
SNX1-212ENST00000560861 CLRN3Q8NCR9 226 aa8.54□□□□□ -1.04
SNX1-212ENST00000560861 DPF1Q92782 380 aa8.54□□□□□ -1.04
SNX1-212ENST00000560861 HIST1H2BAQ96A08 127 aa8.54□□□□□ -1.04
SNX1-212ENST00000560861 IGF2BP2-AS1Q96M15 143 aa8.54□□□□□ -1.04
SNX1-212ENST00000560861 SMIM7Q9BQ49 75 aa8.54□□□□□ -1.04
SNX1-212ENST00000560861 TRBV6-1A0A0K0K1D8 114 aa8.53□□□□□ -1.04
SNX1-212ENST00000560861 A0A1W2PRX2 142 aa8.53□□□□□ -1.04
SNX1-212ENST00000560861 HELTA6NFD8 242 aa8.53□□□□□ -1.04
SNX1-212ENST00000560861 ZNF785A8K8V0 405 aa8.53□□□□□ -1.04
SNX1-212ENST00000560861 C9JCJ5 164 aa8.53□□□□□ -1.04
SNX1-212ENST00000560861 M0R3E3 92 aa8.53□□□□□ -1.04
SNX1-212ENST00000560861 CCL24O00175 119 aa8.53□□□□□ -1.04
SNX1-212ENST00000560861 IGLV2-11P01706 119 aa8.53□□□□□ -1.04
SNX1-212ENST00000560861 IGLV2-8P01709 118 aa8.53□□□□□ -1.04
SNX1-212ENST00000560861 CSN3P07498 182 aa8.53□□□□□ -1.04
SNX1-212ENST00000560861 CBLN1P23435 193 aa8.53□□□□□ -1.04
SNX1-212ENST00000560861 RPL35P42766 123 aaKnown RBP8.53□□□□□ -1.04
SNX1-212ENST00000560861 FOXL1Q12952 345 aa8.53□□□□□ -1.04
SNX1-212ENST00000560861 NDUFA11Q86Y39 141 aa8.53□□□□□ -1.04
SNX1-212ENST00000560861 OR9G4Q8NGQ1 327 aa8.53□□□□□ -1.04
SNX1-212ENST00000560861 TVP23CQ96ET8 276 aa8.53□□□□□ -1.04
SNX1-212ENST00000560861 MDFIQ99750 246 aa8.53□□□□□ -1.04
SNX1-212ENST00000560861 SLC50A1Q9BRV3 221 aa8.53□□□□□ -1.04
SNX1-212ENST00000560861 ATG101Q9BSB4 218 aa8.53□□□□□ -1.04
SNX1-212ENST00000560861 NAT8Q9UHE5 227 aa8.53□□□□□ -1.04
SNX1-212ENST00000560861 DIRC3C9JPN6 131 aa8.52□□□□□ -1.05
SNX1-212ENST00000560861 SNAPINO95295 136 aa8.52□□□□□ -1.05
SNX1-212ENST00000560861 FOLR2P14207 255 aa8.52□□□□□ -1.05
SNX1-212ENST00000560861 HLA-DMBP28068 263 aa8.52□□□□□ -1.05
SNX1-212ENST00000560861 BMI1P35226 326 aa8.52□□□□□ -1.05
SNX1-212ENST00000560861 AKR1C3P42330 323 aa8.52□□□□□ -1.05
SNX1-212ENST00000560861 TAS2R60P59551 318 aa8.52□□□□□ -1.05
SNX1-212ENST00000560861 RPL23P62829 140 aaKnown RBP8.52□□□□□ -1.05
SNX1-212ENST00000560861 TMEM183BQ1AE95 376 aa8.52□□□□□ -1.05
SNX1-212ENST00000560861 TMEM241Q24JQ0 296 aa8.52□□□□□ -1.05
SNX1-212ENST00000560861 ZNF674Q2M3X9 581 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms