RNA–Protein interactions for RNA: ENST00000560842.1

PSMA4-221, Transcript of proteasome subunit alpha 4, humanhuman

TSL 1 (best)

Gene PSMA4, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMA4-221ENST00000560842 MYO5AQ9Y4I1 1855 aaKnown RBP-0.12□□□□□ -2.43
PSMA4-221ENST00000560842 HSPE1P61604 102 aaKnown RBP-0.12□□□□□ -2.43
PSMA4-221ENST00000560842 PTPRZ1P23471 2315 aaPredicted RBP-0.12□□□□□ -2.43
PSMA4-221ENST00000560842 NCAPD3P42695 1498 aa-0.13□□□□□ -2.43
PSMA4-221ENST00000560842 NUPR2A6NF83 97 aa-0.13□□□□□ -2.43
PSMA4-221ENST00000560842 CTXN2P0C2S0 81 aa-0.13□□□□□ -2.43
PSMA4-221ENST00000560842 FXYD6P3P58550 94 aa-0.13□□□□□ -2.43
PSMA4-221ENST00000560842 ARL5AQ9Y689 179 aa-0.13□□□□□ -2.43
PSMA4-221ENST00000560842 NUP210LQ5VU65 1888 aa-0.14□□□□□ -2.43
PSMA4-221ENST00000560842 FRMPD1Q5SYB0 1578 aa-0.14□□□□□ -2.43
PSMA4-221ENST00000560842 ZNF727A8MUV8 499 aa-0.14□□□□□ -2.43
PSMA4-221ENST00000560842 CRHP06850 196 aa-0.14□□□□□ -2.43
PSMA4-221ENST00000560842 VBP1P61758 197 aa-0.14□□□□□ -2.43
PSMA4-221ENST00000560842 EIF3IQ13347 325 aaKnown RBP-0.14□□□□□ -2.43
PSMA4-221ENST00000560842 SPA17Q15506 151 aa-0.14□□□□□ -2.43
PSMA4-221ENST00000560842 CHCHD1Q96BP2 118 aaKnown RBP-0.14□□□□□ -2.43
PSMA4-221ENST00000560842 TCEAL2Q9H3H9 227 aaPredicted RBP-0.14□□□□□ -2.43
PSMA4-221ENST00000560842 MIA2Q96PC5 1412 aa-0.14□□□□□ -2.43
PSMA4-221ENST00000560842 FREM3P0C091 2139 aa-0.14□□□□□ -2.43
PSMA4-221ENST00000560842 PTPRDP23468 1912 aa-0.15□□□□□ -2.43
PSMA4-221ENST00000560842 DOCK4Q8N1I0 1966 aa-0.15□□□□□ -2.43
PSMA4-221ENST00000560842 CAMSAP1Q5T5Y3 1602 aa-0.15□□□□□ -2.43
PSMA4-221ENST00000560842 TRAV23DV6A0A075B6W5 121 aa-0.15□□□□□ -2.43
PSMA4-221ENST00000560842 HMGB3O15347 200 aaKnown RBP-0.15□□□□□ -2.43
PSMA4-221ENST00000560842 CST8O60676 142 aa-0.15□□□□□ -2.43
PSMA4-221ENST00000560842 IGHV3-33P01772 117 aa-0.15□□□□□ -2.43
PSMA4-221ENST00000560842 FXYD4P59646 89 aa-0.15□□□□□ -2.43
PSMA4-221ENST00000560842 Q6ZQY7 126 aa-0.15□□□□□ -2.43
PSMA4-221ENST00000560842 PLAC4Q8WY50 150 aa-0.15□□□□□ -2.43
PSMA4-221ENST00000560842 POPDC3Q9HBV1 291 aa-0.15□□□□□ -2.43
PSMA4-221ENST00000560842 FAM32AQ9Y421 112 aaKnown RBP-0.15□□□□□ -2.43
PSMA4-221ENST00000560842 ZDBF2Q9HCK1 2354 aa-0.16□□□□□ -2.43
PSMA4-221ENST00000560842 KDELR1P24390 212 aa-0.16□□□□□ -2.44
PSMA4-221ENST00000560842 TAF1AQ15573 450 aaPredicted RBP-0.16□□□□□ -2.44
PSMA4-221ENST00000560842 AKIRIN2Q53H80 203 aa-0.16□□□□□ -2.44
PSMA4-221ENST00000560842 SPINK6Q6UWN8 80 aa-0.16□□□□□ -2.44
PSMA4-221ENST00000560842 ENY2Q9NPA8 101 aa-0.16□□□□□ -2.44
PSMA4-221ENST00000560842 FSIP2Q5CZC0 6907 aa-0.17□□□□□ -2.44
PSMA4-221ENST00000560842 NFYBP25208 207 aa-0.17□□□□□ -2.44
PSMA4-221ENST00000560842 S100A7AQ86SG5 101 aa-0.17□□□□□ -2.44
PSMA4-221ENST00000560842 ASB4Q9Y574 426 aa-0.17□□□□□ -2.44
PSMA4-221ENST00000560842 ZGRF1Q86YA3 2104 aa-0.17□□□□□ -2.44
PSMA4-221ENST00000560842 SSPOA2VEC9 5147 aa-0.17□□□□□ -2.44
PSMA4-221ENST00000560842 ZFYVE26Q68DK2 2539 aa-0.18□□□□□ -2.44
PSMA4-221ENST00000560842 LOC285556D6RIA3 1793 aa-0.18□□□□□ -2.44
PSMA4-221ENST00000560842 hDV103S1A0JD37 113 aa-0.18□□□□□ -2.44
PSMA4-221ENST00000560842 C9orf170A2RU37 121 aa-0.18□□□□□ -2.44
PSMA4-221ENST00000560842 OCIAD2Q56VL3 154 aa-0.18□□□□□ -2.44
PSMA4-221ENST00000560842 LINC00299Q6ZSB3 139 aa-0.18□□□□□ -2.44
PSMA4-221ENST00000560842 CACYBPQ9HB71 228 aaKnown RBP-0.18□□□□□ -2.44
PSMA4-221ENST00000560842 ARMC1Q9NVT9 282 aa-0.18□□□□□ -2.44
PSMA4-221ENST00000560842 OPTCQ9UBM4 332 aa-0.18□□□□□ -2.44
PSMA4-221ENST00000560842 TPRP12270 2363 aaKnown RBP-0.18□□□□□ -2.44
PSMA4-221ENST00000560842 A6NN06 94 aa-0.19□□□□□ -2.44
PSMA4-221ENST00000560842 INSL3P51460 131 aa-0.19□□□□□ -2.44
PSMA4-221ENST00000560842 NCALDP61601 193 aa-0.19□□□□□ -2.44
PSMA4-221ENST00000560842 KLRD1Q13241 179 aa-0.19□□□□□ -2.44
PSMA4-221ENST00000560842 LRRC18Q8N456 261 aa-0.19□□□□□ -2.44
PSMA4-221ENST00000560842 OR4K15Q8NH41 348 aa-0.19□□□□□ -2.44
PSMA4-221ENST00000560842 CCL19Q99731 98 aa-0.19□□□□□ -2.44
PSMA4-221ENST00000560842 IGF2RP11717 2491 aa-0.19□□□□□ -2.44
PSMA4-221ENST00000560842 NCOR2Q9Y618 2525 aa-0.19□□□□□ -2.44
PSMA4-221ENST00000560842 HRNRQ86YZ3 2850 aaPredicted RBP-0.2□□□□□ -2.44
PSMA4-221ENST00000560842 OTOGQ6ZRI0 2925 aa-0.2□□□□□ -2.44
PSMA4-221ENST00000560842 TRAV5A0A0B4J249 113 aa-0.2□□□□□ -2.44
PSMA4-221ENST00000560842 A0A0J9YY99 117 aa-0.2□□□□□ -2.44
PSMA4-221ENST00000560842 DUXBA0A1W2PPF3 345 aa-0.2□□□□□ -2.44
PSMA4-221ENST00000560842 SERPINA1P01009 418 aa-0.2□□□□□ -2.44
PSMA4-221ENST00000560842 FOXI2Q6ZQN5 318 aa-0.2□□□□□ -2.44
PSMA4-221ENST00000560842 PRR15Q8IV56 129 aa-0.2□□□□□ -2.44
PSMA4-221ENST00000560842 ZHX1-C8orf76Q96EF9 292 aa-0.2□□□□□ -2.44
PSMA4-221ENST00000560842 RMND5BQ96G75 393 aaPredicted RBP-0.2□□□□□ -2.44
PSMA4-221ENST00000560842 C9orf16Q9BUW7 83 aa-0.2□□□□□ -2.44
PSMA4-221ENST00000560842 ARL2BPQ9Y2Y0 163 aa-0.2□□□□□ -2.44
PSMA4-221ENST00000560842 N4BP2Q86UW6 1770 aaPredicted RBP-0.2□□□□□ -2.44
PSMA4-221ENST00000560842 PIK3C2AO00443 1686 aa-0.21□□□□□ -2.44
PSMA4-221ENST00000560842 KNTC1P50748 2209 aa-0.21□□□□□ -2.44
PSMA4-221ENST00000560842 PDE6GP18545 87 aa-0.21□□□□□ -2.44
PSMA4-221ENST00000560842 ARPP19P56211 112 aa-0.21□□□□□ -2.44
PSMA4-221ENST00000560842 QRFPP83859 136 aa-0.21□□□□□ -2.44
PSMA4-221ENST00000560842 C10orf99Q6UWK7 81 aa-0.21□□□□□ -2.44
PSMA4-221ENST00000560842 LRP1Q07954 4544 aaKnown RBP-0.22□□□□□ -2.44
PSMA4-221ENST00000560842 CXCL1P09341 107 aa-0.22□□□□□ -2.44
PSMA4-221ENST00000560842 MIR22HGQ0VDD5 57 aa-0.22□□□□□ -2.44
PSMA4-221ENST00000560842 ZNF714Q96N38 554 aa-0.22□□□□□ -2.44
PSMA4-221ENST00000560842 BOKQ9UMX3 212 aaPredicted RBP-0.22□□□□□ -2.44
PSMA4-221ENST00000560842 UHRF1BP1Q6BDS2 1440 aa-0.22□□□□□ -2.45
PSMA4-221ENST00000560842 CD109Q6YHK3 1445 aa-0.22□□□□□ -2.45
PSMA4-221ENST00000560842 ADGRL3Q9HAR2 1447 aa-0.22□□□□□ -2.45
PSMA4-221ENST00000560842 BCORL1Q5H9F3 1711 aa-0.23□□□□□ -2.45
PSMA4-221ENST00000560842 BANF1O75531 89 aa-0.23□□□□□ -2.45
PSMA4-221ENST00000560842 NDUFC2O95298 119 aa-0.23□□□□□ -2.45
PSMA4-221ENST00000560842 TRGC2P03986 189 aa-0.23□□□□□ -2.45
PSMA4-221ENST00000560842 IFNA6P05013 189 aa-0.23□□□□□ -2.45
PSMA4-221ENST00000560842 IFNA4P05014 189 aa-0.23□□□□□ -2.45
PSMA4-221ENST00000560842 IDO1P14902 403 aa-0.23□□□□□ -2.45
PSMA4-221ENST00000560842 RPL37AP61513 92 aaKnown RBP-0.23□□□□□ -2.45
PSMA4-221ENST00000560842 FADDQ13158 208 aa-0.23□□□□□ -2.45
PSMA4-221ENST00000560842 Q86TA4 180 aa-0.23□□□□□ -2.45
PSMA4-221ENST00000560842 C10orf111Q8N326 155 aa-0.23□□□□□ -2.45
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms