RNA–Protein interactions for RNA: ENST00000560448.5

PKNOX1-209, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 5

Gene PKNOX1, Length 1,429 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-209ENST00000560448 SLC25A22Q9H936 323 aa10.49□□□□□ -0.73
PKNOX1-209ENST00000560448 EIF3GO75821 320 aaKnown RBP eCLIP10.48□□□□□ -0.73
PKNOX1-209ENST00000560448 PPT1P50897 306 aa10.48□□□□□ -0.73
PKNOX1-209ENST00000560448 LYZP61626 148 aa10.48□□□□□ -0.73
PKNOX1-209ENST00000560448 C16orf54Q6UWD8 224 aa10.48□□□□□ -0.73
PKNOX1-209ENST00000560448 SVBPQ8N300 66 aa10.48□□□□□ -0.73
PKNOX1-209ENST00000560448 STPG3Q8N7X2 389 aa10.48□□□□□ -0.73
PKNOX1-209ENST00000560448 GPR82Q96P67 336 aa10.48□□□□□ -0.73
PKNOX1-209ENST00000560448 SEPSECSQ9HD40 501 aaKnown RBP10.48□□□□□ -0.73
PKNOX1-209ENST00000560448 NHLRC4P0CG21 123 aaPredicted RBP10.47□□□□□ -0.73
PKNOX1-209ENST00000560448 IGHV4-30-4P0DP06 118 aa10.47□□□□□ -0.73
PKNOX1-209ENST00000560448 BCL2P10415 239 aa10.47□□□□□ -0.73
PKNOX1-209ENST00000560448 CDC34P49427 236 aaPredicted RBP10.47□□□□□ -0.73
PKNOX1-209ENST00000560448 B2MP61769 119 aa10.47□□□□□ -0.73
PKNOX1-209ENST00000560448 GLMPQ8WWB7 406 aa10.47□□□□□ -0.73
PKNOX1-209ENST00000560448 C19orf73Q9NVV2 129 aa10.47□□□□□ -0.73
PKNOX1-209ENST00000560448 GNG13Q9P2W3 67 aa10.47□□□□□ -0.73
PKNOX1-209ENST00000560448 ELOA3CA0A087WX78 387 aaPredicted RBP10.46□□□□□ -0.74
PKNOX1-209ENST00000560448 IGHV3-49A0A0A0MS15 119 aa10.46□□□□□ -0.74
PKNOX1-209ENST00000560448 OR11H12B2RN74 326 aa10.46□□□□□ -0.74
PKNOX1-209ENST00000560448 DNASE2O00115 360 aaPredicted RBP10.46□□□□□ -0.74
PKNOX1-209ENST00000560448 APOHP02749 345 aaPredicted RBP10.46□□□□□ -0.74
PKNOX1-209ENST00000560448 CD7P09564 240 aa10.46□□□□□ -0.74
PKNOX1-209ENST00000560448 RPL11P62913 178 aaKnown RBP10.46□□□□□ -0.74
PKNOX1-209ENST00000560448 SIGLEC15Q6ZMC9 328 aa10.46□□□□□ -0.74
PKNOX1-209ENST00000560448 RXFP4Q8TDU9 374 aa10.46□□□□□ -0.74
PKNOX1-209ENST00000560448 NKX6-2Q9C056 277 aaPredicted RBP10.46□□□□□ -0.74
PKNOX1-209ENST00000560448 TUBA4BQ9H853 241 aa10.46□□□□□ -0.74
PKNOX1-209ENST00000560448 IGHV3OR16-13A0A075B7E8 117 aa10.45□□□□□ -0.74
PKNOX1-209ENST00000560448 IGHV3-74A0A0B4J1X5 117 aa10.45□□□□□ -0.74
PKNOX1-209ENST00000560448 HMGB3O15347 200 aaKnown RBP10.45□□□□□ -0.74
PKNOX1-209ENST00000560448 HYPMO75409 117 aa10.45□□□□□ -0.74
PKNOX1-209ENST00000560448 MS4A6AQ9H2W1 248 aa10.45□□□□□ -0.74
PKNOX1-209ENST00000560448 TMPRSS5Q9H3S3 457 aa10.45□□□□□ -0.74
PKNOX1-209ENST00000560448 A0A1W2PPV4 95 aa10.44□□□□□ -0.74
PKNOX1-209ENST00000560448 NDUFS6O75380 124 aaKnown RBP10.44□□□□□ -0.74
PKNOX1-209ENST00000560448 SNAPINO95295 136 aa10.44□□□□□ -0.74
PKNOX1-209ENST00000560448 IFNA1P01562 189 aa10.44□□□□□ -0.74
PKNOX1-209ENST00000560448 FRMD6-AS1P0C7T7 363 aa10.44□□□□□ -0.74
PKNOX1-209ENST00000560448 STAG3L2P0CL84 134 aa10.44□□□□□ -0.74
PKNOX1-209ENST00000560448 STAG3L3P0CL85 134 aa10.44□□□□□ -0.74
PKNOX1-209ENST00000560448 MEOX2P50222 304 aa10.44□□□□□ -0.74
PKNOX1-209ENST00000560448 BTN1A1Q13410 526 aa10.44□□□□□ -0.74
PKNOX1-209ENST00000560448 OR1B1Q8NGR6 318 aa10.44□□□□□ -0.74
PKNOX1-209ENST00000560448 NRN1Q9NPD7 142 aa10.44□□□□□ -0.74
PKNOX1-209ENST00000560448 VAX2Q9UIW0 290 aa10.44□□□□□ -0.74
PKNOX1-209ENST00000560448 HIGD1AQ9Y241 93 aa10.44□□□□□ -0.74
PKNOX1-209ENST00000560448 IGHV3-66A0A0C4DH42 116 aa10.43□□□□□ -0.74
PKNOX1-209ENST00000560448 ORM2P19652 201 aa10.43□□□□□ -0.74
PKNOX1-209ENST00000560448 GALR1P47211 349 aa10.43□□□□□ -0.74
PKNOX1-209ENST00000560448 OR8I2Q8N0Y5 310 aa10.43□□□□□ -0.74
PKNOX1-209ENST00000560448 CLRN3Q8NCR9 226 aa10.43□□□□□ -0.74
PKNOX1-209ENST00000560448 PFDN5Q99471 154 aa10.43□□□□□ -0.74
PKNOX1-209ENST00000560448 PRKDCP78527 4128 aaKnown RBP10.43□□□□□ -0.74
PKNOX1-209ENST00000560448 ZNF98A6NK75 572 aa10.42□□□□□ -0.74
PKNOX1-209ENST00000560448 K7EQG2 157 aa10.42□□□□□ -0.74
PKNOX1-209ENST00000560448 RPL7P18124 248 aaKnown RBP10.42□□□□□ -0.74
PKNOX1-209ENST00000560448 GATA2P23769 480 aaPredicted RBP10.42□□□□□ -0.74
PKNOX1-209ENST00000560448 TAGLN2P37802 199 aaKnown RBP10.42□□□□□ -0.74
PKNOX1-209ENST00000560448 PSMB3P49720 205 aa10.42□□□□□ -0.74
PKNOX1-209ENST00000560448 SNRPD3P62318 126 aaKnown RBP10.42□□□□□ -0.74
PKNOX1-209ENST00000560448 RHOBP62745 196 aa10.42□□□□□ -0.74
PKNOX1-209ENST00000560448 ODF3L2Q3SX64 289 aa10.42□□□□□ -0.74
PKNOX1-209ENST00000560448 SOHLH1Q5JUK2 328 aa10.42□□□□□ -0.74
PKNOX1-209ENST00000560448 SPATA31B1PQ5VZV4 182 aa10.42□□□□□ -0.74
PKNOX1-209ENST00000560448 CYB561D1Q8N8Q1 229 aa10.42□□□□□ -0.74
PKNOX1-209ENST00000560448 STXBP6Q8NFX7 210 aa10.42□□□□□ -0.74
PKNOX1-209ENST00000560448 OR1L4Q8NGR5 311 aa10.42□□□□□ -0.74
PKNOX1-209ENST00000560448 DCANP1Q8TF63 244 aa10.42□□□□□ -0.74
PKNOX1-209ENST00000560448 GATAD1Q8WUU5 269 aa10.42□□□□□ -0.74
PKNOX1-209ENST00000560448 SRD5A3Q9H8P0 318 aa10.42□□□□□ -0.74
PKNOX1-209ENST00000560448 MANBALQ9NQG1 85 aa10.42□□□□□ -0.74
PKNOX1-209ENST00000560448 FAM74A7A6NL05 159 aa10.41□□□□□ -0.74
PKNOX1-209ENST00000560448 H3BRN7 92 aa10.41□□□□□ -0.74
PKNOX1-209ENST00000560448 OR5G3P0C626 314 aa10.41□□□□□ -0.74
PKNOX1-209ENST00000560448 FAM74A3Q4VXF1 159 aa10.41□□□□□ -0.74
PKNOX1-209ENST00000560448 LINC00322Q6ZN03 302 aaPredicted RBP10.41□□□□□ -0.74
PKNOX1-209ENST00000560448 SHANK2-AS3Q9BTD1 123 aa10.41□□□□□ -0.74
PKNOX1-209ENST00000560448 SLC25A39Q9BZJ4 359 aaPredicted RBP10.41□□□□□ -0.74
PKNOX1-209ENST00000560448 IGKV3-7A0A075B6H7 116 aa10.41□□□□□ -0.74
PKNOX1-209ENST00000560448 CXorf1O96002 111 aa10.41□□□□□ -0.74
PKNOX1-209ENST00000560448 ARL14EPLP0DKL9 152 aa10.41□□□□□ -0.74
PKNOX1-209ENST00000560448 MEF2BQ02080 365 aaPredicted RBP10.41□□□□□ -0.74
PKNOX1-209ENST00000560448 GBGT1Q8N5D6 347 aa10.41□□□□□ -0.74
PKNOX1-209ENST00000560448 DEFB125Q8N687 156 aa10.41□□□□□ -0.74
PKNOX1-209ENST00000560448 MAP6D1Q9H9H5 199 aa10.41□□□□□ -0.74
PKNOX1-209ENST00000560448 FUT9Q9Y231 359 aa10.41□□□□□ -0.74
PKNOX1-209ENST00000560448 SELENOKQ9Y6D0 94 aa10.41□□□□□ -0.74
PKNOX1-209ENST00000560448 LOC102724200A0A096LPH7 203 aaPredicted RBP10.4□□□□□ -0.75
PKNOX1-209ENST00000560448 KIR2DL5BA0A0G2JN68 375 aa10.4□□□□□ -0.75
PKNOX1-209ENST00000560448 KIR2DL5BA0A0G2JPC4 375 aa10.4□□□□□ -0.75
PKNOX1-209ENST00000560448 COX7A2P2O60397 106 aa10.4□□□□□ -0.75
PKNOX1-209ENST00000560448 PAGE4O60829 102 aa10.4□□□□□ -0.75
PKNOX1-209ENST00000560448 GCHFRP30047 84 aa10.4□□□□□ -0.75
PKNOX1-209ENST00000560448 ID1P41134 155 aa10.4□□□□□ -0.75
PKNOX1-209ENST00000560448 TFPI2P48307 235 aa10.4□□□□□ -0.75
PKNOX1-209ENST00000560448 FAM78BQ5VT40 261 aa10.4□□□□□ -0.75
PKNOX1-209ENST00000560448 C10orf113Q5VZT2 155 aa10.4□□□□□ -0.75
PKNOX1-209ENST00000560448 MIR17HGQ75NE6 70 aa10.4□□□□□ -0.75
PKNOX1-209ENST00000560448 KIR2DL5AQ8N109 375 aa10.4□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms