RNA–Protein interactions for RNA: ENST00000560208.1

CRNDE-209, Transcript of colorectal neoplasia differentially expressed, humanhuman

TSL 2

Gene CRNDE, Length 735 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNDE-209ENST00000560208 LY6G6CO95867 125 aa16.92■□□□□ 0.3
CRNDE-209ENST00000560208 GIG44P09565 113 aaPredicted RBP16.92■□□□□ 0.3
CRNDE-209ENST00000560208 MORN3Q6PF18 240 aaPredicted RBP16.92■□□□□ 0.3
CRNDE-209ENST00000560208 SEPSECSQ9HD40 501 aaKnown RBP16.92■□□□□ 0.3
CRNDE-209ENST00000560208 G3V3Q6 166 aa16.91■□□□□ 0.3
CRNDE-209ENST00000560208 SPP1P10451 314 aa16.91■□□□□ 0.3
CRNDE-209ENST00000560208 PSMB3P49720 205 aa16.91■□□□□ 0.3
CRNDE-209ENST00000560208 DEFB1P60022 68 aa16.91■□□□□ 0.3
CRNDE-209ENST00000560208 IGFL4Q6B9Z1 124 aa16.91■□□□□ 0.3
CRNDE-209ENST00000560208 C11orf45Q8TAV5 145 aa16.91■□□□□ 0.3
CRNDE-209ENST00000560208 TNFSF18Q9UNG2 199 aa16.91■□□□□ 0.3
CRNDE-209ENST00000560208 RFNGQ9Y644 331 aa16.91■□□□□ 0.3
CRNDE-209ENST00000560208 ISLRO14498 428 aa16.9■□□□□ 0.3
CRNDE-209ENST00000560208 DEFB4AO15263 64 aa16.9■□□□□ 0.3
CRNDE-209ENST00000560208 NANOS2P60321 138 aaKnown RBP16.9■□□□□ 0.3
CRNDE-209ENST00000560208 TMEM41BQ5BJD5 291 aa16.9■□□□□ 0.3
CRNDE-209ENST00000560208 FFAR4Q5NUL3 377 aa16.9■□□□□ 0.3
CRNDE-209ENST00000560208 SAMD13Q5VXD3 122 aa16.9■□□□□ 0.3
CRNDE-209ENST00000560208 BPIFA4PQ86YQ2 179 aa16.9■□□□□ 0.3
CRNDE-209ENST00000560208 LRRC20Q8TCA0 184 aa16.9■□□□□ 0.3
CRNDE-209ENST00000560208 MFFQ9GZY8 342 aa16.9■□□□□ 0.3
CRNDE-209ENST00000560208 RNF222A6NCQ9 220 aa16.89■□□□□ 0.29
CRNDE-209ENST00000560208 H3BTX0 84 aa16.89■□□□□ 0.29
CRNDE-209ENST00000560208 MRPS12O15235 138 aaKnown RBP16.89■□□□□ 0.29
CRNDE-209ENST00000560208 ARPC5O15511 151 aa16.89■□□□□ 0.29
CRNDE-209ENST00000560208 FAM78BQ5VT40 261 aa16.89■□□□□ 0.29
CRNDE-209ENST00000560208 SPATA31B1PQ5VZV4 182 aa16.89■□□□□ 0.29
CRNDE-209ENST00000560208 C20orf173Q96LM9 149 aa16.89■□□□□ 0.29
CRNDE-209ENST00000560208 C4BPBP20851 252 aa16.88■□□□□ 0.29
CRNDE-209ENST00000560208 ZNF266Q14584 549 aa16.88■□□□□ 0.29
CRNDE-209ENST00000560208 Q6ZNX1 250 aa16.88■□□□□ 0.29
CRNDE-209ENST00000560208 HSD17B11Q8NBQ5 300 aa16.88■□□□□ 0.29
CRNDE-209ENST00000560208 PARD6GQ9BYG4 376 aaPredicted RBP16.88■□□□□ 0.29
CRNDE-209ENST00000560208 hCG_2014768A0A024R1R8 64 aa16.87■□□□□ 0.29
CRNDE-209ENST00000560208 A0A087X0K7 114 aa16.87■□□□□ 0.29
CRNDE-209ENST00000560208 MIR17HGQ75NE6 70 aa16.87■□□□□ 0.29
CRNDE-209ENST00000560208 RNF182Q8N6D2 247 aa16.87■□□□□ 0.29
CRNDE-209ENST00000560208 Q8NAQ8 132 aa16.87■□□□□ 0.29
CRNDE-209ENST00000560208 TRAV8-2A0A0B4J237 113 aa16.86■□□□□ 0.29
CRNDE-209ENST00000560208 HLA-DMBP28068 263 aa16.86■□□□□ 0.29
CRNDE-209ENST00000560208 GDF5OSQ5U4N7 250 aa16.86■□□□□ 0.29
CRNDE-209ENST00000560208 F6UB75 175 aa16.85■□□□□ 0.29
CRNDE-209ENST00000560208 IGKV3-20P01619 116 aa16.85■□□□□ 0.29
CRNDE-209ENST00000560208 RPRMQ9NS64 109 aa16.85■□□□□ 0.29
CRNDE-209ENST00000560208 H3BQ15 152 aa16.84■□□□□ 0.29
CRNDE-209ENST00000560208 PRB4P10163 310 aaPredicted RBP16.84■□□□□ 0.29
CRNDE-209ENST00000560208 RPL7L1Q6DKI1 246 aaKnown RBP16.84■□□□□ 0.29
CRNDE-209ENST00000560208 EBLN2Q6P2I7 272 aa16.84■□□□□ 0.29
CRNDE-209ENST00000560208 FOXI2Q6ZQN5 318 aa16.84■□□□□ 0.29
CRNDE-209ENST00000560208 ZNF738Q8NE65 137 aa16.84■□□□□ 0.29
CRNDE-209ENST00000560208 SLC25A2Q9BXI2 301 aa16.84■□□□□ 0.29
CRNDE-209ENST00000560208 SAV1Q9H4B6 383 aaPredicted RBP16.84■□□□□ 0.29
CRNDE-209ENST00000560208 CLEC5AQ9NY25 188 aa16.84■□□□□ 0.29
CRNDE-209ENST00000560208 IGHV4-28A0A0C4DH34 117 aa16.83■□□□□ 0.28
CRNDE-209ENST00000560208 ZNF705EA8MWA4 302 aaPredicted RBP16.83■□□□□ 0.28
CRNDE-209ENST00000560208 H3BMM0 161 aa16.83■□□□□ 0.28
CRNDE-209ENST00000560208 RBMY1A1P0DJD3 496 aaKnown RBP16.83■□□□□ 0.28
CRNDE-209ENST00000560208 RBMY1CP0DJD4 496 aa16.83■□□□□ 0.28
CRNDE-209ENST00000560208 IGLC2P0DOY2 106 aa16.83■□□□□ 0.28
CRNDE-209ENST00000560208 PYYP10082 97 aa16.83■□□□□ 0.28
CRNDE-209ENST00000560208 HLA-DRB4P13762 266 aa16.83■□□□□ 0.28
CRNDE-209ENST00000560208 MIFP14174 115 aa16.83■□□□□ 0.28
CRNDE-209ENST00000560208 RBMY1FQ15415 496 aaKnown RBP16.83■□□□□ 0.28
CRNDE-209ENST00000560208 LCN15Q6UWW0 184 aa16.83■□□□□ 0.28
CRNDE-209ENST00000560208 CSNK1G2-AS1Q8NCQ2 148 aa16.83■□□□□ 0.28
CRNDE-209ENST00000560208 OR4B1Q8NGF8 309 aa16.83■□□□□ 0.28
CRNDE-209ENST00000560208 MRPL32Q9BYC8 188 aaKnown RBP16.83■□□□□ 0.28
CRNDE-209ENST00000560208 FUT9Q9Y231 359 aa16.83■□□□□ 0.28
CRNDE-209ENST00000560208 TIMM9Q9Y5J7 89 aa16.83■□□□□ 0.28
CRNDE-209ENST00000560208 HLA-DRB4X5D2U9 266 aa16.83■□□□□ 0.28
CRNDE-209ENST00000560208 BORCS7-ASMTA0A0B4J1R7 106 aa16.82■□□□□ 0.28
CRNDE-209ENST00000560208 SLC17A3O00476 420 aa16.82■□□□□ 0.28
CRNDE-209ENST00000560208 ATP6V0CP27449 155 aa16.82■□□□□ 0.28
CRNDE-209ENST00000560208 ACOT6Q3I5F7 207 aaPredicted RBP16.82■□□□□ 0.28
CRNDE-209ENST00000560208 HRH4Q9H3N8 390 aa16.82■□□□□ 0.28
CRNDE-209ENST00000560208 ZNF586Q9NXT0 402 aa16.82■□□□□ 0.28
CRNDE-209ENST00000560208 X6R8D5 127 aa16.82■□□□□ 0.28
CRNDE-209ENST00000560208 KMT2AQ03164 3969 aa16.82■□□□□ 0.28
CRNDE-209ENST00000560208 BIRC6Q9NR09 4857 aa16.81■□□□□ 0.28
CRNDE-209ENST00000560208 EIF3GO75821 320 aaKnown RBP eCLIP16.81■□□□□ 0.28
CRNDE-209ENST00000560208 CXCL2P19875 107 aa16.81■□□□□ 0.28
CRNDE-209ENST00000560208 RAB2AP61019 212 aa16.81■□□□□ 0.28
CRNDE-209ENST00000560208 NUTF2P61970 127 aaKnown RBP16.81■□□□□ 0.28
CRNDE-209ENST00000560208 OR11H4Q8NGC9 324 aa16.81■□□□□ 0.28
CRNDE-209ENST00000560208 SLC50A1Q9BRV3 221 aa16.81■□□□□ 0.28
CRNDE-209ENST00000560208 ZNF331Q9NQX6 463 aaPredicted RBP16.81■□□□□ 0.28
CRNDE-209ENST00000560208 TMEM14CQ9P0S9 112 aa16.81■□□□□ 0.28
CRNDE-209ENST00000560208 ZNF705DP0CH99 300 aaPredicted RBP16.8■□□□□ 0.28
CRNDE-209ENST00000560208 ZNF705BP0CI00 300 aaPredicted RBP16.8■□□□□ 0.28
CRNDE-209ENST00000560208 PSG3Q16557 428 aa16.8■□□□□ 0.28
CRNDE-209ENST00000560208 FAM122CQ6P4D5 195 aa16.8■□□□□ 0.28
CRNDE-209ENST00000560208 BLNKQ8WV28 456 aa16.8■□□□□ 0.28
CRNDE-209ENST00000560208 FAM167A-AS1Q96KT0 104 aa16.8■□□□□ 0.28
CRNDE-209ENST00000560208 C1QTNF4Q9BXJ3 329 aa16.8■□□□□ 0.28
CRNDE-209ENST00000560208 SH3BGRL3Q9H299 93 aa16.8■□□□□ 0.28
CRNDE-209ENST00000560208 A0A0J9YX75 114 aa16.79■□□□□ 0.28
CRNDE-209ENST00000560208 OR7C2O60412 319 aa16.79■□□□□ 0.28
CRNDE-209ENST00000560208 HIST1H1EP10412 219 aaKnown RBP16.79■□□□□ 0.28
CRNDE-209ENST00000560208 FXYD7P58549 80 aa16.79■□□□□ 0.28
CRNDE-209ENST00000560208 RHOBP62745 196 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 250.6 ms